KCC003498A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003498A_C01 KCC003498A_c01
caacctcatgcaccaccaagcacagctgcagcagcagcactcgcagcagcaccagcagca
gcaacagcagcaggcggctgCGGCTGCGGCCGCGCTCCTGCAGCAGTCGGGCGGCATGAT
GCTGGGTGACTCAATGAAGGGTGCTGGCGGCGCCTCCGACTGGAGCAACATTCTGCTCCA
GGCACAGCTGGCCGCCGGCTCCCTGGCTTAGCAAGCCCAGTTGACGTGAGGAGCGCAACC
CCCGAAATCTCGAAGGACAGAAGGCCTGTAGCGGGCGCAGTTTTGAGCACGATGTCGGGG
CAACGTTATGCGATACAACGAGCTTGCGTGGTAGGGTGCCGCGCATCATTGCGCGCGCCG
GAAGGCACGCGGCGTGATTGGAGACTTTGAGACATTGGAGAGGTCGAAGCAATGAGCTGG
GGAGGAGAGGAGGAGATGACCTGCAAAGCGCAGGTCAGCAGAGGCGAGCGATGAGAGAGG
AGATGGCAACTCTGGGACCAAAGAGGTGGACCGGGTTCTGTCAGCCG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003498A_C01 KCC003498A_c01
         (527 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAB05810.1| super cysteine rich protein; SCRP [Homo sapiens]        56  2e-07
gb|AAB91452.1| CTG26 alternate open reading frame [Homo sapiens]       48  9e-05
sp|Q24762|ZEST_DROVI REGULATORY PROTEIN ZESTE gi|158826|gb|AAA29...    46  3e-04
gb|AAF08725.1| zeste protein [Drosophila virilis] gi|6448933|gb|...    46  3e-04
gb|AAF08727.1| zeste protein [Drosophila virilis]                      46  3e-04

>gb|AAB05810.1| super cysteine rich protein; SCRP [Homo sapiens]
          Length = 46

 Score = 56.2 bits (134), Expect = 2e-07
 Identities = 17/32 (53%), Positives = 19/32 (59%)
 Frame = -3

Query: 99  RSAAAAAAACCCCCCWCCCECCCCSCAWWCMR 4
           RS       CCCCCC CCC CCCC C   C++
Sbjct: 8   RSRCCCCCCCCCCCCCCCCCCCCCCCFCCCLK 39

 Score = 56.2 bits (134), Expect = 2e-07
 Identities = 16/33 (48%), Positives = 19/33 (57%)
 Frame = -3

Query: 108 DCCRSAAAAAAACCCCCCWCCCECCCCSCAWWC 10
           + C   +     CCCCCC CCC CCCC C  +C
Sbjct: 3   ELCPDRSRCCCCCCCCCCCCCCCCCCCCCCCFC 35

 Score = 55.1 bits (131), Expect = 6e-07
 Identities = 17/30 (56%), Positives = 17/30 (56%)
 Frame = -3

Query: 111 PDCCRSAAAAAAACCCCCCWCCCECCCCSC 22
           PD  R        CCCCCC CCC CCCC C
Sbjct: 6   PDRSRCCCCCCCCCCCCCCCCCCCCCCCFC 35

 Score = 54.7 bits (130), Expect = 7e-07
 Identities = 16/32 (50%), Positives = 18/32 (56%)
 Frame = -3

Query: 105 CCRSAAAAAAACCCCCCWCCCECCCCSCAWWC 10
           C   +      CCCCCC CCC CCCC C + C
Sbjct: 5   CPDRSRCCCCCCCCCCCCCCCCCCCCCCCFCC 36

 Score = 53.5 bits (127), Expect = 2e-06
 Identities = 16/31 (51%), Positives = 17/31 (54%)
 Frame = -3

Query: 102 CRSAAAAAAACCCCCCWCCCECCCCSCAWWC 10
           C      +  CCCCCC CCC CCCC C   C
Sbjct: 2   CELCPDRSRCCCCCCCCCCCCCCCCCCCCCC 32

