KCC003501A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003501A_C01 KCC003501A_c01
CTCAGCTCGAAGGTCCACACGTCGCGCGCCTCGGTGCCCAGGTCTGCCAAGTCCGCAGTT
CCCTTCACCGGAGTTCGTCGCGGCACATCCGTCCGTGGCTCTGCTTCAATGGCGCCTGTC
GCGGGCGTGACCGTCAAGCCGGTCCCCACCAAGCCCTATGAGGGCCAGAAGACCGGTACT
TCGGGTCTCCGGAAGAAGACGAAGGAGTTCATGCAGCCGAACTACCTCGCCAACTGGGTC
CAGTCGCTCTTCAACGCGCTGGGCGATGAGGTGAACGGCAAGAGCCTGGGCCTGGGCGGT
GACGGCCGCTACTACGGCAAGGAGGCGGCTCAGATCATTATCAAGCTGGCTGCCGGTAAC
GGCTTTAAGAAGGTGGTCGTGGGCCAGGACGCGCTGATGGCCACCCCCGCCGCCTCCGCC
CTCATCCGCCGCCGCCACCTGTACGGCGG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003501A_C01 KCC003501A_c01
         (449 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

sp|Q9SMM0|PGMP_BRANA Phosphoglucomutase, chloroplast precursor (...   145  1e-34
sp|Q9SM59|PGMP_PEA Phosphoglucomutase, chloroplast precursor (Gl...   141  2e-33
sp|Q9M4G5|PGMP_SOLTU Phosphoglucomutase, chloroplast precursor (...   140  3e-33
ref|NP_199995.1| phosphoglucomutase (emb|CAB64725.1) [Arabidopsi...   140  5e-33
pir||T52656 phosphoglucomutase (EC 5.4.2.2) precursor [validated...   140  5e-33

>sp|Q9SMM0|PGMP_BRANA Phosphoglucomutase, chloroplast precursor (Glucose phosphomutase)
           (PGM) gi|6272125|emb|CAB60109.1| plastidial
           phosphoglucomutase [Brassica napus]
          Length = 629

 Score =  145 bits (366), Expect = 1e-34
 Identities = 80/152 (52%), Positives = 106/152 (69%), Gaps = 4/152 (2%)
 Frame = +1

Query: 4   SSKVHTSRASVPRSAKSAVPFTGVRRGTSVRGSASMAPVAG---VTVKPVPTKPYEGQKT 174
           SS  H+S  S     + A P + +R  T    S+S   +AG   + +K +PTKP EGQKT
Sbjct: 30  SSSSHSSLLSSGIHLR-AKPNSRLRSVTGASSSSSGPIIAGSESIEIKSLPTKPIEGQKT 88

Query: 175 GTSGLRKKTKEFMQPNYLANWVQSLFNALG-DEVNGKSLGLGGDGRYYGKEAAQIIIKLA 351
           GTSGLRKK K FMQ NYLANW+Q+LFN+L  ++    +L LGGDGRY+ KEA+QIIIK+A
Sbjct: 89  GTSGLRKKVKVFMQDNYLANWIQALFNSLPLEDYKDATLVLGGDGRYFNKEASQIIIKIA 148

Query: 352 AGNGFKKVVVGQDALMATPAASALIRRRHLYG 447
           AGNG  K++VGQ+ +++TPA SA+IR+R   G
Sbjct: 149 AGNGVGKILVGQEGILSTPAVSAVIRKRKANG 180

>sp|Q9SM59|PGMP_PEA Phosphoglucomutase, chloroplast precursor (Glucose phosphomutase)
           (PGM) gi|6272283|emb|CAB60128.1| plastidial
           phosphoglucomutase [Pisum sativum]
          Length = 626

 Score =  141 bits (356), Expect = 2e-33
 Identities = 75/153 (49%), Positives = 102/153 (66%), Gaps = 8/153 (5%)
 Frame = +1

Query: 13  VHTSRASVPRSAKSAVPFTGVRRGTSVRGSASMAPVAGVTVKP-------VPTKPYEGQK 171
           +H S ++ P       PF  VR  +++R ++S +       +P       +PTKP EGQK
Sbjct: 26  IHHSSSNFPSFKVQNFPFR-VRYNSAIRATSSSSSTPTTIAEPNDIKINSIPTKPIEGQK 84

Query: 172 TGTSGLRKKTKEFMQPNYLANWVQSLFNAL-GDEVNGKSLGLGGDGRYYGKEAAQIIIKL 348
           TGTSGLRKK K F Q NYLANW+Q+LFN+L  ++     L LGGDGRY+ KEAAQIIIK+
Sbjct: 85  TGTSGLRKKVKVFKQENYLANWIQALFNSLPPEDYKNGLLVLGGDGRYFNKEAAQIIIKI 144

Query: 349 AAGNGFKKVVVGQDALMATPAASALIRRRHLYG 447
           AAGNG  K++VG++ +++TPA SA+IR+R   G
Sbjct: 145 AAGNGVGKILVGKEGILSTPAVSAVIRKREANG 177

