Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003484A_C01 KCC003484A_c01
(567 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAC39121.1| spinalin [Hydra magnipapillata] 47 2e-04
ref|NP_499936.1| putative nuclear protein (4B256) [Caenorhabditi... 47 2e-04
dbj|BAC04036.1| unnamed protein product [Homo sapiens] 45 5e-04
gb|AAF86213.1| VrrB [Bacillus anthracis] 45 9e-04
gb|AAF86214.1| VrrB [Bacillus anthracis] 45 9e-04
>gb|AAC39121.1| spinalin [Hydra magnipapillata]
Length = 254
Score = 47.0 bits (110), Expect = 2e-04
Identities = 43/136 (31%), Positives = 48/136 (34%), Gaps = 12/136 (8%)
Frame = +3
Query: 162 GANAPAGAKCTGGCAHARQRPQ*PGDWLAHYRGRSCR-CSRGGH-----GWRRRHPSPCK 323
G G+ GGC H + G AH+ C + GGH G H
Sbjct: 21 GPGCADGSYGYGGCGHHQAN----GYGGAHHAAGCCNGLAHGGHHGGAYGQAAHHAG--- 73
Query: 324 *EPGPGDGRWSRGHWHGGG------SHVCHGQQGHDATHHRTAGLRGGHHGRACYVGGHS 485
G G GH G +H H H HH GLRGGHHG GGH
Sbjct: 74 -----GYGGAYGGHHEDHGEDVKVETHGVHHIASHGGIHHEHGGLRGGHHGA---YGGHG 125
Query: 486 AQEHAAGGGRHRHTRH 533
A H AG H H H
Sbjct: 126 A--HEAGNFGHVHGGH 139
>ref|NP_499936.1| putative nuclear protein (4B256) [Caenorhabditis elegans]
gi|7508913|pir||T33997 hypothetical protein W03G1.5 -
Caenorhabditis elegans gi|4262637|gb|AAD14753.1|
Hypothetical protein W03G1.5 [Caenorhabditis elegans]
Length = 471
Score = 46.6 bits (109), Expect = 2e-04
Identities = 46/135 (34%), Positives = 49/135 (36%), Gaps = 3/135 (2%)
Frame = +3
Query: 138 HGVKTSAIGANAPAGAKCTGGCAHARQRPQ*PGDWLAHYRGRSCRCS---RGGHGWRRRH 308
HG S G+ P G GG H R G H R SC S R GHG H
Sbjct: 258 HGGHGSRSGS--PGGRHGHGGSGHHRG-----GRHGGHGRHGSCSGSPRGRHGHGGHGGH 310
Query: 309 PSPCK*EPGPGDGRWSRGHWHGGGSHVCHGQQGHDATHHRTAGLRGGHHGRACYVGGHSA 488
S G GR H HGG H G+ G H +G GG HG GG
Sbjct: 311 GS----RSGSPGGR----HGHGGSGHHRGGRHGGHGRHGSRSGSPGGRHGH----GGRHG 358
Query: 489 QEHAAGGGRHRHTRH 533
H G RH RH
Sbjct: 359 PPHCPG----RHGRH 369
Score = 45.8 bits (107), Expect = 4e-04
Identities = 38/123 (30%), Positives = 45/123 (35%)
Frame = +3
Query: 165 ANAPAGAKCTGGCAHARQRPQ*PGDWLAHYRGRSCRCSRGGHGWRRRHPSPCK*EPGPGD 344
+ +P G + GG +R PG GR GGHG R PG
Sbjct: 229 SGSPGGRRGHGGRHGSRSGS--PG-------GRHGHGGHGGHGSRSG-------SPGGRH 272
Query: 345 GRWSRGHWHGGGSHVCHGQQGHDATHHRTAGLRGGHHGRACYVGGHSAQEHAAGGGRHRH 524
G GH H GG H HG+ G + R GGH G G + G G HR
Sbjct: 273 GHGGSGH-HRGGRHGGHGRHGSCSGSPRGRHGHGGHGGHGSRSGSPGGRHGHGGSGHHRG 331
Query: 525 TRH 533
RH
Sbjct: 332 GRH 334
Score = 40.8 bits (94), Expect = 0.013
Identities = 48/154 (31%), Positives = 51/154 (32%), Gaps = 16/154 (10%)
Frame = +3
Query: 138 HGVKTSAIGANAPAGAKCTGGCAHARQRPQ*PGDWLAHYRGRSCRCSRGGHGWRRRHPSP 317
HG S G+ P G GG R PG H G S G HG RH S
Sbjct: 288 HGRHGSCSGS--PRGRHGHGGHGGHGSRSGSPGG--RHGHGGSGHHRGGRHGGHGRHGS- 342
Query: 318 CK*EPGPGDGRWSRGHWHGG----GSHVCHGQQGHDATHHRTAGLRG--------GHHG- 458
G GR G HG G H HG + H H G G GHHG
Sbjct: 343 ---RSGSPGGRHGHGGRHGPPHCPGRHGRHGSRSHSPRGHGHGGRHGPPHCPGRHGHHGP 399
Query: 459 -RACYVGGHSAQEHAAGGGRHRHTRH--RRQEPH 551
+ G S H G H H H R PH
Sbjct: 400 PHHHHHDGRSPSRH----GHHHHHHHGCRPFPPH 429