 Score = 49.7 bits (117), Expect = 2e-05
 Identities = 14/25 (56%), Positives = 14/25 (56%)
 Frame = -3

Query: 105 CCRSAAAAAAACCCCCCWCCCECCC 31
           CC         CCCCCC CCC CCC
Sbjct: 13  CCCCCCCCCCCCCCCCCCCCCFCCC 37

 Score = 48.5 bits (114), Expect = 5e-05
 Identities = 14/26 (53%), Positives = 14/26 (53%)
 Frame = -3

Query: 105 CCRSAAAAAAACCCCCCWCCCECCCC 28
           CC         CCCCCC CCC  CCC
Sbjct: 12  CCCCCCCCCCCCCCCCCCCCCCFCCC 37

 Score = 48.1 bits (113), Expect = 7e-05
 Identities = 14/27 (51%), Positives = 14/27 (51%)
 Frame = -3

Query: 102 CRSAAAAAAACCCCCCWCCCECCCCSC 22
           C         CCCCCC CCC CC C C
Sbjct: 11  CCCCCCCCCCCCCCCCCCCCCCCFCCC 37

>gb|AAB91452.1| CTG26 alternate open reading frame [Homo sapiens]
          Length = 124

 Score = 47.8 bits (112), Expect = 9e-05
 Identities = 14/19 (73%), Positives = 14/19 (73%)
 Frame = -3

Query: 72  CCCCCCWCCCECCCCSCAW 16
           CCCCCC CC  CCCC C W
Sbjct: 102 CCCCCCCCC--CCCCCCCW 118

 Score = 43.9 bits (102), Expect = 0.001
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = -3

Query: 63  CCCWCCCECCCCSCAWWCM 7
           CCC CCC CCCC C  W +
Sbjct: 102 CCCCCCCCCCCCCCCCWLL 120

 Score = 36.6 bits (83), Expect = 0.20
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = -3

Query: 99  RSAAAAAAACCCCCCWCCC 43
           R        CCCCCC CCC
Sbjct: 98  RGMGCCCCCCCCCCCCCCC 116

 Score = 31.6 bits (70), Expect = 6.6
 Identities = 8/17 (47%), Positives = 8/17 (47%)
 Frame = -3

Query: 102 CRSAAAAAAACCCCCCW 52
           C         CCCCCCW
Sbjct: 102 CCCCCCCCCCCCCCCCW 118

>sp|Q24762|ZEST_DROVI REGULATORY PROTEIN ZESTE gi|158826|gb|AAA29052.1| zeste
          Length = 618

 Score = 45.8 bits (107), Expect = 3e-04
 Identities = 23/34 (67%), Positives = 25/34 (72%)
 Frame = +2

Query: 14  HQAQLQQQHSQQHQQQQQQQAAAAAAALLQQSGG 115
           HQ Q QQQ  QQ QQQQQQ AAAAAA  +Q +GG
Sbjct: 435 HQQQQQQQQVQQQQQQQQQAAAAAAAVKMQLTGG 468

 Score = 35.0 bits (79), Expect = 0.59
 Identities = 18/27 (66%), Positives = 19/27 (69%)
 Frame = +2

Query: 26  LQQQHSQQHQQQQQQQAAAAAAALLQQ 106
           L+ Q  QQ QQQQQQQAAA A A  QQ
Sbjct: 232 LEAQQQQQQQQQQQQQAAAQAQAEAQQ 258

 Score = 33.9 bits (76), Expect = 1.3
 Identities = 16/21 (76%), Positives = 16/21 (76%)
 Frame = +2

Query: 17  QAQLQQQHSQQHQQQQQQQAA 79
           Q QLQQQ  QQ QQQQQQQ A
Sbjct: 523 QLQLQQQQQQQQQQQQQQQQA 543

 Score = 31.2 bits (69), Expect = 8.6
 Identities = 17/39 (43%), Positives = 20/39 (50%)
 Frame = +2

Query: 23  QLQQQHSQQHQQQQQQQAAAAAAALLQQSGGMMLGDSMK 139
           + QQQ  QQ QQQQQ  A A A A  QQ     + +  K
Sbjct: 233 EAQQQQQQQQQQQQQAAAQAQAEAQQQQQQQSAVAEMQK 271

