KCC003494A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003494A_C01 KCC003494A_c01
ttcggCTGGACCGCCCCCGCCAGCTCGGTCACGCCCACCTCAGTGTCTGCGTCGACCAAG
ACCTCGGGCTTCGCCAGCTGCCTCGCGCGCCTGCGCAGCAAGGGCCACGGCAGCAAGGCC
GCTGCGGCTGCCGCCAGCTGCTGCCTTCACCGAGGTGACCAGCGCCACCTGCGGCACCAC
CGCCGCGCCCACCTCGCCCACCTGCGCCTCCACGCCCACCACCGCCACCAGCGGCGCCAC
GCCATGCAGCAACGCCCTGCAGCAGTCGTCGCAGGATGGCGGTCTGGTCCGCGTCCTTCT
CCGCCTCTCTTTCGCAGCAGCAGCAGCAGCAGCAGCGGGCCCAGCAACGGGCGCCTACTT
GCGCCGAGGCCGCGCCCATGCAGC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003494A_C01 KCC003494A_c01
         (384 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

sp|P21997|SSGP_VOLCA SULFATED SURFACE GLYCOPROTEIN 185 (SSG 185)...    54  9e-09
gb|AAQ73927.1| erythrocyte membrane protein 1 [Plasmodium falcip...    54  2e-08
emb|CAB88653.2| hypothetical protein [Neurospora crassa]               58  3e-08
pir||T48814 hypothetical protein 15E6.220 [imported] - Neurospor...    58  3e-08
pir||S22697 extensin - Volvox carteri (fragment) gi|21992|emb|CA...    49  4e-08

>sp|P21997|SSGP_VOLCA SULFATED SURFACE GLYCOPROTEIN 185 (SSG 185) gi|99441|pir||A33647
           sulfated surface glycoprotein 185 - Volvox carteri
           gi|1405821|emb|CAA35953.1| SULFATED SURFACE GLYCOPROTEIN
           185 [Volvox carteri]
          Length = 485

 Score = 53.9 bits (128), Expect(2) = 9e-09
 Identities = 22/43 (51%), Positives = 24/43 (55%)
 Frame = +3

Query: 144 PSPR*PAPPAAPPPRPPRPPAPPRPPPPPAAPRHAATPCSSRR 272
           P P  P PP  PPP PP PP PP PPPPP  P    +P   R+
Sbjct: 260 PPPPPPPPPPPPPPPPPSPPPPPPPPPPPPPPPPPPSPSPPRK 302

 Score = 51.2 bits (121), Expect = 3e-06
 Identities = 23/44 (52%), Positives = 23/44 (52%)
 Frame = +3

Query: 144 PSPR*PAPPAAPPPRPPRPPAPPRPPPPPAAPRHAATPCSSRRR 275
           PSP  P PP  PPP PP P  PP PPPPP  P     P  S  R
Sbjct: 258 PSPPPPPPPPPPPPPPPPPSPPPPPPPPPPPPPPPPPPSPSPPR 301

 Score = 50.4 bits (119), Expect = 6e-06
 Identities = 20/32 (62%), Positives = 20/32 (62%)
 Frame = +3

Query: 144 PSPR*PAPPAAPPPRPPRPPAPPRPPPPPAAP 239
           PSP  P PP  PPP PP PP  P PPPPP  P
Sbjct: 256 PSPSPPPPPPPPPPPPPPPPPSPPPPPPPPPP 287

 Score = 50.1 bits (118), Expect = 8e-06
 Identities = 22/38 (57%), Positives = 23/38 (59%)
 Frame = +3

Query: 144 PSPR*PAPPAAPPPRPPRPPAPPRPPPPPAAPRHAATP 257
           PSPR P+PP  P P PP PP PP PPPPP  P     P
Sbjct: 246 PSPRPPSPPP-PSPSPPPPPPPPPPPPPPPPPSPPPPP 282

 Score = 49.7 bits (117), Expect = 1e-05
 Identities = 20/38 (52%), Positives = 22/38 (57%)
 Frame = +3

Query: 144 PSPR*PAPPAAPPPRPPRPPAPPRPPPPPAAPRHAATP 257
           P P  P P   PPP PP PP PP PPP P+ PR   +P
Sbjct: 269 PPPPPPPPSPPPPPPPPPPPPPPPPPPSPSPPRKPPSP 306

 Score = 49.7 bits (117), Expect = 1e-05
 Identities = 22/40 (55%), Positives = 24/40 (60%)
 Frame = +3

Query: 144 PSPR*PAPPAAPPPRPPRPPAPPRPPPPPAAPRHAATPCS 263
           P P  P PP +PPP PP PP PP PPPPP +P     P S
Sbjct: 267 PPPPPPPPPPSPPPPPPPPPPPP-PPPPPPSPSPPRKPPS 305

 Score = 49.3 bits (116), Expect = 1e-05
 Identities = 23/51 (45%), Positives = 25/51 (48%)
 Frame = +3

