KCC003496A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003496A_C01 KCC003496A_c01
CAGCGCAGGAGCGCCAGCGGCCACGGCGACGGCTCCGCAGCAGCCATCAGCACACCGGCA
CTAGGCGACGGCACCGACGGCACCAACACGCCAGTCGCCGGCACGGCCACTGCGGCCACC
GTCACCGCCGCCGACACCGCCACGGTGACCACCAACAGCGCGCTGCTGCGCGGCGCAGGC
GGCAGCGCCTCGTCCCTGGACTCACTGGCGCACTGCCTTCCGAAGAATTTCAACCTCAAC
CTTGCCATGGCCCTGCAGCGCGCCGGCGGCGGCAGCAGCGGCGCTCAGCCGCCCGCATCG
CAGCAGCACCACCACAACCAGCAGCCTCCCGGCACACCCACCTCGCTGGCAACATCCATG
GCGGCGGGCGTGGCCGGTTGCATCGGCGGCGGCAGCGGCAGGGCCACGCCGCAGCGGGTC
CAGCTGGACCCGGAGGTGCTCAAGGCCACGCGCAAGGC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003496A_C01 KCC003496A_c01
         (458 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

emb|CAD19511.1| UL36 protein [Pseudorabies virus]                      55  4e-07
gb|AAA21754.1| homologous to Saccharopolyspora erythraea beta-ke...    55  5e-07
gb|AAB58410.1| merozoite surface protein-1 [Plasmodium berghei]        53  1e-06
gb|AAF78235.1| 163R* [porcine adenovirus 3]                            53  1e-06
pir||T44768 antifreeze glycopeptide AFGP polyprotein precursor [...    53  1e-06

>emb|CAD19511.1| UL36 protein [Pseudorabies virus]
          Length = 3084

 Score = 55.1 bits (131), Expect = 4e-07
 Identities = 49/130 (37%), Positives = 54/130 (40%), Gaps = 2/130 (1%)
 Frame = +2

Query: 5    AGAPAATATAPQQPSAHRH*ATAPTAPTRQSPARPLRPPSPPPTPPR*PPTARCCAAQAA 184
            A APA     P+ P A    A  PT P  Q P  P +PPS    P + PP     AA   
Sbjct: 2271 ATAPAPETAPPEAPQAQPPAAAKPT-PQPQGPPPPPQPPSAQAPPAQKPPAQPATAAATT 2329

Query: 185  APR--PWTHWRTAFRRISTSTLPWPCSAPAAAAAALSRPHRSSTTTTSSLPAHPPRWQHP 358
            AP+  P T   T   R  T T P P SA  AAA    +P        SS PA  PR   P
Sbjct: 2330 APKATPQTQPPT---RAQTQTAPPPPSAATAAAQVPPQP-------PSSQPAAKPRGAPP 2379

Query: 359  WRRAWPVASA 388
               A P  SA
Sbjct: 2380 APPAPPPPSA 2389

 Score = 49.7 bits (117), Expect = 2e-05
 Identities = 46/146 (31%), Positives = 56/146 (37%), Gaps = 9/146 (6%)
 Frame = +2

Query: 8    GAPAATATAPQQPSAHRH*ATAPTAPTRQS------PARPLRPPSPPPTPPR*PPTARCC 169
            G P   A  P+ P+ H      P  P +        PA P  P      PPR P  A   
Sbjct: 2688 GGPVRRAAGPRPPAGHLRLHIPPPQPVQLEGVVVPLPASPETPAPAQTQPPRSPLAA--- 2744

Query: 170  AAQAAAPRPWTHWRTAFRRISTSTLPWPCSAPAAAAAALSRPHRSSTTTTSSLPAHPPRW 349
                AAP               S +  P ++ AAAAAA +    SS+ TTSS PA PP  
Sbjct: 2745 PTSLAAP---------------SEIERPAASAAAAAAATTTTTSSSSATTSSAPAAPPPA 2789

Query: 350  QHPWRRAWPVAS---AAAAAGPRRSG 418
              P R A P  +   +  A  P R G
Sbjct: 2790 PPPSRPAAPPPAPPPSRPAPTPERHG 2815

 Score = 48.1 bits (113), Expect = 5e-05
 Identities = 37/115 (32%), Positives = 49/115 (42%), Gaps = 2/115 (1%)
 Frame = +2

