Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003511A_C01 KCC003511A_c01
(413 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T44768 antifreeze glycopeptide AFGP polyprotein precursor [... 45 2e-04
gb|AAK58435.1| glycoprotein gp2 [Equine herpesvirus 4] 43 0.001
ref|NP_639237.1| histone H1 [Xanthomonas campestris pv. campestr... 42 0.002
ref|ZP_00092324.1| COG0654: 2-polyprenyl-6-methoxyphenol hydroxy... 40 0.006
ref|ZP_00047251.1| COG0532: Translation initiation factor 2 (IF-... 40 0.008
>pir||T44768 antifreeze glycopeptide AFGP polyprotein precursor [imported] -
Boreogadus saida gi|2078483|gb|AAC60129.1| antifreeze
glycopeptide AFGP polyprotein precursor
Length = 507
Score = 45.1 bits (105), Expect = 2e-04
Identities = 37/135 (27%), Positives = 52/135 (38%), Gaps = 1/135 (0%)
Frame = +2
Query: 8 ATLHSMSTSNTPGKTAMAPTARTYAAVLAASLSPSPSTKVTKKARIETAVTGTVAFATAG 187
AT + +T+ TP A A T T A + + +P+T T TA T ATA
Sbjct: 38 ATAATPATAATPATAATAATEATAATAATPATAATPATAATAATTAATAATA----ATAA 93
Query: 188 SPLKDGAQKRTEQAAQPAESQIVMDLTNSDDEAGPVKTA-PVPKAVAKARTISAMLMSAA 364
+P + AA PA + + P + A P A A +AA
Sbjct: 94 TPARAARAATPATAATPATAATAATAATAATAETPARAATPATAATPATAATPATAATAA 153
Query: 365 RGAGTRTVAPTAKAA 409
A + T A A+AA
Sbjct: 154 TAATSATAATAARAA 168
Score = 40.8 bits (94), Expect = 0.004
Identities = 42/143 (29%), Positives = 54/143 (37%), Gaps = 9/143 (6%)
Frame = +2
Query: 8 ATLHSMSTSNTPGKTAMAPTARTYAAVLAASLSPSPSTKVTKKARIETAVTGTVA----- 172
AT + +T+ TP A A TA T A A+ + +P+T T A T A
Sbjct: 228 ATAPTPATAATPATAATAATAPTAATPARAARAATPATAATLATAATPATPATPATAATD 287
Query: 173 --FATAGSPLKDGAQKRTEQAAQPAESQIVMDLTNSDDEAGPVKTAPVPKAVAKART--I 340
ATA +P + AA PA A TA P A+A T
Sbjct: 288 ATAATAATPARAATPATPATAATPATPATAATAAT----AATAATAATPARAARAATPAT 343
Query: 341 SAMLMSAARGAGTRTVAPTAKAA 409
+A +AA A T A A AA
Sbjct: 344 AATPATAATAATAATAATAATAA 366
Score = 40.8 bits (94), Expect = 0.004
Identities = 44/144 (30%), Positives = 56/144 (38%), Gaps = 10/144 (6%)
Frame = +2
Query: 8 ATLHSMSTSNTPGKTAMAPTARTYAAVLAASLSPSPSTKVT--------KKARIETAVTG 163
AT + +T+ TP A A TA T A A+ + +P+T T + AR T T
Sbjct: 135 ATAATPATAATPATAATAATAATSATAATAARAATPATAATPATPATAARAARAATPATA 194
Query: 164 TVAFATAGSPLKDGAQKRTEQAAQPAESQIVMDLTNSDDEAGPVKTAPVPKAVAKART-- 337
A ATA + AA PA + + A TA P A A T
Sbjct: 195 ATA-ATAATAATAATAATAATAATPARAARAATPATAPTPA----TAATPATAATAATAP 249
Query: 338 ISAMLMSAARGAGTRTVAPTAKAA 409
+A AAR A T A A AA
Sbjct: 250 TAATPARAARAATPATAATLATAA 273
Score = 37.7 bits (86), Expect = 0.038
Identities = 37/130 (28%), Positives = 50/130 (38%), Gaps = 1/130 (0%)
Frame = +2
Query: 26 STSNTPGKTAMAPTARTYAAVLAASLSPSPSTKVTKKARIETAVTGTVAFATAGSPLKDG 205
+T+ TP A A TA T A + + +P+T T A T A A +
Sbjct: 105 ATAATPATAATAATAATAATAETPARAATPATAATPATAATPATAATAATAATSATAATA 164
Query: 206 AQKRT-EQAAQPAESQIVMDLTNSDDEAGPVKTAPVPKAVAKARTISAMLMSAARGAGTR 382
A+ T AA PA + A A P A A T +A +AA A
