Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003503A_C01 KCC003503A_c01
(363 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_850206.1| transducin / WD-40 repeat protein family [Arabi... 74 4e-13
ref|NP_850207.1| transducin / WD-40 repeat protein family [Arabi... 74 4e-13
pir||C84744 probable PRP19-like spliceosomal protein [imported] ... 74 4e-13
ref|NP_563708.1| transducin / WD-40 repeat protein family [Arabi... 70 1e-11
gb|AAK27816.1|AC022457_19 putative WD-repeat containing protein ... 69 1e-11
>ref|NP_850206.1| transducin / WD-40 repeat protein family [Arabidopsis thaliana]
Length = 565
Score = 74.3 bits (181), Expect = 4e-13
Identities = 33/54 (61%), Positives = 45/54 (83%)
Frame = +1
Query: 196 MFCSISGTVPEQGVVSTKSGHLFEKSLIEKYVRETGKCPVTGEPLSTEDLLPLK 357
M C+ISG VP + VVSTKSG LFE+ LIE+++ + GKCPVTGEPL+ +D++P+K
Sbjct: 1 MNCAISGEVPVEPVVSTKSGLLFERRLIERHISDYGKCPVTGEPLTIDDIVPIK 54
>ref|NP_850207.1| transducin / WD-40 repeat protein family [Arabidopsis thaliana]
Length = 537
Score = 74.3 bits (181), Expect = 4e-13
Identities = 33/54 (61%), Positives = 45/54 (83%)
Frame = +1
Query: 196 MFCSISGTVPEQGVVSTKSGHLFEKSLIEKYVRETGKCPVTGEPLSTEDLLPLK 357
M C+ISG VP + VVSTKSG LFE+ LIE+++ + GKCPVTGEPL+ +D++P+K
Sbjct: 1 MNCAISGEVPVEPVVSTKSGLLFERRLIERHISDYGKCPVTGEPLTIDDIVPIK 54
>pir||C84744 probable PRP19-like spliceosomal protein [imported] - Arabidopsis
thaliana gi|2459417|gb|AAB80652.1| putative PRP19-like
spliceosomal protein [Arabidopsis thaliana]
Length = 540
Score = 74.3 bits (181), Expect = 4e-13
Identities = 33/54 (61%), Positives = 45/54 (83%)
Frame = +1
Query: 196 MFCSISGTVPEQGVVSTKSGHLFEKSLIEKYVRETGKCPVTGEPLSTEDLLPLK 357
M C+ISG VP + VVSTKSG LFE+ LIE+++ + GKCPVTGEPL+ +D++P+K
Sbjct: 1 MNCAISGEVPVEPVVSTKSGLLFERRLIERHISDYGKCPVTGEPLTIDDIVPIK 54
>ref|NP_563708.1| transducin / WD-40 repeat protein family [Arabidopsis thaliana]
gi|14532632|gb|AAK64044.1| putative pre-mRNA splicing
factor PRP19 [Arabidopsis thaliana]
gi|23296618|gb|AAN13133.1| putative pre-mRNA splicing
factor PRP19 [Arabidopsis thaliana]
Length = 523
Score = 69.7 bits (169), Expect = 1e-11
Identities = 31/54 (57%), Positives = 43/54 (79%)
Frame = +1
Query: 196 MFCSISGTVPEQGVVSTKSGHLFEKSLIEKYVRETGKCPVTGEPLSTEDLLPLK 357
M C+ISG VPE+ VVS KSG L+EK LI+ ++ + GKCPVTGEP + +D++P+K
Sbjct: 1 MNCAISGEVPEEPVVSKKSGLLYEKRLIQTHISDYGKCPVTGEPHTLDDIVPIK 54
>gb|AAK27816.1|AC022457_19 putative WD-repeat containing protein [Oryza sativa (japonica
cultivar-group)] gi|31432577|gb|AAP54192.1| putative
WD-repeat containing protein [Oryza sativa (japonica
cultivar-group)]
Length = 527
Score = 69.3 bits (168), Expect = 1e-11
Identities = 30/56 (53%), Positives = 43/56 (76%)
Frame = +1
Query: 196 MFCSISGTVPEQGVVSTKSGHLFEKSLIEKYVRETGKCPVTGEPLSTEDLLPLKVN 363
M C+ISG VP++ VVS KSG LFE+ L+E+Y+ + GKCPVT E L+ +D++ +K N
Sbjct: 1 MICAISGEVPDEPVVSKKSGLLFERRLVERYIEDHGKCPVTKEELTMDDIVAVKTN 56
