Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC004051A_C01 KCC004051A_c01
(842 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_567521.1| ATP-dependent Clp protease proteolytic subunit ... 146 5e-34
gb|AAL91164.1| unknown protein [Arabidopsis thaliana] gi|2319768... 146 5e-34
ref|NP_488398.1| ATP-dependent Clp protease proteolytic subunit ... 119 8e-26
ref|NP_875778.1| Protease subunit of ATP-dependent Clp protease ... 115 7e-25
ref|NP_113273.1| ATP-dependent Clp protease proteolytic subunit ... 115 9e-25
>ref|NP_567521.1| ATP-dependent Clp protease proteolytic subunit (ClpR4), putative
[Arabidopsis thaliana] gi|21593086|gb|AAM65035.1|
ATP-dependent Clp protease proteolytic subunit ClpR4,
putative [Arabidopsis thaliana]
gi|26450085|dbj|BAC42162.1| putative ClpP protease
complex subunit ClpR4 [Arabidopsis thaliana]
Length = 305
Score = 146 bits (368), Expect = 5e-34
Identities = 83/179 (46%), Positives = 116/179 (64%), Gaps = 4/179 (2%)
Frame = +2
Query: 2 VAELLTAQ-LFVLVQEAPDPIFFYINSTGIAKSTTKFGNEHEAIAVYSMMKGVQKYCPIY 178
V EL+ A+ L++ ++ PI+ YINSTG K+ K G + EA A+Y +M V+ PI+
Sbjct: 126 VTELILAEFLYLQYEDEEKPIYLYINSTGTTKNGEKLGYDTEAFAIYDVMGYVKP--PIF 183
Query: 179 TLCVGNAFGEAALLLSAGSPGKRAALRSSTIMLRQPLQRLGGMQASDIDIYRKITREKNA 358
TLCVGNA+GEAALLL+AG+ G R+AL SSTIM++QP+ R G QA+D++I RK +
Sbjct: 184 TLCVGNAWGEAALLLTAGAKGNRSALPSSTIMIKQPIARFQG-QATDVEIARKEIKHIKT 242
Query: 359 TMAKYLAACTKKTEEQIMTDFNRPRYFNPYEAVSYGLIDTVL---EPKEERAVFKDWEK 526
M K + K+ EQI D RP+YF+P EAV YG+ID V+ ++R V D +K
Sbjct: 243 EMVKLYSKHIGKSPEQIEADMKRPKYFSPTEAVEYGIIDKVVYNERGSQDRGVVSDLKK 301
>gb|AAL91164.1| unknown protein [Arabidopsis thaliana] gi|23197684|gb|AAN15369.1|
unknown protein [Arabidopsis thaliana]
Length = 305
Score = 146 bits (368), Expect = 5e-34
Identities = 83/179 (46%), Positives = 116/179 (64%), Gaps = 4/179 (2%)
Frame = +2
Query: 2 VAELLTAQ-LFVLVQEAPDPIFFYINSTGIAKSTTKFGNEHEAIAVYSMMKGVQKYCPIY 178
V EL+ A+ L++ ++ PI+ YINSTG K+ K G + EA A+Y +M V+ PI+
Sbjct: 126 VTELILAEFLYLQYEDEKKPIYLYINSTGTTKNGEKLGYDTEAFAIYDVMGYVKP--PIF 183
Query: 179 TLCVGNAFGEAALLLSAGSPGKRAALRSSTIMLRQPLQRLGGMQASDIDIYRKITREKNA 358
TLCVGNA+GEAALLL+AG+ G R+AL SSTIM++QP+ R G QA+D++I RK +
Sbjct: 184 TLCVGNAWGEAALLLTAGAKGNRSALPSSTIMIKQPIARFQG-QATDVEIARKEIKHIKT 242
Query: 359 TMAKYLAACTKKTEEQIMTDFNRPRYFNPYEAVSYGLIDTVL---EPKEERAVFKDWEK 526
M K + K+ EQI D RP+YF+P EAV YG+ID V+ ++R V D +K
Sbjct: 243 EMVKLYSKHIGKSPEQIEADMKRPKYFSPTEAVEYGIIDKVVYNERGSQDRGVVSDLKK 301
>ref|NP_488398.1| ATP-dependent Clp protease proteolytic subunit [Nostoc sp. PCC
7120] gi|17133494|dbj|BAB76057.1| ATP-dependent Clp
protease proteolytic subunit [Nostoc sp. PCC 7120]
Length = 220