Sbjct: 165 ARAATPATAATPA----------TPATAARAARAATPATAATAAT-AATAATAATAATAA 213
Query: 383 TVAPTAKAAK 412
T A A+AA+
Sbjct: 214 TAATPARAAR 223
>gb|AAK58435.1| glycoprotein gp2 [Equine herpesvirus 4]
Length = 240
Score = 42.7 bits (99), Expect = 0.001
Identities = 38/140 (27%), Positives = 52/140 (37%), Gaps = 5/140 (3%)
Frame = +2
Query: 8 ATLHSMSTSNTPGKTAMAPTARTYAAVL--AASLSPSPSTKVTKKARIETAVTGTVAFAT 181
A + +TS TA TA T A AA+ + + ST T A TA T T A +T
Sbjct: 67 AATTTAATSTAATSTAATTTAATTTAATTTAATTTAATSTAATSTAATSTAATSTAATST 126
Query: 182 AGSPLKDGAQKRTEQAAQPAESQ---IVMDLTNSDDEAGPVKTAPVPKAVAKARTISAML 352
A + T AA P ES + T +D A + S
Sbjct: 127 AATTTAATTTAATTTAATPTESSEASSTLAATTADTTADTTADTTADTTATTTTSGSTAA 186
Query: 353 MSAARGAGTRTVAPTAKAAK 412
+ + + T T+APT K
Sbjct: 187 NTTSTTSATVTIAPTTFTTK 206
>ref|NP_639237.1| histone H1 [Xanthomonas campestris pv. campestris str. ATCC 33913]
gi|21115151|gb|AAM43119.1| histone H1 [Xanthomonas
campestris pv. campestris str. ATCC 33913]
Length = 259
Score = 42.0 bits (97), Expect = 0.002
Identities = 45/140 (32%), Positives = 59/140 (42%), Gaps = 6/140 (4%)
Frame = +2
Query: 8 ATLHSMSTSNTPGKTAMAPTART----YAAVLAASLSPSPSTKVTKKARIETAVTGTVAF 175
A H + T+ K +A T T A AA+ STK T K ++ETA A
Sbjct: 97 AAKHKIGTTAATAKRKIAGTTATAKKKIATTKAAAKQKIASTKATTKLKLETAKANAKAE 156
Query: 176 ATAGSPLKDGAQKRTEQAAQPAESQIVMDLTNSDDEAGPVKTAPVPKAVAK--ARTISAM 349
A A S K A K +AA + T S + VK+ V KA+AK A+ A
Sbjct: 157 AAALS-TKTAASKAARKAA------VATAGTRSAAKKAQVKSVAVKKAIAKKIAKKAPAA 209
Query: 350 LMSAARGAGTRTVAPTAKAA 409
+A R + AP KAA
Sbjct: 210 KQTATRQVAVKK-APLKKAA 228
>ref|ZP_00092324.1| COG0654: 2-polyprenyl-6-methoxyphenol hydroxylase and related
FAD-dependent oxidoreductases [Azotobacter vinelandii]
Length = 698
Score = 40.4 bits (93), Expect = 0.006
Identities = 44/135 (32%), Positives = 52/135 (37%), Gaps = 14/135 (10%)
Frame = -2
Query: 406 GLGGGRH----SASASAARGRHQHGTDGARLC----------HGLGNRRRLHGARLIVTV 269
G G G H A A+A RGR G + HG RRRL R +
Sbjct: 173 GHGAGDHRRTGGAGAAARRGRRTDRRRGLQALLHAPCRSLAGHGRARRRRLQDRRSVAPA 232
Query: 268 RQVHDDL*LSGLSSLLRALLSPVLQGGSRSCESHSAGHCSFNPSLLSDLGRR*RRQRRR* 89
R HDD +G L R +R +H G C + L D RR R Q RR
Sbjct: 233 RTGHDDDRRAG--HLYRRRQRQGRAEMARHRRAH-RGRCGSHRVRLRDPHRR-RAQERRR 288
Query: 88 DSGVGARRRRHGGLA 44
D G R R GGL+
Sbjct: 289 DRGTDGRDTRPGGLS 303
>ref|ZP_00047251.1| COG0532: Translation initiation factor 2 (IF-2; GTPase)
[Lactobacillus gasseri]
Length = 479
Score = 40.0 bits (92), Expect = 0.008
Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 5/114 (4%)
Frame = +2
Query: 11 TLHSMSTSNTPGKTAMAPTARTYAAVLAASLSPSPSTKVTKKAR----IETAV-TGTVAF 175
T ++ +T+ +T P A+T A A +P + VT KA+ ++T V T T+
Sbjct: 20 TANNAATNKQVSQTVKTPVAQTQQAKSQAPAAPVKTATVTVKAKSAAEVKTPVQTNTLNV 79
Query: 176 ATAGSPLKDGAQKRTEQAAQPAESQIVMDLTNSDDEAGPVKTAPVPKAVAKART 337
T + Q T A PA+ ++ ++ ++ P KT PV A K T
Sbjct: 80 KTENKVAQPVKQLATSLAVAPAKKEVKKEVIKAE----PAKTTPVKAASTKVET 129