>sp|Q9M4G5|PGMP_SOLTU Phosphoglucomutase, chloroplast precursor (Glucose phosphomutase)
           (PGM) gi|8250622|emb|CAB93680.1| plastidic
           phosphoglucomutase [Solanum tuberosum]
          Length = 632

 Score =  140 bits (354), Expect = 3e-33
 Identities = 75/134 (55%), Positives = 94/134 (69%), Gaps = 2/134 (1%)
 Frame = +1

Query: 52  SAVPFTGVRRGTSVRG-SASMAPVAGVTVKPVPTKPYEGQKTGTSGLRKKTKEFMQPNYL 228
           S VPF       S    S S+A    + +K VPTKP EGQKTGTSGLRKK K FMQ NYL
Sbjct: 50  SPVPFVVSASSVSPSSPSTSVAQSQDLKIKSVPTKPIEGQKTGTSGLRKKVKVFMQDNYL 109

Query: 229 ANWVQSLFNALG-DEVNGKSLGLGGDGRYYGKEAAQIIIKLAAGNGFKKVVVGQDALMAT 405
           ANW+Q+LFN+L  ++     L LGGDGRY+ +EAAQIIIK+AAGNG  K++VG+D +++T
Sbjct: 110 ANWIQALFNSLPLEDYKNGLLVLGGDGRYFNREAAQIIIKIAAGNGVGKILVGKDGILST 169

Query: 406 PAASALIRRRHLYG 447
            A SA+IR+R   G
Sbjct: 170 QAVSAVIRKREANG 183

>ref|NP_199995.1| phosphoglucomutase (emb|CAB64725.1) [Arabidopsis thaliana]
           gi|12585323|sp|Q9SCY0|PGMP_ARATH Phosphoglucomutase,
           chloroplast precursor (Glucose phosphomutase) (PGM)
           gi|10177881|dbj|BAB11251.1| phosphoglucomutase
           [Arabidopsis thaliana]
           gi|12004570|gb|AAG44095.1|AF216580_1 phosphoglucomutase
           precursor [Arabidopsis thaliana]
           gi|20466484|gb|AAM20559.1| phosphoglucomutase
           [Arabidopsis thaliana] gi|22136446|gb|AAM91301.1|
           phosphoglucomutase [Arabidopsis thaliana]
          Length = 623

 Score =  140 bits (352), Expect = 5e-33
 Identities = 69/123 (56%), Positives = 95/123 (77%), Gaps = 4/123 (3%)
 Frame = +1

Query: 91  VRGSASMAPVAG---VTVKPVPTKPYEGQKTGTSGLRKKTKEFMQPNYLANWVQSLFNAL 261
           +  S+S + VAG   + +K +PTKP EGQKTGTSGLRKK K FM+ NYLANW+Q+LFN+L
Sbjct: 52  IASSSSSSVVAGTDSIEIKSLPTKPIEGQKTGTSGLRKKVKVFMEDNYLANWIQALFNSL 111

Query: 262 G-DEVNGKSLGLGGDGRYYGKEAAQIIIKLAAGNGFKKVVVGQDALMATPAASALIRRRH 438
             ++    +L LGGDGRY+ KEA+QIIIK+AAGNG  +++VG++ +++TPA SA+IR+R 
Sbjct: 112 PLEDYKNATLVLGGDGRYFNKEASQIIIKIAAGNGVGQILVGKEGILSTPAVSAVIRKRK 171

Query: 439 LYG 447
             G
Sbjct: 172 ANG 174

>pir||T52656 phosphoglucomutase (EC 5.4.2.2) precursor [validated] - Arabidopsis
           thaliana gi|6686811|emb|CAB64725.1| phosphoglucomutase
           [Arabidopsis thaliana]
          Length = 623

 Score =  140 bits (352), Expect = 5e-33
 Identities = 69/123 (56%), Positives = 95/123 (77%), Gaps = 4/123 (3%)
 Frame = +1

Query: 91  VRGSASMAPVAG---VTVKPVPTKPYEGQKTGTSGLRKKTKEFMQPNYLANWVQSLFNAL 261
           +  S+S + VAG   + +K +PTKP EGQKTGTSGLRKK K FM+ NYLANW+Q+LFN+L
Sbjct: 52  IASSSSSSVVAGTDSIEIKSLPTKPIEGQKTGTSGLRKKVKVFMEDNYLANWIQALFNSL 111

Query: 262 G-DEVNGKSLGLGGDGRYYGKEAAQIIIKLAAGNGFKKVVVGQDALMATPAASALIRRRH 438
             ++    +L LGGDGRY+ KEA+QIIIK+AAGNG  +++VG++ +++TPA SA+IR+R 
Sbjct: 112 PLEDYKNATLVLGGDGRYFNKEASQIIIKIAAGNGVGQILVGKEGILSTPAVSAVIRKRK 171

Query: 439 LYG 447
             G
Sbjct: 172 ANG 174



EST assemble image


clone accession position
1 MXL072g06_r BP097267 1 376
2 MXL073g03_r BP097321 1 449




Chlamydomonas reinhardtii
Kazusa DNA Research Institute