KCC003492A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003492A_C01 KCC003492A_c01
CTTGCGTCGCACATGCGTGCGCGCTTCTCGGCCAGCCGGCCAAACCAACCGCGCACAGTA
AGGCGCTGATATTTACTTTTAATTACATACTCTAGTAGCGCTTCAAGCGGCACCGATGCG
CAGCGCTTTGTGCGGGGGCCACGGCGTGGCAACACGCATGGCTCGCGCGGTTGTCGCGCC
TCAGGCGCCTGCGCGCCTCACATCCAGCCGGCAGATCTGGAATATGGCCAAGGGATTTGG
GCTAGGCTTCGCGAGCACCAAGCCTCTCCACAACCGGCCGCCGCTCAAGCAGGGCAAGGT
GTCTCCCAAGAGCCCTGTGCCGGCGCACATCCGGCGGCCGCCCTACGCCGACAAGGGCAA
CTTCCCGCCCTGGGCGGACCGCAGCCAGGTGCACAACGAGGAGGGCAAGCGCAAGATGCG
CGCCAGCGGCCGTCTGGCGGCTCAGGTGCTG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003492A_C01 KCC003492A_c01
         (451 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_172785.1| methionine aminopeptidase I (MAP1) -related [Ar...    60  7e-09
gb|AAG33975.1|AF250961_1 methionine aminopeptidase-like protein ...    60  7e-09
dbj|BAC83953.1| putative methionine aminopeptidase I (MAP1) [Ory...    57  7e-08
ref|NP_568014.1| methionyl aminopeptidase-related protein [Arabi...    57  7e-08
pir||E85437 methionyl aminopeptidase-like protein [imported] - A...    57  7e-08

>ref|NP_172785.1| methionine aminopeptidase I (MAP1) -related [Arabidopsis thaliana]
           gi|25402759|pir||C86267 probable methionine
           aminopeptidase [imported] - Arabidopsis thaliana
           gi|9958075|gb|AAG09564.1|AC011810_23 Putative methionine
           aminopeptidase [Arabidopsis thaliana]
           gi|23306398|gb|AAN17426.1| methionine aminopeptidase I
           (MAP1), putative [Arabidopsis thaliana]
           gi|24899771|gb|AAN65100.1| methionine aminopeptidase I
           (MAP1), putative [Arabidopsis thaliana]
          Length = 369

 Score = 60.1 bits (144), Expect = 7e-09
 Identities = 29/62 (46%), Positives = 39/62 (62%)
 Frame = +2

Query: 266 LHNRPPLKQGKVSPKSPVPAHIRRPPYADKGNFPPWADRSQVHNEEGKRKMRASGRLAAQ 445
           +   PPL++G+VSP+  VP HI RPPY + G  P  +   Q+   EG  KMRA+  LAA+
Sbjct: 85  VRRNPPLRRGRVSPRLLVPDHIPRPPYVESGVLPDISSEFQIPGPEGIAKMRAACELAAR 144

Query: 446 VL 451
           VL
Sbjct: 145 VL 146

>gb|AAG33975.1|AF250961_1 methionine aminopeptidase-like protein [Arabidopsis thaliana]
          Length = 369

 Score = 60.1 bits (144), Expect = 7e-09
 Identities = 29/62 (46%), Positives = 39/62 (62%)
 Frame = +2

Query: 266 LHNRPPLKQGKVSPKSPVPAHIRRPPYADKGNFPPWADRSQVHNEEGKRKMRASGRLAAQ 445
           +   PPL++G+VSP+  VP HI RPPY + G  P  +   Q+   EG  KMRA+  LAA+
Sbjct: 85  VRRNPPLRRGRVSPRLLVPDHIPRPPYVESGVLPDISSEFQIPGPEGIAKMRAACELAAR 144

Query: 446 VL 451
           VL
Sbjct: 145 VL 146

>dbj|BAC83953.1| putative methionine aminopeptidase I (MAP1) [Oryza sativa (japonica
           cultivar-group)]
          Length = 357

 Score = 56.6 bits (135), Expect = 7e-08
 Identities = 27/59 (45%), Positives = 37/59 (61%)
 Frame = +2

Query: 275 RPPLKQGKVSPKSPVPAHIRRPPYADKGNFPPWADRSQVHNEEGKRKMRASGRLAAQVL 451
           RPPL++GK+SP+ PVP HI RP Y         +   Q+H+ EG   MRA+ +LAA+ L
Sbjct: 76  RPPLRRGKISPQLPVPEHIPRPSYVGSNRPQELSSVRQIHSAEGIAGMRAACKLAARAL 134

>ref|NP_568014.1| methionyl aminopeptidase-related protein [Arabidopsis thaliana]
           gi|11320960|gb|AAG33977.1|AF250963_1 methionine
           aminopeptidase-like protein [Arabidopsis thaliana]
           gi|21553973|gb|AAM63054.1| methionyl aminopeptidase-like
           protein [Arabidopsis thaliana]
           gi|26451668|dbj|BAC42930.1| putative ap2 methionine
           aminopeptidase [Arabidopsis thaliana]
           gi|28973551|gb|AAO64100.1| putative methionyl
           aminopeptidase [Arabidopsis thaliana]
          Length = 350

 Score = 56.6 bits (135), Expect = 7e-08
 Identities = 28/58 (48%), Positives = 37/58 (63%)
 Frame = +2

Query: 275 RPPLKQGKVSPKSPVPAHIRRPPYADKGNFPPWADRSQVHNEEGKRKMRASGRLAAQV 448
           R  L+ G VSP+ PVP HI +PPY D    P  +   +VH+++G   MRASG LAA+V
Sbjct: 69  RKRLRPGNVSPRRPVPGHITKPPYVDSLQAPGISSGLEVHDKKGIECMRASGILAARV 126

>pir||E85437 methionyl aminopeptidase-like protein [imported] - Arabidopsis
           thaliana gi|4006872|emb|CAB16790.1| methionyl
           aminopeptidase-like protein [Arabidopsis thaliana]
           gi|7270653|emb|CAB80370.1| methionyl aminopeptidase-like
           protein [Arabidopsis thaliana]
          Length = 305

 Score = 56.6 bits (135), Expect = 7e-08
 Identities = 28/58 (48%), Positives = 37/58 (63%)
 Frame = +2

Query: 275 RPPLKQGKVSPKSPVPAHIRRPPYADKGNFPPWADRSQVHNEEGKRKMRASGRLAAQV 448
           R  L+ G VSP+ PVP HI +PPY D    P  +   +VH+++G   MRASG LAA+V
Sbjct: 24  RKRLRPGNVSPRRPVPGHITKPPYVDSLQAPGISSGLEVHDKKGIECMRASGILAARV 81



EST assemble image


clone accession position
1 MXL058a04_r BP096388 1 451
2 MXL088g06_r BP098176 1 428
3 MXL088g05_r BP098175 1 425




Chlamydomonas reinhardtii
Kazusa DNA Research Institute