Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003485A_C01 KCC003485A_c01
(502 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAC38258.1| zinc-protease transporter [Pseudomonas fluorescens] 44 9e-04
dbj|BAB63831.1| P0459B04.15 [Oryza sativa (japonica cultivar-gro... 41 0.009
sp|P76072|STFR_ECOLI Side tail fiber protein homolog from lambdo... 39 0.027
ref|NP_415890.1| putative membrane protein [Escherichia coli K12... 39 0.027
sp|Q04503|DP87_DICDI Prespore protein DP87 precursor gi|217302|d... 39 0.036
>gb|AAC38258.1| zinc-protease transporter [Pseudomonas fluorescens]
Length = 471
Score = 44.3 bits (103), Expect = 9e-04
Identities = 41/123 (33%), Positives = 53/123 (42%), Gaps = 5/123 (4%)
Frame = -3
Query: 482 RAGWRSCAALAPEGCQTSPWDT*TPHCTAPRAPHCRGR----WPKPGRGARRGAGRAKPR 315
R+ WR AP +S + TAP R R WP+P R +RRG R++P
Sbjct: 147 RSNWRG-RRNAPTASSSSSTSASSSAATAPAPTPWRPRPASTWPRP-RKSRRGTARSRPA 204
Query: 314 RWGSRQWVEARSPRAGCHRAALLFSGPPGRSYPAFQRLVLPRR-MLPPTEAAEDLARL*V 138
R G+ A R G R L + RSY A++ L L L A D+AR V
Sbjct: 205 RTGAAGRGAAGDRRPGAARRTLPGAPAEPRSYTAWRDLALAENPELASLRHAVDVARYEV 264
Query: 137 ELN 129
E N
Sbjct: 265 EQN 267
>dbj|BAB63831.1| P0459B04.15 [Oryza sativa (japonica cultivar-group)]
Length = 499
Score = 40.8 bits (94), Expect = 0.009
Identities = 25/73 (34%), Positives = 31/73 (42%)
Frame = +3
Query: 195 KHKPLKSWIAATWWTRK*KSSTMTTRPRRPCFDPLPRTPPPRLGPSRPTTRPPSWLGPPS 374
+ +P + W T + T+ P P P PR PPPRL P R L P
Sbjct: 109 RRRPYRKWPLVTGLASLSFAPTVLLHPPSPLRQPPPRRPPPRLPPRR-------LLAPGL 161
Query: 375 PAMRRSWCRTVGR 413
PA RRS+ GR
Sbjct: 162 PAPRRSFSSIAGR 174
>sp|P76072|STFR_ECOLI Side tail fiber protein homolog from lambdoid prophage Rac
gi|1742233|dbj|BAA14966.1| Tail fiber protein GP37.
[Escherichia coli] gi|1742243|dbj|BAA14975.1| Tail fiber
protein GP37. [Escherichia coli]
Length = 1120
Score = 39.3 bits (90), Expect = 0.027
Identities = 33/99 (33%), Positives = 46/99 (46%), Gaps = 4/99 (4%)
Frame = -2
Query: 396 TTSAALPGKVAQARTGGASWGGKGQAEAVGFSAVGRSTVSAGGLSSCCSSIFGSTRSQLS 217
+ SAA K A A + A+ GQA A +A G+S SA +S ++ G Q S
Sbjct: 291 SASAAAGSKTAAASSASAASTSAGQASA-SATAAGKSAESAASSASTATTKAGEATEQAS 349
Query: 216 ----SFSAACASKTHAPAHRSSRRPSTALGGTKSISAIS 112
S SAA S+T+A A +S S + + SA S
Sbjct: 350 AAARSASAAKTSETNAKASETSAESSKTAAASSASSAAS 388
>ref|NP_415890.1| putative membrane protein [Escherichia coli K12]
gi|7466858|pir||G64887 probable tail fiber protein GP37
- Escherichia coli (strain K-12)
gi|1787636|gb|AAC74454.1| putative membrane protein
[Escherichia coli K12]
Length = 1122
Score = 39.3 bits (90), Expect = 0.027
Identities = 33/99 (33%), Positives = 46/99 (46%), Gaps = 4/99 (4%)
Frame = -2
Query: 396 TTSAALPGKVAQARTGGASWGGKGQAEAVGFSAVGRSTVSAGGLSSCCSSIFGSTRSQLS 217
+ SAA K A A + A+ GQA A +A G+S SA +S ++ G Q S
Sbjct: 293 SASAAAGSKTAAASSASAASTSAGQASA-SATAAGKSAESAASSASTATTKAGEATEQAS 351
Query: 216 ----SFSAACASKTHAPAHRSSRRPSTALGGTKSISAIS 112
S SAA S+T+A A +S S + + SA S
Sbjct: 352 AAARSASAAKTSETNAKASETSAESSKTAAASSASSAAS 390
>sp|Q04503|DP87_DICDI Prespore protein DP87 precursor gi|217302|dbj|BAA03083.1| Dp87
protein [Dictyostelium discoideum]
Length = 555
Score = 38.9 bits (89), Expect = 0.036
Identities = 32/94 (34%), Positives = 41/94 (43%)
Frame = -2
Query: 393 TSAALPGKVAQARTGGASWGGKGQAEAVGFSAVGRSTVSAGGLSSCCSSIFGSTRSQLSS 214
T+A+ A T G + GG + S+ S S+ SS SS S S S
Sbjct: 446 TTASTVATTTSATTAGTTTGGTTTGGSTSDSSAASSADSSAASSSPSSSAASSAASSEPS 505
Query: 213 FSAACASKTHAPAHRSSRRPSTALGGTKSISAIS 112
SAA +S AP+ SS PS+A S SA S
Sbjct: 506 SSAASSS---APSSASSSAPSSASSSAPSSSASS 536
Score = 38.9 bits (89), Expect = 0.036
Identities = 28/95 (29%), Positives = 43/95 (44%)
Frame = -2
Query: 396 TTSAALPGKVAQARTGGASWGGKGQAEAVGFSAVGRSTVSAGGLSSCCSSIFGSTRSQLS 217
TTSA G TGG + GG + SA + S+ S+ S+ S +
Sbjct: 454 TTSATTAGTT----TGGTTTGGSTSDSSAASSADSSAASSSPSSSAASSAASSEPSSSAA 509
Query: 216 SFSAACASKTHAPAHRSSRRPSTALGGTKSISAIS 112
S SA ++ + AP+ SS PS++ + + SA S
Sbjct: 510 SSSAPSSASSSAPSSASSSAPSSSASSSAASSAAS 544