Query: 14   PAATATAPQQPSAHRH*ATAPTAPTRQSP--ARPLRPPSPPPTPPR*PPTARCCAAQAAA 187
            P   ATAP   +A       P AP  Q P  A+P   P  PP PP+ PP+A+   AQ   
Sbjct: 2267 PPYPATAPAPETA------PPEAPQAQPPAAAKPTPQPQGPPPPPQ-PPSAQAPPAQKPP 2319

Query: 188  PRPWTHWRTAFRRISTSTLPWPCSAPAAAAAALSRPHRSSTTTTSSLPAHPPRWQ 352
             +P T   T   + +  T P     P  A    + P  S+ T  + +P  PP  Q
Sbjct: 2320 AQPATAAATTAPKATPQTQP-----PTRAQTQTAPPPPSAATAAAQVPPQPPSSQ 2369

 Score = 45.4 bits (106), Expect = 3e-04
 Identities = 36/94 (38%), Positives = 43/94 (45%), Gaps = 1/94 (1%)
 Frame = +2

Query: 17   AATATAPQQPSAHRH*ATAPTAPTRQSP-ARPLRPPSPPPTPPR*PPTARCCAAQAAAPR 193
            A T TAP  PSA    A  P  P    P A+P   P  PP PP  PP+A+    + AAP 
Sbjct: 2343 AQTQTAPPPPSAATAAAQVPPQPPSSQPAAKPRGAPPAPPAPP--PPSAQTTLPRPAAP- 2399

Query: 194  PWTHWRTAFRRISTSTLPWPCSAPAAAAAALSRP 295
            P     +A      +TLP P   P +A AA   P
Sbjct: 2400 PAPPPPSA-----QTTLPRPAPPPPSAPAATPTP 2428

 Score = 38.9 bits (89), Expect = 0.028
 Identities = 39/124 (31%), Positives = 51/124 (40%), Gaps = 14/124 (11%)
 Frame = +2

Query: 74   PTAPTRQSPARPLRPPSPPPTPPR*PPTARCCAAQAAAPRPWTHWRTAFRRI-------- 229
            P+ P  Q P R   PP PPP PP+        A++  A  P T  R+   R+        
Sbjct: 2860 PSDPPVQFPGRE-EPPLPPPPPPQ-----PLWASEGEAETPATPLRSPLERMPWPPPLEA 2913

Query: 230  --STSTLPWPCSAPAAAAAALSRPHRS----STTTTSSLPAHPPRWQHPWRRAWPVASAA 391
              +T  LP P  AP A  + L+ PH+        T    PAHPP  +   +R  P AS  
Sbjct: 2914 PGTTPELP-PEFAPPAPRSPLADPHQPPAWFDDLTALVPPAHPPP-RRQQQRPPPPASPL 2971

Query: 392  AAAG 403
               G
Sbjct: 2972 GGLG 2975

 Score = 37.4 bits (85), Expect = 0.080
 Identities = 52/167 (31%), Positives = 61/167 (36%), Gaps = 32/167 (19%)
 Frame = +2

Query: 26   ATAPQQP-SAHRH*ATAPTAPTRQSPARPL-----RPPSP----PPTPPR*PPTARCCAA 175
            A  P++P SA R   T    P  Q   RP      RPP      P T P  PP A   AA
Sbjct: 2619 ALVPRRPVSAPRQ--TGGLPPAAQPEGRPPGGLEPRPPQAQAQAPATAPTGPPAAAAAAA 2676

Query: 176  QAAAPRPWTHWRTAFRR----------------------ISTSTLPWPCSAPAAAAAALS 289
             AA P P        RR                      +    +P P S P   A A +
Sbjct: 2677 TAAVPAPGVGPGGPVRRAAGPRPPAGHLRLHIPPPQPVQLEGVVVPLPAS-PETPAPAQT 2735

Query: 290  RPHRSSTTTTSSLPAHPPRWQHPWRRAWPVASAAAAAGPRRSGSSWT 430
            +P RS     +SL A P   + P   A   A+AAAA     S SS T
Sbjct: 2736 QPPRSPLAAPTSLAA-PSEIERP---AASAAAAAAATTTTTSSSSAT 2778

 Score = 36.6 bits (83), Expect = 0.14
 Identities = 46/177 (25%), Positives = 58/177 (31%), Gaps = 45/177 (25%)
 Frame = +2