Query: 105 PRQQGRCGCRQLLPSPR*PAPPAAPPPRPPRPPAPPRPPPPPAAPRHAATP 257
           P  Q     R   P P  P PP+ PPP P  PP PP PPPPP  P  +  P
Sbjct: 231 PSPQPTASSRPPSPPPS-PRPPSPPPPSPSPPPPPPPPPPPPPPPPPSPPP 280

 Score = 48.9 bits (115), Expect = 2e-05
 Identities = 19/32 (59%), Positives = 20/32 (62%)
 Frame = +3

Query: 144 PSPR*PAPPAAPPPRPPRPPAPPRPPPPPAAP 239
           P P  P+PP  PPP PP PP PP  PPPP  P
Sbjct: 253 PPPPSPSPPPPPPPPPPPPPPPPPSPPPPPPP 284

 Score = 46.2 bits (108), Expect = 1e-04
 Identities = 18/32 (56%), Positives = 20/32 (62%)
 Frame = +3

Query: 144 PSPR*PAPPAAPPPRPPRPPAPPRPPPPPAAP 239
           P P  P PP  PPP PP  P+PPR PP P+ P
Sbjct: 278 PPPPPPPPPPPPPPPPPPSPSPPRKPPSPSPP 309

 Score = 43.1 bits (100), Expect = 0.001
 Identities = 18/38 (47%), Positives = 19/38 (49%)
 Frame = +3

Query: 144 PSPR*PAPPAAPPPRPPRPPAPPRPPPPPAAPRHAATP 257
           P P    PP  PPP PP PP PP  P PP  P   + P
Sbjct: 272 PPPPPSPPPPPPPPPPPPPPPPPPSPSPPRKPPSPSPP 309

 Score = 43.1 bits (100), Expect = 0.001
 Identities = 22/48 (45%), Positives = 24/48 (49%), Gaps = 6/48 (12%)
 Frame = +3

Query: 144 PSPR*PAPPAAPPPRPPRPPAPPRPPPP------PAAPRHAATPCSSR 269
           P P  P PP+  PPR P  P+PP PPPP      PAA       C SR
Sbjct: 287 PPPPPPPPPSPSPPRKPPSPSPPVPPPPSPPSVLPAATGFPFCECVSR 334

 Score = 42.4 bits (98), Expect = 0.002
 Identities = 25/49 (51%), Positives = 27/49 (55%), Gaps = 7/49 (14%)
 Frame = +3

Query: 138 LLPSPR*PA---PPAAPP-PRPPRPPAP---PRPPPPPAAPRHAATPCS 263
           L PSP+  A   PP+ PP PRPP PP P   P PPPPP  P     P S
Sbjct: 229 LPPSPQPTASSRPPSPPPSPRPPSPPPPSPSPPPPPPPPPPPPPPPPPS 277

 Score = 41.6 bits (96), Expect = 0.003
 Identities = 18/33 (54%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +3

Query: 144 PSPR*PAPPAAPPPRPPR-PPAPPRPPPPPAAP 239
           P P  P PP  P P PPR PP+P  P PPP +P
Sbjct: 284 PPPPPPPPPPPPSPSPPRKPPSPSPPVPPPPSP 316

 Score = 39.7 bits (91), Expect = 0.010
 Identities = 16/32 (50%), Positives = 16/32 (50%)
 Frame = +3

Query: 144 PSPR*PAPPAAPPPRPPRPPAPPRPPPPPAAP 239
           P P  P PP  PPP  P PP  P  P PP  P
Sbjct: 281 PPPPPPPPPPPPPPPSPSPPRKPPSPSPPVPP 312

 Score = 38.5 bits (88), Expect = 0.023
 Identities = 17/37 (45%), Positives = 22/37 (58%)
 Frame = +3

Query: 147 SPR*PAPPAAPPPRPPRPPAPPRPPPPPAAPRHAATP 257
           +P  PAP  +P P  P+P A  RPP PP +PR  + P
Sbjct: 218 NPIGPAPNNSPLPPSPQPTASSRPPSPPPSPRPPSPP 254

 Score = 36.6 bits (83), Expect = 0.088
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +3

Query: 159 PAPPAAPPPRPPRPPAPPRPPPPPAAPRHAATP 257
           P PP+  P    RPP+PP  P PP+ P  + +P
Sbjct: 228 PLPPSPQPTASSRPPSPPPSPRPPSPPPPSPSP 260

 Score = 32.3 bits (72), Expect = 1.7
 Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
 Frame = +3

Query: 147 SPR*PAPPAAPPPRPPRPPAPPR--PPPPPA 233
           SP  P+P      RPP PP  PR   PPPP+
Sbjct: 227 SPLPPSPQPTASSRPPSPPPSPRPPSPPPPS 257

 Score = 31.2 bits (69), Expect = 3.7
 Identities = 29/114 (25%), Positives = 38/114 (32%)
 Frame = +2

