Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC004642A_C01 KCC004642A_c01
(435 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_210845.1| hypothetical protein XP_210845 [Homo sapiens] 44 4e-04
ref|ZP_00061570.1| COG0543: 2-polyprenylphenol hydroxylase and r... 35 0.31
ref|NP_623986.1| Na+/melibiose symporter and related transporter... 33 0.90
ref|NP_521173.1| PROBABLE ATP:GLYCEROL 3-PHOSPHOTRANSFERASE PROT... 32 2.0
dbj|BAB71676.1| unnamed protein product [Homo sapiens] 31 3.4
>ref|XP_210845.1| hypothetical protein XP_210845 [Homo sapiens]
Length = 90
Score = 44.3 bits (103), Expect = 4e-04
Identities = 18/41 (43%), Positives = 24/41 (57%)
Frame = -3
Query: 337 CWIMGVRRNVDHGSGSNDGFCLPCASKFTFNVVWVACVPPA 215
CW G+ V HG GS +C PC S+FT +W+ CV P+
Sbjct: 8 CWRWGLVGGVCHGGGSLMAWCCPCDSEFTSCEIWLKCVAPS 48
>ref|ZP_00061570.1| COG0543: 2-polyprenylphenol hydroxylase and related flavodoxin
oxidoreductases [Clostridium thermocellum ATCC 27405]
Length = 102
Score = 34.7 bits (78), Expect = 0.31
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Frame = -2
Query: 245 CGVG----CLCTTGLL*SWPYSRV*KRGPCWFCWSDDGLL 138
CG+G C C TG +W YS V K GP + WSD+ +L
Sbjct: 63 CGIGACLVCACKTGKPDNWEYSHVCKDGPVF--WSDEVIL 100
>ref|NP_623986.1| Na+/melibiose symporter and related transporters
[Thermoanaerobacter tengcongensis]
gi|20517465|gb|AAM25590.1| Na+/melibiose symporter and
related transporters [Thermoanaerobacter tengcongensis]
Length = 434
Score = 33.1 bits (74), Expect = 0.90
Identities = 14/41 (34%), Positives = 23/41 (55%)
Frame = +2
Query: 11 LDFFFFFFANTCIPYEALVPSVSVSSGKRAIIAITNAMSQI 133
L FF F PY AL+P ++ S+G+R + + ++QI
Sbjct: 123 LSLFFVAFTAVVAPYLALIPEITKSAGERITLTMMQGITQI 163
>ref|NP_521173.1| PROBABLE ATP:GLYCEROL 3-PHOSPHOTRANSFERASE PROTEIN [Ralstonia
solanacearum] gi|24636883|sp|Q8XUY1|GLPK_RALSO Glycerol
kinase (ATP:glycerol 3-phosphotransferase)
(Glycerokinase) (GK) gi|17430076|emb|CAD16761.1|
PROBABLE ATP:GLYCEROL 3-PHOSPHOTRANSFERASE PROTEIN
[Ralstonia solanacearum]
Length = 498
Score = 32.0 bits (71), Expect = 2.0
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = -3
Query: 412 VNGWLGWQHTRAKLHGRDMQVASRT 338
++ WL WQ TR +LH D+ ASRT
Sbjct: 163 IDSWLVWQLTRGRLHVTDVSNASRT 187
>dbj|BAB71676.1| unnamed protein product [Homo sapiens]
Length = 209
Score = 31.2 bits (69), Expect = 3.4
Identities = 38/129 (29%), Positives = 50/129 (38%), Gaps = 19/129 (14%)
Frame = +3
Query: 93 NVPSLQSQMPCPKFNQQTV--ITPAKPTWAAFLYAAVRPAS**AGGTQATHT-------- 242
N PS S +P P T I +P ++ L++ P GT AT
Sbjct: 14 NGPSSDSGVPEPAVCMVTTAAIDIHQPNISSDLFSLDMPLKLGGNGTSATSESASHSSVT 73
Query: 243 --------TLKVNLDAH-GRQNPSFEPDPWSTFLRTPMIQQVREATCMSLPCSLALVCCQ 395
TL ++D R+ PS EP P + L P QQV EAT L SL+ C
Sbjct: 74 RAQSDSSQTLGSSMDCSTAREEPSSEPGP--SPLPLPSQQQVEEATVQDLLSSLSEDPCP 131
Query: 396 PSQPLTAQP 422
+ L P
Sbjct: 132 SQKALDPAP 140