Query: 14   PAATATAPQQPSAHRH*ATAPTAPTRQSPARPLRPPSPPPT--------------PPR*P 151
            P A A  P  P         P  P   +PA  L PP+PPP               P + P
Sbjct: 2165 PLAPAAPPAPP---------PAKPAELTPAAKLAPPAPPPAKPVETTPLTKPQPQPQQGP 2215

Query: 152  PTA--------RCCAAQAAAPR-PWTHWRTAFRRISTS------------TLPWPCSAPA 268
            P A        +  AA    PR P     ++ R+I  S              P+P +APA
Sbjct: 2216 PAAHKKPAAGTKAAAAPKQQPREPAPKPHSSPRKIQPSLKARIEPPPPVINPPYPATAPA 2275

Query: 269  AAAAALSRPHRSSTTTTSSLP---AHPPRWQHPWRRAWPV-------ASAAAAAGPR 409
               A    P           P     PP  Q P  +A P        A+AAA   P+
Sbjct: 2276 PETAPPEAPQAQPPAAAKPTPQPQGPPPPPQPPSAQAPPAQKPPAQPATAAATTAPK 2332

 Score = 36.6 bits (83), Expect = 0.14
 Identities = 38/129 (29%), Positives = 47/129 (35%), Gaps = 3/129 (2%)
 Frame = +2

Query: 2    SAGAPAATATAPQQPSAHRH*ATAPTAPTRQSPARPLRPPSPPPTPPR*PPTARCCAAQA 181
            +A A AAT T     SA    ++AP AP    P  P RP +PPP PP   P         
Sbjct: 2761 AAAAAAATTTTTSSSSATT--SSAPAAPPPAPP--PSRPAAPPPAPPPSRP--------- 2807

Query: 182  AAPRPWTHWRTAFRRISTSTLPWPCSAPAAAAAALSRPHRSSTTTTSSL---PAHPPRWQ 352
             AP P  H        +   LP   S      A  + P    +    +L   P   P  Q
Sbjct: 2808 -APTPERHGEPPRLMFTPPPLPPQPSQQRPPEAPWTWPEPRDSAGPPALFTPPPSDPPVQ 2866

Query: 353  HPWRRAWPV 379
             P R   P+
Sbjct: 2867 FPGREEPPL 2875

 Score = 32.7 bits (73), Expect = 2.0
 Identities = 27/96 (28%), Positives = 38/96 (39%), Gaps = 1/96 (1%)
 Frame = +2

Query: 74   PTAPTRQSPARPLRPPSPPPTPPR*PPTARCCAAQAAAPRPWTHWRTAFRRISTSTLPWP 253
            P +P    P  P   P+ PP PP   P     AA+ A P P        + + T+ L  P
Sbjct: 2153 PPSPPVDPPTLPPLAPAAPPAPPPAKPAELTPAAKLAPPAP-----PPAKPVETTPLTKP 2207

Query: 254  CSAP-AAAAAALSRPHRSSTTTTSSLPAHPPRWQHP 358
               P     AA  +P  ++ T  ++ P   PR   P
Sbjct: 2208 QPQPQQGPPAAHKKP--AAGTKAAAAPKQQPREPAP 2241

 Score = 30.8 bits (68), Expect = 7.5
 Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
 Frame = -1

Query: 188 ALPPAPRSSALLVVTVAVSAAVTVAAVAVPAT---GVLVPSVPSPSAGVLMAAAEPSPWP 18
           A PP     A+ V+ VA   AV V+A A PA    G  +P  P       M      PWP
Sbjct: 240 AAPPTRGPGAIPVLAVAPVPAVPVSAAAAPAPAPGGAPLPPPPRVQKRPSMPKRRRPPWP 299

>gb|AAA21754.1| homologous to Saccharopolyspora erythraea beta-ketoacyl synthase
          Length = 527

 Score = 54.7 bits (130), Expect = 5e-07
 Identities = 41/119 (34%), Positives = 49/119 (40%), Gaps = 6/119 (5%)
 Frame = +3

Query: 120 RHRRRHRH----GDHQQRAAARRRRQRLVPGLTGALPSEEFQPQPCHGPAARRRRQQRRS 287
           RH+R H H    GD   RAA R  R R                +PC GP+ R  R  R  
Sbjct: 114 RHQRAHHHRAGPGDRGGRAALRPPRLR----------------RPCPGPSPRSPRSARPQ 157