Query: 11  PPPPARSRPPQCLRRPRPRASPAASRACAARATAARPLRLPPAAAFTEVTSATCGTTAAP 190
           PPPP  S PP     P P   P        R   +    +PP  +   V  A  G     
Sbjct: 271 PPPPPPSPPPPPPPPPPPPPPPPPPSPSPPRKPPSPSPPVPPPPSPPSVLPAATGFPFC- 329

Query: 191 TSPTCASTPTTATSGATPCSNALQQSSQDGGLVRVLLRLSFAAAAAAAAGPATG 352
               C S   ++       +N    +   G   RV L++S   AAAA      G
Sbjct: 330 ---ECVSRSPSSYPWRVTVANVSAVTISGGAGERVCLKISVDNAAAATCNNGLG 380

 Score = 25.8 bits (55), Expect(2) = 9e-09
 Identities = 12/25 (48%), Positives = 13/25 (52%)
 Frame = +2

Query: 11  PPPPARSRPPQCLRRPRPRASPAAS 85
           P P A SRPP     PRP + P  S
Sbjct: 233 PQPTASSRPPSPPPSPRPPSPPPPS 257

>gb|AAQ73927.1| erythrocyte membrane protein 1 [Plasmodium falciparum]
          Length = 2322

 Score = 53.5 bits (127), Expect(2) = 2e-08
 Identities = 24/40 (60%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
 Frame = +3

Query: 144  PSPR*PAPPAAPPP--RPPRPPAPPRPPPPPAAPRHAATP 257
            P P  P PP+ PPP  RPP P  PP PPPPP APR  A P
Sbjct: 1698 PPPSRPPPPSRPPPPSRPPPPSRPPPPPPPPPAPRPPAEP 1737

 Score = 50.1 bits (118), Expect = 8e-06
 Identities = 25/65 (38%), Positives = 34/65 (51%), Gaps = 1/65 (1%)
 Frame = +3

Query: 78   LPRAPAQQGPRQQGRCGCRQL-LPSPR*PAPPAAPPPRPPRPPAPPRPPPPPAAPRHAAT 254
            +P +   +    + +C C++   P P  P PP+ PPP P RPP P RPPPP   P  +  
Sbjct: 1639 MPASLDNEPEEVKAKCTCQKAPQPPPSRPPPPSRPPP-PSRPPPPSRPPPPSRPPPPSRP 1697

Query: 255  PCSSR 269
            P  SR
Sbjct: 1698 PPPSR 1702

 Score = 47.4 bits (111), Expect = 5e-05
 Identities = 22/42 (52%), Positives = 24/42 (56%)
 Frame = +3

Query: 144  PSPR*PAPPAAPPPRPPRPPAPPRPPPPPAAPRHAATPCSSR 269
            P P  P PP+ PPP P RPP P RPPPP   P  +  P  SR
Sbjct: 1680 PPPSRPPPPSRPPP-PSRPPPPSRPPPPSRPPPPSRPPPPSR 1720

 Score = 47.4 bits (111), Expect = 5e-05
 Identities = 22/42 (52%), Positives = 24/42 (56%)
 Frame = +3

Query: 144  PSPR*PAPPAAPPPRPPRPPAPPRPPPPPAAPRHAATPCSSR 269
            P P  P PP+ PPP P RPP P RPPPP   P  +  P  SR
Sbjct: 1674 PPPSRPPPPSRPPP-PSRPPPPSRPPPPSRPPPPSRPPPPSR 1714

 Score = 46.6 bits (109), Expect = 9e-05
 Identities = 21/40 (52%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
 Frame = +3

Query: 144  PSPR*PAPPAAPPP--RPPRPPAPPRPPPPPAAPRHAATP 257
            P P  P PP+ PPP  RPP PP PP  P PPA P   + P
Sbjct: 1704 PPPSRPPPPSRPPPPSRPPPPPPPPPAPRPPAEPARDSGP 1743

 Score = 45.4 bits (106), Expect = 2e-04
 Identities = 20/38 (52%), Positives = 22/38 (57%)
 Frame = +3

Query: 144  PSPR*PAPPAAPPPRPPRPPAPPRPPPPPAAPRHAATP 257
            P P  P PP+ PPP P RPP P RPPPP   P  +  P
Sbjct: 1686 PPPSRPPPPSRPPP-PSRPPPPSRPPPPSRPPPPSRPP 1722

 Score = 36.6 bits (83), Expect = 0.088
 Identities = 17/38 (44%), Positives = 19/38 (49%), Gaps = 2/38 (5%)
 Frame = +3

Query: 144  PSPR*PAPPAAPPPRPP--RPPAPPRPPPPPAAPRHAA 251
            P P  P PP+ PPP PP    P PP  P   + P H A
Sbjct: 1710 PPPSRPPPPSRPPPPPPPPPAPRPPAEPARDSGPDHRA 1747

 Score = 30.4 bits (67), Expect = 6.3
 Identities = 17/47 (36%), Positives = 20/47 (42%)
 Frame = +3

