KCC003482A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003482A_C01 KCC003482A_c01
ctcctgtggtctttggTTAGGTACCAACCTGAGACTGCTTGCAAATGCCGTTCGGCGACA
AACACGAAAATCTAGGGTGTCGATAGACGTGTCATTAACGCATTTCAGCTTCATTGTCCA
ATTTGTGAAACCGGAGCGGGAGCGGGAGCGACAGTGAGCTTTCAAGAATGTCAAGACGGC
GAGACGGGGAGGGCGACCAGGCTCTGCCCCTGATAGAGAAGCCGGCCCCTAAGAAATCTA
CTCTTCTGACGGTTTGCCCTTTCATTCTGGGCAATGAGTTCTGTGAGCGCCTGGCGTATT
ATGGGCTCGCGACCAACTTGGTCATGTACATCTGCAATGTGATGGGAGGCGACCCCGCAG
ATGCGGCAATCCAGGTCAGCGT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003482A_C01 KCC003482A_c01
         (382 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

dbj|BAB62326.1| peptide transporter [Oryza sativa (japonica cult...    57  8e-08
gb|AAF20002.1|AF213936_1 amino acid/peptide transporter [Prunus ...    55  2e-07
dbj|BAB16458.1| putative peptide transport protein [Oryza sativa...    55  2e-07
dbj|BAC84592.1| putative peptide transport protein [Oryza sativa...    55  2e-07
pir||E96648 hypothetical protein F19K23.13 [imported] - Arabidop...    54  4e-07

>dbj|BAB62326.1| peptide transporter [Oryza sativa (japonica cultivar-group)]
           gi|15076663|dbj|BAB62327.1| peptide transporter [Oryza
           sativa (japonica cultivar-group)]
          Length = 593

 Score = 56.6 bits (135), Expect = 8e-08
 Identities = 30/64 (46%), Positives = 38/64 (58%), Gaps = 1/64 (1%)
 Frame = +3

Query: 192 GDQALPLIEKPAPKKST-LLTVCPFILGNEFCERLAYYGLATNLVMYICNVMGGDPADAA 368
           GD ++     P  K+ T     CPFILGNE CERLAYYG++TNLV Y+   +    A AA
Sbjct: 35  GDGSVDFSGNPVVKERTGRWRACPFILGNECCERLAYYGISTNLVTYLTKKLHDGNASAA 94

Query: 369 IQVS 380
             V+
Sbjct: 95  SNVT 98

>gb|AAF20002.1|AF213936_1 amino acid/peptide transporter [Prunus dulcis]
          Length = 559

 Score = 55.5 bits (132), Expect = 2e-07
 Identities = 29/64 (45%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
 Frame = +3

Query: 192 GDQALPLIEKPAPKKST-LLTVCPFILGNEFCERLAYYGLATNLVMYICNVMGGDPADAA 368
           GD ++ +  KP  K+ST     CPFILG E CERLA+YG++TNLV Y+ + +      AA
Sbjct: 26  GDGSVDITGKPVLKQSTGNWXACPFILGTECCERLAFYGISTNLVTYLTHKLHEGNVSAA 85

Query: 369 IQVS 380
             V+
Sbjct: 86  RNVT 89

>dbj|BAB16458.1| putative peptide transport protein [Oryza sativa (japonica
           cultivar-group)] gi|13486884|dbj|BAB40113.1| putative
           peptide transport protein [Oryza sativa (japonica
           cultivar-group)]
          Length = 580

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 29/54 (53%), Positives = 37/54 (67%), Gaps = 1/54 (1%)
 Frame = +3

Query: 222 PAPKKST-LLTVCPFILGNEFCERLAYYGLATNLVMYICNVMGGDPADAAIQVS 380
           PA KK+T     CP+IL NE CERLAYYG++TNLV Y+   +G + A AA  V+
Sbjct: 21  PATKKNTGNWRACPYILANECCERLAYYGMSTNLVNYMKTRLGQESAIAANNVT 74

>dbj|BAC84592.1| putative peptide transport protein [Oryza sativa (japonica
           cultivar-group)]
          Length = 572

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 33/67 (49%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
 Frame = +3

Query: 183 DGEGDQALPLIEKPAPK-KSTLLTVCPFILGNEFCERLAYYGLATNLVMYICNVMGGDPA 359
           DG  D A     KPA + KS     CPFILGNE CERLAYYG++ NLV Y+ + +    A
Sbjct: 7   DGTTDHA----GKPAVRSKSGTWRACPFILGNECCERLAYYGMSANLVNYMVDRLRQGNA 62

Query: 360 DAAIQVS 380
            AA  V+
Sbjct: 63  GAAASVN 69

>pir||E96648 hypothetical protein F19K23.13 [imported] - Arabidopsis thaliana
           gi|2160144|gb|AAB60766.1| Strong similarity to
           Arabidopsis oligopeptide transporter (gb|X77503).
           [Arabidopsis thaliana]
          Length = 568

 Score = 54.3 bits (129), Expect = 4e-07
 Identities = 26/52 (50%), Positives = 32/52 (61%)
 Frame = +3

Query: 222 PAPKKSTLLTVCPFILGNEFCERLAYYGLATNLVMYICNVMGGDPADAAIQV 377
           P+ KK+     CPFILGNE CERLAYYG+A NL+ Y  + +      AA  V
Sbjct: 33  PSKKKTGNWKACPFILGNECCERLAYYGIAKNLITYYTSELHESNVSAASDV 84



EST assemble image


clone accession position
1 MXL050c06_r BP095968 1 382
2 MXL091h07_r BP098346 17 342




Chlamydomonas reinhardtii
Kazusa DNA Research Institute