Query: 288 AARIAAAPPQPAASRHTHLAGNIHGGGRGRL--HRRRQRQGHAAAGPAGPGGAQGHAQG 458
            ARIA +P  P ++  T     +    RG    HRRR R G   AGP     A+G   G
Sbjct: 158 LARIATSPAPPRSTSATPCTARLLRAPRGPAGGHRRRGRAGGGGAGPCRGAQARGALPG 216

>gb|AAB58410.1| merozoite surface protein-1 [Plasmodium berghei]
          Length = 153

 Score = 53.1 bits (126), Expect = 1e-06
 Identities = 51/142 (35%), Positives = 60/142 (41%), Gaps = 18/142 (12%)
 Frame = +2

Query: 65  ATAPTAPTRQSPARPLRPPSPP--PTPPR*PPTARCCAAQAAAPRPWT-HWRTAFRRIST 235
           A+ PT PT  +P  P  PP+PP  PTPP  P T       A + +  T    TA      
Sbjct: 13  ASPPTPPTPPTPPTPPTPPTPPTLPTPPTLPTTPTPVTPAAPSEQTTTPEAATAASNPGA 72

Query: 236 STLPWPCSAPAAAA-------AALSRP--HRSSTTTTSSLPAHP------PRWQHPWRRA 370
           S    P S P A+A       AA S P    SST +T+S P+ P      P    P   A
Sbjct: 73  SASETPASNPGASASSTPSTPAAASNPGASASSTPSTASNPSAPASSTVQPTQVQP---A 129

Query: 371 WPVASAAAAAGPRRSGSSWTRR 436
            P A AA  A P  S  S T R
Sbjct: 130 APAAPAAVPAQPANSNGSITTR 151

 Score = 36.2 bits (82), Expect = 0.18
 Identities = 36/122 (29%), Positives = 48/122 (38%), Gaps = 6/122 (4%)
 Frame = +2

Query: 107 PLRPPSPPPTPPR*PPTARCCAAQAAAPRPWTHWRTAFRRISTSTLPWPCSAPA------ 268
           P+  P  PPTPP  PPT          P P T        + T+  P   +AP+      
Sbjct: 11  PVASPPTPPTPPT-PPTPPTPPTPPTLPTPPT--------LPTTPTPVTPAAPSEQTTTP 61

Query: 269 AAAAALSRPHRSSTTTTSSLPAHPPRWQHPWRRAWPVASAAAAAGPRRSGSSWTRRCSRP 448
            AA A S P  S++ T +S P            +   ++ AAA+ P  S SS     S P
Sbjct: 62  EAATAASNPGASASETPASNPGA--------SASSTPSTPAAASNPGASASSTPSTASNP 113

Query: 449 RA 454
            A
Sbjct: 114 SA 115

>gb|AAF78235.1| 163R* [porcine adenovirus 3]
          Length = 163

 Score = 53.1 bits (126), Expect = 1e-06
 Identities = 49/152 (32%), Positives = 56/152 (36%), Gaps = 2/152 (1%)
 Frame = +2

Query: 2   SAGAPAATATAP--QQPSAHRH*ATAPTAPTRQSPARPLRPPSPPPTPPR*PPTARCCAA 175
           +AG P   A  P  Q  S   H    P    ++    P  P SPPP PPR P        
Sbjct: 13  AAGLPLQQAQGPPPQSSSGPSHPPPLPWCSLQRRAPPPRPPQSPPPLPPRPP-------- 64

Query: 176 QAAAPRPWTHWRTAFRRISTSTLPWPCSAPAAAAAALSRPHRSSTTTTSSLPAHPPRWQH 355
               PRPW            +  P P +APAAAAAA   P  S     S  P   P    
Sbjct: 65  ----PRPW----------PAAVSPPPPAAPAAAAAAPPAPAASCPPPRSDPPMETP---- 106

Query: 356 PWRRAWPVASAAAAAGPRRSGSSWTRRCSRPR 451
           P  +     S AAA    RSGS    R  + R
Sbjct: 107 PGTQTPSPPSPAAAVAAERSGSRPAPRSGQGR 138

>pir||T44768 antifreeze glycopeptide AFGP polyprotein precursor [imported] -
           Boreogadus saida gi|2078483|gb|AAC60129.1| antifreeze
           glycopeptide AFGP polyprotein precursor
          Length = 507

 Score = 53.1 bits (126), Expect = 1e-06
 Identities = 46/144 (31%), Positives = 60/144 (40%), Gaps = 1/144 (0%)
 Frame = +2