Query: 81   PRAPAQQGPRQQGRCGCRQLLPSPR*PAPPAAPPPRPPRPPAPPRPP 221
            P  P++  P  +     R   PS   P PP  P PRPP  PA    P
Sbjct: 1697 PPPPSRPPPPSRPPPPSRPPPPSRPPPPPPPPPAPRPPAEPARDSGP 1743

 Score = 25.0 bits (53), Expect(2) = 2e-08
 Identities = 12/25 (48%), Positives = 12/25 (48%)
 Frame = +2

Query: 14   PPPARSRPPQCLRRPRPRASPAASR 88
            P P  SRPP   R P P   P  SR
Sbjct: 1660 PQPPPSRPPPPSRPPPPSRPPPPSR 1684

>emb|CAB88653.2| hypothetical protein [Neurospora crassa]
          Length = 1992

 Score = 58.2 bits (139), Expect = 3e-08
 Identities = 27/61 (44%), Positives = 32/61 (52%)
 Frame = +3

Query: 75  QLPRAPAQQGPRQQGRCGCRQLLPSPR*PAPPAAPPPRPPRPPAPPRPPPPPAAPRHAAT 254
           Q+ +   QQ  +Q      +Q  P P  P PPA+PPP PP PP PP PPPPP  P     
Sbjct: 19  QIDQQQQQQQQQQHQEQKQQQQQPPPPPPPPPASPPPPPPPPPPPPPPPPPPPPPEPEPQ 78

Query: 255 P 257
           P
Sbjct: 79  P 79

 Score = 48.9 bits (115), Expect = 2e-05
 Identities = 25/59 (42%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = +3

Query: 84   RAPAQQG-PRQQGRCGCRQLLPSPR*PAPPAAPPPRPPRPPAPPRPPPPPAAPRHAATP 257
            +APAQQ  P  Q +      + S   P PP   PP PP PP P   PPPP  P  A  P
Sbjct: 1917 QAPAQQQRPPAQAQAPATPTITSAAPPRPPTLAPPPPPPPPPPTEDPPPPPPPPPAEAP 1975

 Score = 47.0 bits (110), Expect = 7e-05
 Identities = 21/53 (39%), Positives = 27/53 (50%)
 Frame = +3

Query: 81  PRAPAQQGPRQQGRCGCRQLLPSPR*PAPPAAPPPRPPRPPAPPRPPPPPAAP 239
           P+    Q  +QQ +   ++     + P PP  PPP  P PP PP PPPPP  P
Sbjct: 16  PQPQIDQQQQQQQQQQHQEQKQQQQQPPPPPPPPPASPPPPPPPPPPPPPPPP 68

 Score = 43.5 bits (101), Expect = 7e-04
 Identities = 20/40 (50%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
 Frame = +3

Query: 144  PSPR*PAPPAAPPPRPPRPP---APPRPPPPPAAPRHAAT 254
            P P  P PP   PP PP PP   APP PPP P  P  A++
Sbjct: 1951 PPPPPPPPPTEDPPPPPPPPPAEAPPPPPPTPLMPTSASS 1990

 Score = 40.4 bits (93), Expect = 0.006
 Identities = 45/128 (35%), Positives = 50/128 (38%), Gaps = 15/128 (11%)
 Frame = +2

Query: 17   PPARSRPPQCLRRPRPRASPAASRACAARATAARPLRLPPAAAFTEVTSATC-----GTT 181
            P A   PPQ L+ P+P   P      A +A A      PPA A    T  T      GT 
Sbjct: 961  PGASQHPPQHLQTPQPGVPPQQPPRPAYQAAAQTS---PPAQAQVYGTPPTAARQMSGTP 1017

Query: 182  AAPTSPTCASTP----TTATSGATPCSNALQQS------SQDGGLVRVLLRLSFAAAAAA 331
            AA  S    S P      A SGATP S A Q S      SQ  G+ RV    + A     
Sbjct: 1018 AATYSSPYVSRPPMPTVAAQSGATPHSMARQHSLPVSGPSQANGIPRVNPPPATANTGVP 1077

Query: 332  AAGPATGA 355
             AG A  A
Sbjct: 1078 VAGGARPA 1085

 Score = 40.0 bits (92), Expect = 0.008
 Identities = 18/35 (51%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = +3

Query: 138  LLPSPR*PAPPAAPPPRPPRPPAPPR-PPPPPAAP 239
            L P P  P PP    P PP PP P   PPPPP  P
Sbjct: 1948 LAPPPPPPPPPPTEDPPPPPPPPPAEAPPPPPPTP 1982

 Score = 39.7 bits (91), Expect = 0.010
 Identities = 34/118 (28%), Positives = 51/118 (42%), Gaps = 5/118 (4%)
 Frame = +2

Query: 20   PARSRPPQCLRRPRPRASPAASRACAARATAARPLRLPPAA--AFTEVTSATCGTTAAPT 193
            PA S      R P   A+P A  +    ++  RP+   P      T   +A+ G +A   
Sbjct: 1423 PAGSGNASISRAPPSTAAPTAPTSVPPVSSTVRPMSYVPTGPPGLTAPPTASSGASAGYA 1482

