KCC004767A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC004767A_C01 KCC004767A_c01
gcacgaggccaccaagtgctgtaatgcgggttccatggtcaagtcgttgtcatcaaaata
cggctcgcgctgacgcgcttTGCCATGGATTTCCTGTAAGAGTCACGCCCCAGTTCCTTG
CCCAGTCCACCCGACGGCAAACGTCACCCAGGCAATTAAAGCTGCTCTGGATGAGGATGC
CGGGGACCGTGGCGACGTCACGACGCTAGCAACGATCCCCGAGTCAACACAAGCGACAGC
GACGTTTCTTGCAAAAGCAGATGGTGTCCTTGCCGGCCTGGGCGTTGCGGATGAGGTGTT
GGCGATAGTGGACCCCACCGTAAAGGTGGAGTGGCGGGCGTGTGACGGCGACAAGGTGGT
CAGCGGGCAGGTGCTGGGGGTGCTGCACGGCTCGGCTCGCTCCATCCTGTTGGTGGAGCG
CATCATGCTCAAATTCATGCAGAGGATGA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC004767A_C01 KCC004767A_c01
         (449 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

dbj|BAA92153.1| quinolinate phosphoribosyltransferase [Nicotiana...   114  2e-25
gb|AAM63914.1| NADC homolog [Arabidopsis thaliana]                    113  7e-25
emb|CAB59429.1| quinolinate phosphoribosyltransferase [Nicotiana...   113  7e-25
emb|CAB59430.1| quinolinate phosphoribosyltransferase [Nicotiana...   112  1e-24
ref|NP_565259.1| NADC homolog [Arabidopsis thaliana] gi|16323163...   110  6e-24

>dbj|BAA92153.1| quinolinate phosphoribosyltransferase [Nicotiana tabacum]
          Length = 351

 Score =  114 bits (286), Expect = 2e-25
 Identities = 55/109 (50%), Positives = 77/109 (70%)
 Frame = +2

Query: 122 PVHPTANVTQAIKAALDEDAGDRGDVTTLATIPESTQATATFLAKADGVLAGLGVADEVL 301
           P HPT ++ + +K AL EDAG+ GDVT  ATIP   ++ A FLAK DG++AG+ +A+ + 
Sbjct: 43  PAHPTYDLKEVMKLALSEDAGNLGDVTCKATIPLDMESDAHFLAKEDGIIAGIALAEMIF 102

Query: 302 AIVDPTVKVEWRACDGDKVVSGQVLGVLHGSARSILLVERIMLKFMQRM 448
           A VDP++KVEW   DGDKV  G   G + G+A +I++ ER++L FMQRM
Sbjct: 103 AEVDPSLKVEWYVNDGDKVHKGLKFGKVQGNAYNIVIAERVVLNFMQRM 151

>gb|AAM63914.1| NADC homolog [Arabidopsis thaliana]
          Length = 327

 Score =  113 bits (282), Expect = 7e-25
 Identities = 56/109 (51%), Positives = 73/109 (66%)
 Frame = +2

Query: 122 PVHPTANVTQAIKAALDEDAGDRGDVTTLATIPESTQATATFLAKADGVLAGLGVADEVL 301
           P HPT ++   IK ALDEDAG  GDVT +ATIP   +  A FLAK DG++AG+ +AD + 
Sbjct: 19  PSHPTYDLKAVIKLALDEDAGHTGDVTCMATIPFDMEVEAYFLAKEDGIVAGVALADMIF 78

Query: 302 AIVDPTVKVEWRACDGDKVVSGQVLGVLHGSARSILLVERIMLKFMQRM 448
             VDP++KVEW   DGD V  G   G + G+A  I++ ER++L FMQRM
Sbjct: 79  EHVDPSLKVEWMRKDGDYVHKGLKFGKVSGNAHKIVVAERVLLNFMQRM 127