Query: 2   SAGAPAATATAPQQPSAHRH*ATAPTAPTRQSPARPLRPPSPPPTP-PR*PPTARCCAAQ 178
           +  A  ATA  P  P+     AT  TA T  +PAR   P +P     P  P TA   A  
Sbjct: 264 ATAATLATAATPATPATPATAATDATAATAATPARAATPATPATAATPATPATAATAATA 323

Query: 179 AAAPRPWTHWRTAFRRISTSTLPWPCSAPAAAAAALSRPHRSSTTTTSSLPAHPPRWQHP 358
           A A    T  R A R  + +T   P +A  AA AA +    ++ T   +  A  P     
Sbjct: 324 ATAATAATPARAA-RAATPATAATPATAATAATAATAATAATAATPARAARAATPATAAT 382

Query: 359 WRRAWPVASAAAAAGPRRSGSSWT 430
              A   A+AA AA P R+  + T
Sbjct: 383 AATAATAATAATAATPARAARAAT 406

 Score = 50.4 bits (119), Expect = 9e-06
 Identities = 46/138 (33%), Positives = 58/138 (41%), Gaps = 6/138 (4%)
 Frame = +2

Query: 2   SAGAPAATATAPQQPSAHRH*ATAPTAPTRQSPARPLRPPSPPPTPPR*PPTARCCAAQA 181
           +A  PA  AT     +A    ATA TA T  +PAR  R  +P       P TA   A  A
Sbjct: 63  TAATPATAATPATAATAATTAATAATAATAATPARAARAATPATAAT--PATAATAATAA 120

Query: 182 AAPRPWTHWR--TAFRRISTSTLPWPCSAPAAAAAALS----RPHRSSTTTTSSLPAHPP 343
            A    T  R  T     + +T   P +A  AA AA S       R++T  T++ PA P 
Sbjct: 121 TAATAETPARAATPATAATPATAATPATAATAATAATSATAATAARAATPATAATPATPA 180

Query: 344 RWQHPWRRAWPVASAAAA 397
                 R A P  +A AA
Sbjct: 181 TAARAARAATPATAATAA 198

 Score = 49.7 bits (117), Expect = 2e-05
 Identities = 48/141 (34%), Positives = 59/141 (41%), Gaps = 11/141 (7%)
 Frame = +2

Query: 11  APAATATAPQQPSAHRH*ATAPTAPTRQSPARPLR--PPSPPPTP--PR*PPTARCCAAQ 178
           A AA A  P   +     ATA TA T  +PAR  R   P+ P TP  P  P TA   A  
Sbjct: 369 ARAARAATPATAATAATAATAATAATAATPARAARAATPATPATPATPATPATAATAATA 428

Query: 179 AAAPRPWTHWRTAFRRISTSTLPWPCSA-----PAAAAAALSRP--HRSSTTTTSSLPAH 337
           A A        TA    + +T P P  A     PA  A   + P    ++T  T++  A 
Sbjct: 429 ATAATA----ATAATAATAATAPTPARAARAATPATGATPATAPTAGTAATAATAATAAT 484

Query: 338 PPRWQHPWRRAWPVASAAAAA 400
           P R   P   A PV +A  AA
Sbjct: 485 PARASTPATAATPVTAATPAA 505

 Score = 45.4 bits (106), Expect = 3e-04
 Identities = 39/132 (29%), Positives = 50/132 (37%)
 Frame = +2

Query: 11  APAATATAPQQPSAHRH*ATAPTAPTRQSPARPLRPPSPPPTPPR*PPTARCCAAQAAAP 190
           A  ATA  P   +     ATA TA T  +PAR  R  +P              AA AA P
Sbjct: 339 ATPATAATPATAATAATAATAATAATAATPARAARAATPATAATAATAATAATAATAATP 398

Query: 191 RPWTHWRTAFRRISTSTLPWPCSAPAAAAAALSRPHRSSTTTTSSLPAHPPRWQHPWRRA 370
                  T     + +T   P +A  AA AA +    ++T  T++  A  P      R A
Sbjct: 399 ARAARAATPATPATPATPATPATAATAATAATAA--TAATAATAATAATAPTPARAARAA 456

Query: 371 WPVASAAAAAGP 406
            P   A  A  P
Sbjct: 457 TPATGATPATAP 468

 Score = 44.7 bits (104), Expect = 5e-04
 Identities = 42/146 (28%), Positives = 57/146 (38%)
 Frame = +2