Query: 194  SPTCASTPTTATSGATPCSNALQQ---SSQDGGLVRVLLRLSFAAAAAAAAGPATGAY 358
             P  AST    TSG    ++A+ Q   S +   L    + +  A AAA+ + PA+G Y
Sbjct: 1483 RPANASTMPAPTSGQAAMTSAVPQSVPSPRPSSLTTGQMGVP-AIAAASTSRPASGVY 1539

 Score = 30.4 bits (67), Expect = 6.3
 Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 4/55 (7%)
 Frame = +3

Query: 87   APAQQGPRQQ--GRCGCRQLLP--SPR*PAPPAAPPPRPPRPPAPPRPPPPPAAP 239
            AP    P+ Q  G+   +Q  P    + PA P      PPRPP     PPPP  P
Sbjct: 1904 APVPSQPQHQITGQAPAQQQRPPAQAQAPATPTITSAAPPRPPT--LAPPPPPPP 1956

>pir||T48814 hypothetical protein 15E6.220 [imported] - Neurospora crassa
          Length = 1952

 Score = 58.2 bits (139), Expect = 3e-08
 Identities = 27/61 (44%), Positives = 32/61 (52%)
 Frame = +3

Query: 75  QLPRAPAQQGPRQQGRCGCRQLLPSPR*PAPPAAPPPRPPRPPAPPRPPPPPAAPRHAAT 254
           Q+ +   QQ  +Q      +Q  P P  P PPA+PPP PP PP PP PPPPP  P     
Sbjct: 24  QIDQQQQQQQQQQHQEQKQQQQQPPPPPPPPPASPPPPPPPPPPPPPPPPPPPPPEPEPQ 83

Query: 255 P 257
           P
Sbjct: 84  P 84

 Score = 48.9 bits (115), Expect = 2e-05
 Identities = 25/59 (42%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = +3

Query: 84   RAPAQQG-PRQQGRCGCRQLLPSPR*PAPPAAPPPRPPRPPAPPRPPPPPAAPRHAATP 257
            +APAQQ  P  Q +      + S   P PP   PP PP PP P   PPPP  P  A  P
Sbjct: 1877 QAPAQQQRPPAQAQAPATPTITSAAPPRPPTLAPPPPPPPPPPTEDPPPPPPPPPAEAP 1935

 Score = 47.0 bits (110), Expect = 7e-05
 Identities = 21/53 (39%), Positives = 27/53 (50%)
 Frame = +3

Query: 81  PRAPAQQGPRQQGRCGCRQLLPSPR*PAPPAAPPPRPPRPPAPPRPPPPPAAP 239
           P+    Q  +QQ +   ++     + P PP  PPP  P PP PP PPPPP  P
Sbjct: 21  PQPQIDQQQQQQQQQQHQEQKQQQQQPPPPPPPPPASPPPPPPPPPPPPPPPP 73

 Score = 43.5 bits (101), Expect = 7e-04
 Identities = 20/40 (50%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
 Frame = +3

Query: 144  PSPR*PAPPAAPPPRPPRPP---APPRPPPPPAAPRHAAT 254
            P P  P PP   PP PP PP   APP PPP P  P  A++
Sbjct: 1911 PPPPPPPPPTEDPPPPPPPPPAEAPPPPPPTPLMPTSASS 1950

 Score = 40.4 bits (93), Expect = 0.006
 Identities = 45/128 (35%), Positives = 50/128 (38%), Gaps = 15/128 (11%)
 Frame = +2

Query: 17   PPARSRPPQCLRRPRPRASPAASRACAARATAARPLRLPPAAAFTEVTSATC-----GTT 181
            P A   PPQ L+ P+P   P      A +A A      PPA A    T  T      GT 
Sbjct: 921  PGASQHPPQHLQTPQPGVPPQQPPRPAYQAAAQTS---PPAQAQVYGTPPTAARQMSGTP 977

Query: 182  AAPTSPTCASTP----TTATSGATPCSNALQQS------SQDGGLVRVLLRLSFAAAAAA 331
            AA  S    S P      A SGATP S A Q S      SQ  G+ RV    + A     
Sbjct: 978  AATYSSPYVSRPPMPTVAAQSGATPHSMARQHSLPVSGPSQANGIPRVNPPPATANTGVP 1037

Query: 332  AAGPATGA 355
             AG A  A
Sbjct: 1038 VAGGARPA 1045

 Score = 40.0 bits (92), Expect = 0.008
 Identities = 18/35 (51%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = +3

Query: 138  LLPSPR*PAPPAAPPPRPPRPPAPPR-PPPPPAAP 239
            L P P  P PP    P PP PP P   PPPPP  P
Sbjct: 1908 LAPPPPPPPPPPTEDPPPPPPPPPAEAPPPPPPTP 1942