>gb|AAF08725.1| zeste protein [Drosophila virilis] gi|6448933|gb|AAF08726.1| zeste
           protein [Drosophila virilis] gi|6448936|gb|AAF08729.1|
           zeste protein [Drosophila virilis]
           gi|6448938|gb|AAF08731.1| zeste protein [Drosophila
           virilis] gi|6448940|gb|AAF08733.1| zeste protein
           [Drosophila virilis] gi|6448941|gb|AAF08734.1| zeste
           protein [Drosophila virilis] gi|6448942|gb|AAF08735.1|
           zeste protein [Drosophila virilis]
           gi|6448945|gb|AAF08738.1| zeste protein [Drosophila
           virilis] gi|6448946|gb|AAF08739.1| zeste protein
           [Drosophila virilis] gi|6448947|gb|AAF08740.1| zeste
           protein [Drosophila virilis] gi|6448948|gb|AAF08741.1|
           zeste protein [Drosophila virilis]
           gi|6448950|gb|AAF08743.1| zeste protein [Drosophila
           virilis] gi|6448951|gb|AAF08744.1| zeste protein
           [Drosophila virilis]
          Length = 154

 Score = 45.8 bits (107), Expect = 3e-04
 Identities = 23/34 (67%), Positives = 25/34 (72%)
 Frame = +2

Query: 14  HQAQLQQQHSQQHQQQQQQQAAAAAAALLQQSGG 115
           HQ Q QQQ  QQ QQQQQQ AAAAAA  +Q +GG
Sbjct: 111 HQQQQQQQQVQQQQQQQQQAAAAAAAVKMQLTGG 144

 Score = 32.0 bits (71), Expect = 5.0
 Identities = 19/30 (63%), Positives = 19/30 (63%)
 Frame = +2

Query: 17  QAQLQQQHSQQHQQQQQQQAAAAAAALLQQ 106
           QAQ QQ   QQ   QQQQ A AAAAA  QQ
Sbjct: 59  QAQAQQLAQQQLAAQQQQLAVAAAAAHQQQ 88

>gb|AAF08727.1| zeste protein [Drosophila virilis]
          Length = 153

 Score = 45.8 bits (107), Expect = 3e-04
 Identities = 23/35 (65%), Positives = 25/35 (70%)
 Frame = +2

Query: 11  HHQAQLQQQHSQQHQQQQQQQAAAAAAALLQQSGG 115
           H Q Q QQQ  QQ QQQQQQ AAAAAA  +Q +GG
Sbjct: 109 HQQQQQQQQQVQQQQQQQQQAAAAAAAVKMQLTGG 143

 Score = 32.0 bits (71), Expect = 5.0
 Identities = 19/30 (63%), Positives = 19/30 (63%)
 Frame = +2

Query: 17  QAQLQQQHSQQHQQQQQQQAAAAAAALLQQ 106
           QAQ QQ   QQ   QQQQ A AAAAA  QQ
Sbjct: 57  QAQAQQLAQQQLAAQQQQLAVAAAAAHQQQ 86

 Score = 32.0 bits (71), Expect = 5.0
 Identities = 26/76 (34%), Positives = 30/76 (39%)
 Frame = +2

Query: 5   LMHHQAQLQQQHSQQHQQQQQQQAAAAAAALLQQSGGMMLGDSMKGAGGASDWSNILLQA 184
           L   Q QL    +  HQQQQQQQAAAA      Q          +             Q 
Sbjct: 68  LAAQQQQLAVAAAAAHQQQQQQQAAAAVVVQQHQQQQQQQQHQQQQQQQQQVQQQQQQQQ 127

Query: 185 QLAAGSLA*QAQLT*G 232
           Q AA + A + QLT G
Sbjct: 128 QAAAAAAAVKMQLTGG 143



EST assemble image


clone accession position
1 MXL064h11_r BP096791 1 377
2 MXL090h11_r BP098291 205 527




Chlamydomonas reinhardtii
Kazusa DNA Research Institute