Score = 119 bits (297), Expect = 8e-26
Identities = 75/167 (44%), Positives = 98/167 (57%), Gaps = 2/167 (1%)
Frame = +2
Query: 2 VAELLTAQLFVLVQEAPD-PIFFYINSTGIAK-STTKFGNEHEAIAVYSMMKGVQKYCPI 175
V EL+ AQL L + PD PI YINSTG + S G E EA A+Y MK ++ PI
Sbjct: 46 VTELIVAQLLYLQSDDPDKPIKIYINSTGTSGYSGEPIGFETEAFAIYDTMKYIKP--PI 103
Query: 176 YTLCVGNAFGEAALLLSAGSPGKRAALRSSTIMLRQPLQRLGGMQASDIDIYRKITREKN 355
+T+C+G+A G AA+LLSAG+ G RA+L SS+I+L QP G QA+DI I +
Sbjct: 104 HTICIGSAMGMAAMLLSAGTKGCRASLPSSSIILHQPKSYAQG-QATDIQIRAREVLVNK 162
Query: 356 ATMAKYLAACTKKTEEQIMTDFNRPRYFNPYEAVSYGLIDTVLEPKE 496
+M A T + E+I D +R Y PY+A YGLID V E +E
Sbjct: 163 GSMVDIFARTTGQAPEKITKDMDRLLYMTPYQAKDYGLIDRVFEKEE 209
>ref|NP_875778.1| Protease subunit of ATP-dependent Clp protease [Prochlorococcus
marinus subsp. marinus str. CCMP1375]
gi|33238365|gb|AAQ00431.1| Protease subunit of
ATP-dependent Clp protease [Prochlorococcus marinus
subsp. marinus str. CCMP1375]
Length = 221
Score = 115 bits (289), Expect = 7e-25
Identities = 72/168 (42%), Positives = 99/168 (58%), Gaps = 2/168 (1%)
Frame = +2
Query: 2 VAELLTAQLFVLVQEAPD-PIFFYINSTGIAKST-TKFGNEHEAIAVYSMMKGVQKYCPI 175
V EL+ AQL L + P+ PI+FYINSTG + T G E EA A+ + ++ PI
Sbjct: 51 VTELIIAQLLFLEFDNPEKPIYFYINSTGTSWHTGDAIGFETEAFAICDTISYIKP--PI 108
Query: 176 YTLCVGNAFGEAALLLSAGSPGKRAALRSSTIMLRQPLQRLGGMQASDIDIYRKITREKN 355
+T+C+G A G AA++LS GS G RAAL ++I+L QP G QA+DI I K
Sbjct: 109 HTICIGQAMGTAAVILSGGSKGHRAALPHASIVLHQPRSGASG-QATDIQIRAKEVIHNK 167
Query: 356 ATMAKYLAACTKKTEEQIMTDFNRPRYFNPYEAVSYGLIDTVLEPKEE 499
M + L+ T K+ Q+ D +R Y NP+EAV YGLID VL +++
Sbjct: 168 QAMLEILSKNTGKSVSQLSKDSDRMSYLNPHEAVEYGLIDRVLTSRKD 215
>ref|NP_113273.1| ATP-dependent Clp protease proteolytic subunit [Guillardia theta]
gi|25289870|pir||F90087 ATP-dependent Clp protease
proteolytic subunit [imported] - Guillardia theta
nucleomorph gi|13794458|gb|AAK39833.1|AF165818_41
ATP-dependent Clp protease proteolytic subunit
[Guillardia theta]
Length = 254
Score = 115 bits (288), Expect = 9e-25
Identities = 65/168 (38%), Positives = 104/168 (61%), Gaps = 2/168 (1%)
Frame = +2
Query: 2 VAELLTAQ-LFVLVQEAPDPIFFYINSTGIAKST-TKFGNEHEAIAVYSMMKGVQKYCPI 175
V EL+ A+ L++ + + P++ Y+NSTG + + G E EA A+ M ++ P+
Sbjct: 80 VTELIVAEFLYLQYENSEKPVYMYLNSTGTSNPDGSSAGFETEAFAIADTMNYIKP--PV 137
Query: 176 YTLCVGNAFGEAALLLSAGSPGKRAALRSSTIMLRQPLQRLGGMQASDIDIYRKITREKN 355
+T+CVG AFG A+LLS+G PG+RAAL ++TIM+ QP R G QASDI I +
Sbjct: 138 HTICVGQAFGTCAMLLSSGEPGQRAALPNATIMIHQPTSRARG-QASDIAIKAREVLYNR 196
Query: 356 ATMAKYLAACTKKTEEQIMTDFNRPRYFNPYEAVSYGLIDTVLEPKEE 499
+ LA + ++ E++M D +R +Y +P EAV YG+ID +L+ +++
Sbjct: 197 KQCFEILAETSGQSLEKVMKDASRTKYLSPMEAVEYGIIDRILDTQKK 244