 Score = 39.7 bits (91), Expect = 0.010
 Identities = 34/118 (28%), Positives = 51/118 (42%), Gaps = 5/118 (4%)
 Frame = +2

Query: 20   PARSRPPQCLRRPRPRASPAASRACAARATAARPLRLPPAA--AFTEVTSATCGTTAAPT 193
            PA S      R P   A+P A  +    ++  RP+   P      T   +A+ G +A   
Sbjct: 1383 PAGSGNASISRAPPSTAAPTAPTSVPPVSSTVRPMSYVPTGPPGLTAPPTASSGASAGYA 1442

Query: 194  SPTCASTPTTATSGATPCSNALQQ---SSQDGGLVRVLLRLSFAAAAAAAAGPATGAY 358
             P  AST    TSG    ++A+ Q   S +   L    + +  A AAA+ + PA+G Y
Sbjct: 1443 RPANASTMPAPTSGQAAMTSAVPQSVPSPRPSSLTTGQMGVP-AIAAASTSRPASGVY 1499

 Score = 30.4 bits (67), Expect = 6.3
 Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 4/55 (7%)
 Frame = +3

Query: 87   APAQQGPRQQ--GRCGCRQLLP--SPR*PAPPAAPPPRPPRPPAPPRPPPPPAAP 239
            AP    P+ Q  G+   +Q  P    + PA P      PPRPP     PPPP  P
Sbjct: 1864 APVPSQPQHQITGQAPAQQQRPPAQAQAPATPTITSAAPPRPPT--LAPPPPPPP 1916

>pir||S22697 extensin - Volvox carteri (fragment) gi|21992|emb|CAA46283.1|
           extensin [Volvox carteri]
          Length = 464

 Score = 49.3 bits (116), Expect = 1e-05
 Identities = 25/49 (51%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
 Frame = +3

Query: 144 PSPR*--PAPPAA---PPPRPPRPPAPPRPPPPPAAPRHAATPCSSRRR 275
           P PR   P PPA+   PPPRPP P  PP PPPP  A  +  +P  SR R
Sbjct: 369 PPPRASPPPPPASSPPPPPRPPPPSPPPSPPPPATAAANPPSPAPSRSR 417

 Score = 44.3 bits (103), Expect = 4e-04
 Identities = 28/74 (37%), Positives = 34/74 (45%), Gaps = 12/74 (16%)
 Frame = +3

Query: 81  PRAPAQQGPRQQGRCGCRQLLPSPR*PAPPAAPPPRPPR----------PPAPPRPPP-- 224
           P  P+   PR        +  PSP  P P  +PPP PPR          PP PPRPPP  
Sbjct: 336 PPPPSPPPPRPSPSPPPPRSSPSP--PPPVVSPPPPPPRASPPPPPASSPPPPPRPPPPS 393

Query: 225 PPAAPRHAATPCSS 266
           PP +P   AT  ++
Sbjct: 394 PPPSPPPPATAAAN 407

 Score = 43.1 bits (100), Expect = 0.001
 Identities = 20/36 (55%), Positives = 22/36 (60%), Gaps = 4/36 (11%)
 Frame = +3

Query: 144 PSPR*PAPPAAPPPRP-PRPPAP---PRPPPPPAAP 239
           P P  P PP+ PPPRP P PP P   P PPPP  +P
Sbjct: 331 PPPPSPPPPSPPPPRPSPSPPPPRSSPSPPPPVVSP 366

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 20/41 (48%), Positives = 24/41 (57%), Gaps = 3/41 (7%)
 Frame = +3

Query: 144 PSPR*PAPPAAPPPRP---PRPPAPPRPPPPPAAPRHAATP 257
           P PR    P+ PPP+P   P PP PPRP P P  PR + +P
Sbjct: 293 PPPR--VSPSPPPPQPVSSPPPPPPPRPSPSPPPPRSSPSP 331

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 21/44 (47%), Positives = 24/44 (53%), Gaps = 8/44 (18%)
 Frame = +3

Query: 150 PR*PAPPAAPPPRPPRP-----PAPPRP---PPPPAAPRHAATP 257
           P  P PP A PP PP P     P PP+P   PPPP  PR + +P
Sbjct: 279 PPSPPPPVASPPPPPPPRVSPSPPPPQPVSSPPPPPPPRPSPSP 322

 Score = 41.6 bits (96), Expect(3) = 4e-08
 Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
 Frame = +3

Query: 144 PSPR*PAPPAAPPPRPPRPPA--PPRPPPPPAAPRHAATP 257
           PSP  P    +PPP  P PP+  PPRP P P  PR + +P
Sbjct: 320 PSPPPPRSSPSPPPPSPPPPSPPPPRPSPSPPPPRSSPSP 359

 Score = 41.2 bits (95), Expect = 0.004
 Identities = 20/41 (48%), Positives = 22/41 (52%), Gaps = 1/41 (2%)
 Frame = +3