>emb|CAB59429.1| quinolinate phosphoribosyltransferase [Nicotiana rustica]
          Length = 351

 Score =  113 bits (282), Expect = 7e-25
 Identities = 54/109 (49%), Positives = 77/109 (70%)
 Frame = +2

Query: 122 PVHPTANVTQAIKAALDEDAGDRGDVTTLATIPESTQATATFLAKADGVLAGLGVADEVL 301
           P HPT ++ + ++ AL EDAG+ GDVT  ATIP   ++ A FLAK DG++AG+ +A+ + 
Sbjct: 43  PAHPTYDLKEVMQLALSEDAGNLGDVTCKATIPLDMESDAHFLAKEDGIIAGIALAEMIF 102

Query: 302 AIVDPTVKVEWRACDGDKVVSGQVLGVLHGSARSILLVERIMLKFMQRM 448
           A VDP++KVEW   DGDKV  G   G + G+A +I++ ER++L FMQRM
Sbjct: 103 AEVDPSLKVEWYVNDGDKVHKGLKFGKVQGNAYNIVIAERVVLNFMQRM 151

>emb|CAB59430.1| quinolinate phosphoribosyltransferase [Nicotiana tabacum]
          Length = 351

 Score =  112 bits (279), Expect = 1e-24
 Identities = 54/109 (49%), Positives = 76/109 (69%)
 Frame = +2

Query: 122 PVHPTANVTQAIKAALDEDAGDRGDVTTLATIPESTQATATFLAKADGVLAGLGVADEVL 301
           P HPT ++   ++ AL EDAG+ GDVT  ATIP   ++ A FLAK DG++AG+ +A+ + 
Sbjct: 43  PAHPTYDLKGVMQLALSEDAGNLGDVTCKATIPVDMESDAHFLAKEDGIIAGIALAEMIF 102

Query: 302 AIVDPTVKVEWRACDGDKVVSGQVLGVLHGSARSILLVERIMLKFMQRM 448
           A VDP++KVEW   DGDKV  G   G + G+A +I++ ER++L FMQRM
Sbjct: 103 AEVDPSLKVEWYVNDGDKVHKGLKFGKVQGNAYNIVIAERVVLNFMQRM 151

>ref|NP_565259.1| NADC homolog [Arabidopsis thaliana] gi|16323163|gb|AAL15316.1|
           At2g01350/F10A8.23 [Arabidopsis thaliana]
           gi|20197586|gb|AAD14535.2| NADC homolog [Arabidopsis
           thaliana] gi|21436023|gb|AAM51589.1| At2g01350/F10A8.23
           [Arabidopsis thaliana] gi|26450814|dbj|BAC42515.1|
           putative nicotinate-nucleotide pyrophosphorylase
           [Arabidopsis thaliana]
          Length = 348

 Score =  110 bits (274), Expect = 6e-24
 Identities = 55/109 (50%), Positives = 72/109 (65%)
 Frame = +2

Query: 122 PVHPTANVTQAIKAALDEDAGDRGDVTTLATIPESTQATATFLAKADGVLAGLGVADEVL 301
           P HPT ++   IK AL EDAG  GDVT +ATIP   +  A FLAK DG++AG+ +AD + 
Sbjct: 40  PSHPTYDLKAVIKLALAEDAGHTGDVTCMATIPFDMEVEAYFLAKEDGIVAGVALADMIF 99

Query: 302 AIVDPTVKVEWRACDGDKVVSGQVLGVLHGSARSILLVERIMLKFMQRM 448
             VDP++KVEW   DGD V  G   G + G+A  I++ ER++L FMQRM
Sbjct: 100 EHVDPSLKVEWMRKDGDYVHKGLKFGKVSGNAHKIVVAERVLLNFMQRM 148



EST assemble image


clone accession position
1 CM084h03_r AV392623 1 405
2 MX248a12_r BP091995 50 449




Chlamydomonas reinhardtii
Kazusa DNA Research Institute