>KCC003490A_C01 KCC003490A_c01
GCCGGGGTCGGCAGGGGAGGACAGGTGATTAGCCAGGAGGCAGGTGTTCTTCTGGCACGC
ATACGGCTGCTGCAGTTACAAGACGTACGCATGGCTGGCACTGAAGCCTCGGAAAAACGC
ATGCTATTCACTGGGTACTGGGACAAATATAATAATCTGGTCATACTGAAACGCTTGCCC
ATGAGGTTGCGATTATTCCTGCACAGACATTTTTGGATGCAACGCACGCAATGGCGGGGG
GATACCTATGCTTGCCCTGGCAACGTGCGAATGTTTTGAACGCCTTCAATCTTTACGTAA
TGCAATAAGTGCAGCCTCGCGGTGAGGGCTGCGTTGTCTGAGGCTACACATCTGAGGCAC
ACCAGGGAGGCCATACATCGCCTCTGAAGCAGTACCCGCGGACTGCTCAAGC

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003490A_C01 KCC003490A_c01
         (412 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_879230.1| putative membrane protein [Bordetella pertussis...    35  0.25
ref|XP_304828.1| hypothetical protein XP_304828 [Homo sapiens]         33  0.94
ref|NP_172869.2| KH domain protein [Arabidopsis thaliana] gi|301...    32  1.6
pir||C86275 hypothetical protein [imported] - Arabidopsis thalia...    32  1.6
emb|CAD60718.1| unnamed protein product [Podospora anserina]           30  6.1

>ref|NP_879230.1| putative membrane protein [Bordetella pertussis]
           gi|33598665|ref|NP_886308.1| putative membrane protein
           [Bordetella parapertussis] gi|33603618|ref|NP_891178.1|
           putative membrane protein [Bordetella bronchiseptica]
           gi|33571229|emb|CAE44689.1| putative membrane protein
           [Bordetella pertussis] gi|33574794|emb|CAE39455.1|
           putative membrane protein [Bordetella parapertussis]
           gi|33577743|emb|CAE35008.1| putative membrane protein
           [Bordetella bronchiseptica]
          Length = 247

 Score = 35.0 bits (79), Expect = 0.25
 Identities = 17/49 (34%), Positives = 26/49 (52%)
 Frame = -3

Query: 182 MGKRFSMTRLLYLSQYPVNSMRFSEASVPAMRTSCNCSSRMRARRTPAS 36
           +G  FS+T L    +Y VN    S   +P +    +CSSR++ R  PA+
Sbjct: 175 IGASFSLTMLSLADRYGVNEFLLSVGLLPFLLLGFSCSSRLKERMRPAT 223

>ref|XP_304828.1| hypothetical protein XP_304828 [Homo sapiens]
          Length = 425

 Score = 33.1 bits (74), Expect = 0.94
 Identities = 17/43 (39%), Positives = 25/43 (57%)
 Frame = -2

Query: 342 LRQRSPHREAALIALRKD*RRSKHSHVARASIGIPPPLRALHP 214
           LR+ +P     L+ LR D + S H+  A A   +PPP+R+ HP
Sbjct: 363 LREAAPFASLHLVTLR-DMQPSPHAAAAAAPTILPPPMRSAHP 404

>ref|NP_172869.2| KH domain protein [Arabidopsis thaliana] gi|30102666|gb|AAP21251.1|
           At1g14170 [Arabidopsis thaliana]
          Length = 454

 Score = 32.3 bits (72), Expect = 1.6
 Identities = 23/62 (37%), Positives = 34/62 (54%)
 Frame = +1

Query: 7   VGRGGQVISQEAGVLLARIRLLQLQDVRMAGTEASEKRMLFTGYWDKYNNLVILKRLPMR 186
           +G+GG VIS+   V  A IR+LQ +DV     E  E+ +  TG  D    +  L ++ +R
Sbjct: 344 IGKGGAVISEMRSVTRANIRILQKEDVPKIARE-DEEMVQITGSPDA--AMKALTQVILR 400

Query: 187 LR 192
           LR
Sbjct: 401 LR 402

>pir||C86275 hypothetical protein [imported] - Arabidopsis thaliana
           gi|5080792|gb|AAD39302.1|AC007576_25 Unknown protein
           [Arabidopsis thaliana]
          Length = 479

 Score = 32.3 bits (72), Expect = 1.6
 Identities = 23/62 (37%), Positives = 34/62 (54%)
 Frame = +1

Query: 7   VGRGGQVISQEAGVLLARIRLLQLQDVRMAGTEASEKRMLFTGYWDKYNNLVILKRLPMR 186
           +G+GG VIS+   V  A IR+LQ +DV     E  E+ +  TG  D    +  L ++ +R
Sbjct: 369 IGKGGAVISEMRSVTRANIRILQKEDVPKIARE-DEEMVQITGSPDA--AMKALTQVILR 425

Query: 187 LR 192
           LR
Sbjct: 426 LR 427

>emb|CAD60718.1| unnamed protein product [Podospora anserina]
          Length = 1277

 Score = 30.4 bits (67), Expect = 6.1
 Identities = 15/52 (28%), Positives = 27/52 (51%)
 Frame = -3

Query: 188 NLMGKRFSMTRLLYLSQYPVNSMRFSEASVPAMRTSCNCSSRMRARRTPASW 33
           +++GK  +  R LY  Q P+N+  +S++SVP +    + +    A R    W
Sbjct: 490 HILGKAEAAFRTLYDGQPPLNAANYSKSSVPVLTVDTHATVIETALRGYIKW 541

EST assemble image

clone accession position 1 MXL059h11_r BP096514 1 408 2 MXL057a11_r BP096339 1 412

---