Query: 138 LLPSPR*PAPPAAPPPR-PPRPPAPPRPPPPPAAPRHAATP 257
           L  SP  P     PPPR PP PP P   PPPP  PR + +P
Sbjct: 261 LTASPPLPKTSPPPPPRVPPSPPPPVASPPPPPPPRVSPSP 301

 Score = 41.2 bits (95), Expect = 0.004
 Identities = 17/38 (44%), Positives = 20/38 (51%)
 Frame = +3

Query: 144 PSPR*PAPPAAPPPRPPRPPAPPRPPPPPAAPRHAATP 257
           P P  P+P   PP   P PP P  PPP P  PR + +P
Sbjct: 313 PPPPRPSPSPPPPRSSPSPPPPSPPPPSPPPPRPSPSP 350

 Score = 39.7 bits (91), Expect = 0.010
 Identities = 20/47 (42%), Positives = 23/47 (48%), Gaps = 6/47 (12%)
 Frame = +3

Query: 144 PSPR*PAPPAAPPPR------PPRPPAPPRPPPPPAAPRHAATPCSS 266
           P P   +PP  PPPR      PP+P + P PPPPP        P SS
Sbjct: 282 PPPPVASPPPPPPPRVSPSPPPPQPVSSPPPPPPPRPSPSPPPPRSS 328

 Score = 39.3 bits (90), Expect = 0.014
 Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 7/45 (15%)
 Frame = +3

Query: 144 PSPR*PAPPAAPPPRPP--RPPAPPRP-----PPPPAAPRHAATP 257
           PSP  P P ++PPP PP    P+PP P     PPPP+ P  +  P
Sbjct: 299 PSPPPPQPVSSPPPPPPPRPSPSPPPPRSSPSPPPPSPPPPSPPP 343

 Score = 38.1 bits (87), Expect = 0.030
 Identities = 17/36 (47%), Positives = 19/36 (52%)
 Frame = +3

Query: 159 PAPPAAPPPRPPRPPAPPRPPPPPAAPRHAATPCSS 266
           P PP+ PPP PP PP P   PPPP +      P  S
Sbjct: 331 PPPPSPPPPSPP-PPRPSPSPPPPRSSPSPPPPVVS 365

 Score = 38.1 bits (87), Expect = 0.030
 Identities = 19/41 (46%), Positives = 21/41 (50%)
 Frame = +3

Query: 144 PSPR*PAPPAAPPPRPPRPPAPPRPPPPPAAPRHAATPCSS 266
           PSP  P P ++P P PP PP P   PPPP        P SS
Sbjct: 318 PSPSPPPPRSSPSPPPPSPPPP--SPPPPRPSPSPPPPRSS 356

 Score = 37.7 bits (86), Expect = 0.040
 Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +3

Query: 144 PSPR*PAPPAAPPP-RPPRPPAPPRPPPPPAAPRHAATP 257
           P PR   PP+ PPP   P PP PPR  P P  P+  ++P
Sbjct: 274 PPPR--VPPSPPPPVASPPPPPPPRVSPSPPPPQPVSSP 310

 Score = 35.8 bits (81), Expect = 0.15
 Identities = 16/31 (51%), Positives = 16/31 (51%)
 Frame = +3

Query: 144 PSPR*PAPPAAPPPRPPRPPAPPRPPPPPAA 236
           PSP   A P  P   PP PP  P  PPPP A
Sbjct: 257 PSPVLTASPPLPKTSPPPPPRVPPSPPPPVA 287

 Score = 35.4 bits (80), Expect = 0.20
 Identities = 17/36 (47%), Positives = 18/36 (49%)
 Frame = +3

Query: 144 PSPR*PAPPAAPPPRPPRPPAPPRPPPPPAAPRHAA 251
           P PR   PP +PPP PP P      PP PA  R  A
Sbjct: 385 PPPR--PPPPSPPPSPPPPATAAANPPSPAPSRSRA 418

 Score = 34.7 bits (78), Expect = 0.34
 Identities = 17/43 (39%), Positives = 20/43 (45%), Gaps = 1/43 (2%)
 Frame = +3

Query: 144 PSPR*PAPPAAPPPRPPRPPAPPRPP-PPPAAPRHAATPCSSR 269
           P P  P PP+ PP  PP   A   PP P P+  R    P  +R
Sbjct: 384 PPPPRPPPPSPPPSPPPPATAAANPPSPAPSRSRAGGPPLGTR 426

 Score = 34.7 bits (78), Expect = 0.34
 Identities = 26/69 (37%), Positives = 26/69 (37%), Gaps = 7/69 (10%)
 Frame = +3

Query: 72  RQLPRAPAQQGPRQQGRCGCRQLLPSPR*PAPPAAPPPRPPR-------PPAPPRPPPPP 230
           R  P  P    P    R       PSP  PA  AA PP P         PP   RPPPPP
Sbjct: 372 RASPPPPPASSPPPPPRPPPPSPPPSPPPPATAAANPPSPAPSRSRAGGPPLGTRPPPPP 431

