Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003506A_C01 KCC003506A_c01
(406 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC85778.1| unnamed protein product [Homo sapiens] 35 0.25
ref|NP_671704.2| heparan sulfate 6-O-sulfotransferase 2 isoform ... 33 0.72
pir||A86240 protein F20B24.10 [imported] - Arabidopsis thaliana ... 33 1.2
gb|EAA39383.1| GLP_336_35545_37602 [Giardia lamblia ATCC 50803] 32 2.1
ref|NP_810322.1| conserved hypothetical protein [Bacteroides the... 32 2.1
>dbj|BAC85778.1| unnamed protein product [Homo sapiens]
Length = 169
Score = 35.0 bits (79), Expect = 0.25
Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Frame = +1
Query: 16 TQQMANNLQRQGRSARPVERRSYCTDGRLRV*RSAPAPP-AMCFRVT*VGHFLLQSCRES 192
T Q+ ++L QGRS RP+ R TDG L S P + R+ +G +CR
Sbjct: 84 TDQVPHSLGLQGRSRRPLTLREALTDGALPRLASTPRQRLPIAVRLPGIGPAATPACRPR 143
Query: 193 GIQIIFQAENT-CTCGDAVCVIC 258
G + E T TC A+ C
Sbjct: 144 GTVALPVPEGTRDTCSTAIPYTC 166
>ref|NP_671704.2| heparan sulfate 6-O-sulfotransferase 2 isoform S [Homo sapiens]
gi|16552186|dbj|BAB71260.1| unnamed protein product
[Homo sapiens]
Length = 605
Score = 33.5 bits (75), Expect = 0.72
Identities = 30/112 (26%), Positives = 45/112 (39%), Gaps = 5/112 (4%)
Frame = -1
Query: 334 ARDASNLQLPNHGSLARLIGRGVPRGISHTLHHRMCMCSRPEKLFEYQTRDMTGAKNAPL 155
+R + L GS+A + G PRG+SH H R + +P K + + GA APL
Sbjct: 32 SRVEAELAASRPGSVAASVRAGPPRGVSHGFHTRP-LLDKPRK----ASSSLAGAACAPL 86
Query: 154 MS-----HENTWRVVRARIVTHAIYRRYSNSGVRPAAHSCPAVANCLPSAGF 14
+ V+R R ++ R G+ HS V + S F
Sbjct: 87 FALLSRGRRRRMHVLRRRWDLGSLCRALLTRGLAALGHSLKHVLGAIFSKIF 138
>pir||A86240 protein F20B24.10 [imported] - Arabidopsis thaliana
gi|6573736|gb|AAF17656.1|AC009398_5 F20B24.10
[Arabidopsis thaliana]
Length = 409
Score = 32.7 bits (73), Expect = 1.2
Identities = 18/57 (31%), Positives = 27/57 (46%), Gaps = 2/57 (3%)
Frame = -2
Query: 261 AAYHTHCITACACVLGLKNYL--NTRLAT*LEQKMPHSCHTKTHGGWCGRGSSHTQS 97
A H C A V+ LKNYL + + +++PH T HG + SH++S
Sbjct: 344 AVMHIPCFAVFALVIKLKNYLLQQRHNSFFVHERIPHMEETMVHGHGQSQSQSHSES 400
>gb|EAA39383.1| GLP_336_35545_37602 [Giardia lamblia ATCC 50803]
Length = 685
Score = 32.0 bits (71), Expect = 2.1
Identities = 19/71 (26%), Positives = 32/71 (44%), Gaps = 3/71 (4%)
Frame = -2
Query: 324 PATCSFLITEASQDSSDGASHAAYHTHCITACACVLG---LKNYLNTRLAT*LEQKMPHS 154
P+TC +++ ++G CAC G ++ + NTR A L+ +P S
Sbjct: 452 PSTCGGTPSDSGTYCNNGLGTCLQQLDNSYLCACPAGYRGVETHGNTRAAAGLDGCVPWS 511
Query: 153 CHTKTHGGWCG 121
C+ +G CG
Sbjct: 512 CYPMLNGSICG 522
>ref|NP_810322.1| conserved hypothetical protein [Bacteroides thetaiotaomicron
VPI-5482] gi|29338716|gb|AAO76516.1| conserved
hypothetical protein [Bacteroides thetaiotaomicron
VPI-5482]
Length = 308
Score = 32.0 bits (71), Expect = 2.1
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = -2
Query: 207 NYLNTRLAT*LEQ---KMPHSCHTKTHGGWCGRGSSHTQ 100
N+L+T A L + K+ CH K GG CG SSH +
Sbjct: 261 NHLHTSSAADLSEAILKLKSDCHLKIFGGCCGTDSSHME 299