Query: 11  APAATATAPQQPSAHRH*ATAPTAPTRQSPARPLRPPSPPPTPPR*PPTARCCAAQAAAP 190
           A  ATA  P   +     ATA TA T  + A   R  +P        P     AA+AA P
Sbjct: 132 ATPATAATPATAATPATAATAATAATSATAATAARAATPATAATPATPATAARAARAATP 191

Query: 191 RPWTHWRTAFRRISTSTLPWPCSAPAAAAAALSRPHRSSTTTTSSLPAHPPRWQHPWRRA 370
                  TA    + +T     +A AA AA  +R  R++T  T+  PA           A
Sbjct: 192 ATAATAATAATAATAAT-----AATAATAATPARAARAATPATAPTPA---------TAA 237

Query: 371 WPVASAAAAAGPRRSGSSWTRRCSRP 448
            P  +A AA  P  +  +   R + P
Sbjct: 238 TPATAATAATAPTAATPARAARAATP 263

 Score = 44.3 bits (103), Expect = 7e-04
 Identities = 42/151 (27%), Positives = 58/151 (37%), Gaps = 2/151 (1%)
 Frame = +2

Query: 2   SAGAPAATATAPQQPSAHRH*ATAPTAPTRQSPARPLRP--PSPPPTPPR*PPTARCCAA 175
           +A A AAT      P+     ATA TA T  + A    P   + P T      TA   A 
Sbjct: 29  AAAARAATPATAATPATAATPATAATAATEATAATAATPATAATPATAATAATTAATAAT 88

Query: 176 QAAAPRPWTHWRTAFRRISTSTLPWPCSAPAAAAAALSRPHRSSTTTTSSLPAHPPRWQH 355
            A A  P    R A    + +      +A AA AA    P R++T  T++ PA       
Sbjct: 89  AATAATPARAARAATPATAATPATAATAATAATAATAETPARAATPATAATPA------- 141

Query: 356 PWRRAWPVASAAAAAGPRRSGSSWTRRCSRP 448
               A P  +A AA     + ++   R + P
Sbjct: 142 --TAATPATAATAATAATSATAATAARAATP 170

 Score = 43.1 bits (100), Expect = 0.001
 Identities = 43/133 (32%), Positives = 53/133 (39%), Gaps = 1/133 (0%)
 Frame = +2

Query: 2   SAGAPAATATAPQQPSAHRH*ATAPTAPTRQSPARPLRPPSP-PPTPPR*PPTARCCAAQ 178
           +A  PA  ATA    +A    ATA TA T   PAR  R  +P     P    TA   A  
Sbjct: 307 TAATPATPATAATAATA----ATAATAAT---PARAARAATPATAATPATAATAATAATA 359

Query: 179 AAAPRPWTHWRTAFRRISTSTLPWPCSAPAAAAAALSRPHRSSTTTTSSLPAHPPRWQHP 358
           A A    T  R A      +      +A AA AA  + P R++   T + PA P     P
Sbjct: 360 ATAATAATPARAARAATPATAATAATAATAATAATAATPARAARAATPATPATPATPATP 419

Query: 359 WRRAWPVASAAAA 397
              A    +A AA
Sbjct: 420 ATAATAATAATAA 432

 Score = 43.1 bits (100), Expect = 0.001
 Identities = 44/142 (30%), Positives = 60/142 (41%), Gaps = 2/142 (1%)
 Frame = +2

Query: 11  APAATATAPQQPSAHRH*ATAPTAPTRQSPARPLRP-PSPPPTPPR*PPTARCCAAQAAA 187
           A AAT      P+     ATA TA T ++PAR   P  +  P     P TA   A  A +
Sbjct: 99  ARAATPATAATPATAATAATAATAATAETPARAATPATAATPATAATPATAATAATAATS 158

Query: 188 PRPWTHWRTAFRRISTSTLPWPCS-APAAAAAALSRPHRSSTTTTSSLPAHPPRWQHPWR 364
                   TA R  + +T   P + A AA AA  + P  ++T  T++  A          
Sbjct: 159 ATA----ATAARAATPATAATPATPATAARAARAATPATAATAATAATAA---------- 204