Query: 231 AAPRHAATP 257
             P   A P
Sbjct: 432 --PEDDAPP 438

 Score = 33.9 bits (76), Expect = 0.57
 Identities = 23/72 (31%), Positives = 28/72 (37%)
 Frame = +2

Query: 2   SAGPPPPARSRPPQCLRRPRPRASPAASRACAARATAARPLRLPPAAAFTEVTSATCGTT 181
           S  PPPP  S PP     P PRASP    A +       P   PP +     T+A    +
Sbjct: 356 SPSPPPPVVSPPP-----PPPRASPPPPPASSPPPPPRPPPPSPPPSPPPPATAAANPPS 410

Query: 182 AAPTSPTCASTP 217
            AP+       P
Sbjct: 411 PAPSRSRAGGPP 422

 Score = 33.1 bits (74), Expect = 0.98
 Identities = 30/95 (31%), Positives = 39/95 (40%), Gaps = 2/95 (2%)
 Frame = +2

Query: 2   SAGPPPPARSRPPQCLRRPRPRASPAASRAC-AARATAARPLRLPPAAAFTEVTSATCGT 178
           S  PPPP  S PP     PRP  SP   R+  +       P   PP A+     +++   
Sbjct: 328 SPSPPPP--SPPPPSPPPPRPSPSPPPPRSSPSPPPPVVSPPPPPPRASPPPPPASSPPP 385

Query: 179 TAAPTSPT-CASTPTTATSGATPCSNALQQSSQDG 280
              P  P+   S P  AT+ A P S A  +S   G
Sbjct: 386 PPRPPPPSPPPSPPPPATAAANPPSPAPSRSRAGG 420

 Score = 32.7 bits (73), Expect(3) = 4e-08
 Identities = 20/53 (37%), Positives = 25/53 (46%), Gaps = 7/53 (13%)
 Frame = +2

Query: 2   SAGPPPPAR--SRPPQCLRRPRPRASPAASRACAA-----RATAARPLRLPPA 139
           S  PPPPAR  S PP   R P PR   + S    A     + +   P R+PP+
Sbjct: 229 STSPPPPARVSSSPPPATRSPPPRRITSPSPVLTASPPLPKTSPPPPPRVPPS 281

 Score = 32.7 bits (73), Expect = 1.3
 Identities = 20/59 (33%), Positives = 24/59 (39%)
 Frame = +3

Query: 81  PRAPAQQGPRQQGRCGCRQLLPSPR*PAPPAAPPPRPPRPPAPPRPPPPPAAPRHAATP 257
           P A     P    R    + + SP  P   A+PP     PP PPR PP P  P  +  P
Sbjct: 234 PPARVSSSPPPATRSPPPRRITSPS-PVLTASPPLPKTSPPPPPRVPPSPPPPVASPPP 291

 Score = 31.2 bits (69), Expect = 3.7
 Identities = 20/74 (27%), Positives = 27/74 (36%), Gaps = 2/74 (2%)
 Frame = +2

Query: 2   SAGPPPPARSRPPQCLRRPRP--RASPAASRACAARATAARPLRLPPAAAFTEVTSATCG 175
           S+ PPP  RS PP+ +  P P   ASP   +          P   PP A+          
Sbjct: 239 SSSPPPATRSPPPRRITSPSPVLTASPPLPKTSPPPPPRVPPSPPPPVASPPPPPPPRVS 298

Query: 176 TTAAPTSPTCASTP 217
            +  P  P  +  P
Sbjct: 299 PSPPPPQPVSSPPP 312

 Score = 26.6 bits (57), Expect(2) = 3.3
 Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
 Frame = +3

Query: 159 PAPPA--APPPRPPRPPAPPRPPPPP 230
           P PP   APPP    PP     PPPP
Sbjct: 429 PPPPEDDAPPPDYYFPPPQDMSPPPP 454

 Score = 23.5 bits (49), Expect(2) = 3.3
 Identities = 17/43 (39%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
 Frame = +2

Query: 11  PPPPARSRPPQCLRRPRPRASPAASRACA-ARATAARPLRLPP 136
           PP P  S PP       P  SPA SR+ A       RP   PP
Sbjct: 391 PPSPPPSPPPPATAAANP-PSPAPSRSRAGGPPLGTRPPPPPP 432

 Score = 22.3 bits (46), Expect(3) = 4e-08
 Identities = 12/34 (35%), Positives = 15/34 (43%), Gaps = 4/34 (11%)
 Frame = +1

Query: 289 PRPSPPLFRSSSSSSSGPSNGRL----LAPRPRP 378
           P P PP   +++  S  PS  R     L  RP P
Sbjct: 396 PSPPPPATAAANPPSPAPSRSRAGGPPLGTRPPP 429



EST assemble image


clone accession position
1 MXL059e05_r BP096485 1 384
2 MXL077g10_r BP097564 6 368




Chlamydomonas reinhardtii
Kazusa DNA Research Institute