Score = 39.7 bits (91), Expect = 0.029
Identities = 24/67 (35%), Positives = 31/67 (45%), Gaps = 7/67 (10%)
Frame = +3
Query: 354 SRGHWHGGGSHVCHGQQGHDATHHRTAGLRGGHHGRACYVGGHSAQEHAAGG-------G 512
S G H G S G++GH H +G GG HG + GGH ++ + GG G
Sbjct: 220 SEGVEHRGRSGSPGGRRGHGGRHGSRSGSPGGRHGHGGH-GGHGSRSGSPGGRHGHGGSG 278
Query: 513 RHRHTRH 533
HR RH
Sbjct: 279 HHRGGRH 285
>dbj|BAC04036.1| unnamed protein product [Homo sapiens]
Length = 279
Score = 45.4 bits (106), Expect = 5e-04
Identities = 38/110 (34%), Positives = 41/110 (36%), Gaps = 18/110 (16%)
Frame = -3
Query: 559 ALRWGSWRRCR----VCR*RPPPAACSWAECPPT*HARPWWPPRRPA-------VRWWVA 413
A W WR R +C R P A + C P PW RP WW A
Sbjct: 46 AALWSWWRPPRSSPSLCALRGPGRAPT---CWPLRVRMPWRAGSRPCRVPASTTCGWWCA 102
Query: 412 SWP-------CWPWQTWLPPPCQWPRLQRPSPGPGSHLQGLGCRRRQPCP 284
SW WP + P PC PR P P P SH L R QPCP
Sbjct: 103 SWSSSWRLYVAWPCPSPSPSPCPCPR-PCPLPWPQSHPCLLPQPRSQPCP 151
>gb|AAF86213.1| VrrB [Bacillus anthracis]
Length = 130
Score = 44.7 bits (104), Expect = 9e-04
Identities = 23/64 (35%), Positives = 26/64 (39%)
Frame = +3
Query: 360 GHWHGGGSHVCHGQQGHDATHHRTAGLRGGHHGRACYVGGHSAQEHAAGGGRHRHTRHRR 539
GH H G H HG H H GHHG + G H Q H G H H H +
Sbjct: 13 GHHHHQGHHGHHGHHHHQGHH--------GHHGHHHHQGHHGHQGHHHHQGHHGHHGHHQ 64
Query: 540 QEPH 551
Q+ H
Sbjct: 65 QQVH 68
Score = 35.8 bits (81), Expect = 0.42
Identities = 20/60 (33%), Positives = 23/60 (38%)
Frame = +3
Query: 372 GGGSHVCHGQQGHDATHHRTAGLRGGHHGRACYVGGHSAQEHAAGGGRHRHTRHRRQEPH 551
GG V HG GH HH+ GHH + G H H G H H H + H
Sbjct: 2 GGFPQVIHGHHGHH--HHQGHHGHHGHHHHQGHHGHHGHHHHQ---GHHGHQGHHHHQGH 56
Score = 33.9 bits (76), Expect = 1.6
Identities = 25/80 (31%), Positives = 28/80 (34%), Gaps = 16/80 (20%)
Frame = +3
Query: 360 GHWHGGGSHVCHGQQ------GHDATHHRTAGLRG--GHHGRACYVGGHS--------AQ 491
GH H G H HG GH HH G G GHH + + GH Q
Sbjct: 25 GHHHHQGHHGHHGHHHHQGHHGHQG-HHHHQGHHGHHGHHQQQVHHHGHHHIHPQAILYQ 83
Query: 492 EHAAGGGRHRHTRHRRQEPH 551
H G H H H + H
Sbjct: 84 THQGHQGHHDHHGHHGHQGH 103
>gb|AAF86214.1| VrrB [Bacillus anthracis]
Length = 133
Score = 44.7 bits (104), Expect = 9e-04
Identities = 23/64 (35%), Positives = 26/64 (39%)
Frame = +3
Query: 360 GHWHGGGSHVCHGQQGHDATHHRTAGLRGGHHGRACYVGGHSAQEHAAGGGRHRHTRHRR 539
GH H G H HG H H GHHG + G H Q H G H H H +
Sbjct: 13 GHHHHQGHHGHHGHHHHQGHH--------GHHGHHHHQGHHGHQGHHHHQGHHGHHGHHQ 64
Query: 540 QEPH 551
Q+ H
Sbjct: 65 QQVH 68
Score = 35.8 bits (81), Expect = 0.42
Identities = 20/60 (33%), Positives = 23/60 (38%)
Frame = +3
Query: 372 GGGSHVCHGQQGHDATHHRTAGLRGGHHGRACYVGGHSAQEHAAGGGRHRHTRHRRQEPH 551
GG V HG GH HH+ GHH + G H H G H H H + H
Sbjct: 2 GGFPQVIHGHHGHH--HHQGHHGHHGHHHHQGHHGHHGHHHHQ---GHHGHQGHHHHQGH 56
Score = 33.9 bits (76), Expect = 1.6
Identities = 25/80 (31%), Positives = 28/80 (34%), Gaps = 16/80 (20%)
Frame = +3
Query: 360 GHWHGGGSHVCHGQQ------GHDATHHRTAGLRG--GHHGRACYVGGHS--------AQ 491
GH H G H HG GH HH G G GHH + + GH Q
Sbjct: 25 GHHHHQGHHGHHGHHHHQGHHGHQG-HHHHQGHHGHHGHHQQQVHHHGHHHIHPQAILYQ 83
Query: 492 EHAAGGGRHRHTRHRRQEPH 551
H G H H H + H
Sbjct: 84 THQGHQGHHDHHGHHGHQGH 103