Query: 365 RAWPVASAAAAAGPRRSGSSWT 430
            A   A+AA AA P R+  + T
Sbjct: 205 TAATAATAATAATPARAARAAT 226

 Score = 42.7 bits (99), Expect = 0.002
 Identities = 44/144 (30%), Positives = 59/144 (40%), Gaps = 1/144 (0%)
 Frame = +2

Query: 2   SAGAPAATATAPQQPSAHRH*ATAPTAPTRQSPARPLRPPSPPPTPPR*PPTARCCAAQA 181
           +  A AATA     P+     AT  TAPT  + A P    +    P    P     AA+A
Sbjct: 204 ATAATAATAATAATPARAARAATPATAPTPATAATPATAATAATAPTAATPAR---AARA 260

Query: 182 AAPRPWTHWRTAFRRISTSTLPWPCS-APAAAAAALSRPHRSSTTTTSSLPAHPPRWQHP 358
           A P       TA    + +T     + A AA AA  +R    +T  T++ PA P      
Sbjct: 261 ATPATAATLATAATPATPATPATAATDATAATAATPARAATPATPATAATPATPA----T 316

Query: 359 WRRAWPVASAAAAAGPRRSGSSWT 430
              A   A+AA AA P R+  + T
Sbjct: 317 AATAATAATAATAATPARAARAAT 340

 Score = 37.7 bits (86), Expect = 0.062
 Identities = 41/143 (28%), Positives = 55/143 (37%)
 Frame = +2

Query: 2   SAGAPAATATAPQQPSAHRH*ATAPTAPTRQSPARPLRPPSPPPTPPR*PPTARCCAAQA 181
           +  A AATA     P      ATA T  T  + AR  R  +P              AA A
Sbjct: 156 ATSATAATAARAATP------ATAATPATPATAARAARAATPATAATAATAATAATAATA 209

Query: 182 AAPRPWTHWRTAFRRISTSTLPWPCSAPAAAAAALSRPHRSSTTTTSSLPAHPPRWQHPW 361
           A          A R  + +T P P +A   A AA      ++T  T++ PA   R   P 
Sbjct: 210 ATAATAATPARAARAATPATAPTPATAATPATAA-----TAATAPTAATPARAARAATP- 263

Query: 362 RRAWPVASAAAAAGPRRSGSSWT 430
             A  +A+AA  A P    ++ T
Sbjct: 264 ATAATLATAATPATPATPATAAT 286

 Score = 34.7 bits (78), Expect = 0.52
 Identities = 41/139 (29%), Positives = 52/139 (36%), Gaps = 10/139 (7%)
 Frame = +2

Query: 11  APAATATAPQQPSAHRH*ATAPTAPTRQSPARPLRP-----PSPPPTPPR*P----PTAR 163
           A AAT      P+     ATA T+ T  + AR   P     P+ P T  R      P   
Sbjct: 135 ATAATPATAATPATAATAATAATSATAATAARAATPATAATPATPATAARAARAATPATA 194

Query: 164 CCAAQAAAPRPWTHWRTAFRRISTSTLPWPC-SAPAAAAAALSRPHRSSTTTTSSLPAHP 340
             AA AA         TA    + +T   P  +A AA  A    P  ++T  T++  A  
Sbjct: 195 ATAATAATA------ATAATAATAATAATPARAARAATPATAPTPATAATPATAATAATA 248

Query: 341 PRWQHPWRRAWPVASAAAA 397
           P    P R A     A AA
Sbjct: 249 PTAATPARAARAATPATAA 267

 Score = 30.4 bits (67), Expect = 9.8
 Identities = 30/91 (32%), Positives = 37/91 (39%), Gaps = 1/91 (1%)
 Frame = +2

Query: 2   SAGAPAATATAPQQPSAHRH*ATAPTAPTRQSPARPLRPPSPPP-TPPR*PPTARCCAAQ 178
           +  A AATA            ATA TA T  +PAR  R  +P     P   PTA   A  
Sbjct: 423 ATAATAATAATAATA------ATAATAATAPTPARAARAATPATGATPATAPTAGTAATA 476

Query: 179 AAAPRPWTHWRTAFRRISTSTLPWPCSAPAA 271
           A A    T  R +    +T+  P   + PAA
Sbjct: 477 ATAATAATPARAS--TPATAATPVTAATPAA 505



EST assemble image


clone accession position
1 MXL060d11_r BP096542 1 458
2 MXL089f11_r BP098228 1 447




Chlamydomonas reinhardtii
Kazusa DNA Research Institute