Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003480A_C01 KCC003480A_c01
(474 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_00129208.1| hypothetical protein [Desulfovibrio desulfuri... 50 2e-05
gb|AAM93402.1| cpsT [Streptococcus thermophilus] 47 1e-04
emb|CAB52234.1| ORF2 [Streptococcus thermophilus] 47 1e-04
pir||JQ0406 hypothetical protein 1246 (uvrA region) - Micrococcu... 42 0.003
gb|AAK43960.1|AF370145_1 unknown protein [Arabidopsis thaliana] 42 0.005
>ref|ZP_00129208.1| hypothetical protein [Desulfovibrio desulfuricans G20]
Length = 412
Score = 49.7 bits (117), Expect = 2e-05
Identities = 19/52 (36%), Positives = 34/52 (64%)
Frame = +1
Query: 232 CVLAKNEHLYIREFIQYHHWIGIDKFYVWDHQSSPPMADVLEDYVLSSLVEV 387
C + K+E LY+ E++ YH +G + F ++D++S+ P+ D L ++ S LV V
Sbjct: 9 CAIVKDEDLYLEEWLHYHRLLGFEHFILFDNESARPLRDTLRHHIESGLVTV 60
>gb|AAM93402.1| cpsT [Streptococcus thermophilus]
Length = 310
Score = 47.0 bits (110), Expect = 1e-04
Identities = 19/70 (27%), Positives = 41/70 (58%)
Frame = +1
Query: 220 YVAACVLAKNEHLYIREFIQYHHWIGIDKFYVWDHQSSPPMADVLEDYVLSSLVEVFYFS 399
YV+ C + K+E Y++E+I+YH G+D Y++++ S+ V++ Y+ +++ +
Sbjct: 53 YVSICGIFKDEAFYLKEWIEYHKKAGVDHIYLYNNNSTDNYLTVIKPYLEEGYIDLINWP 112
Query: 400 DSWKADDAHH 429
S +A+H
Sbjct: 113 KSQAQMEAYH 122
>emb|CAB52234.1| ORF2 [Streptococcus thermophilus]
Length = 310
Score = 46.6 bits (109), Expect = 1e-04
Identities = 20/79 (25%), Positives = 44/79 (55%)
Frame = +1
Query: 220 YVAACVLAKNEHLYIREFIQYHHWIGIDKFYVWDHQSSPPMADVLEDYVLSSLVEVFYFS 399
YV+ C + K+E Y++E+I+YH G+D Y++++ S+ V++ Y +++ +
Sbjct: 53 YVSICGIFKDEAFYLKEWIEYHKKAGVDHIYLYNNNSTDNYLTVIKPYWEEGYIDLINWP 112
Query: 400 DSWKADDAHHRSLYNTSTR 456
S +A+H L ++ +
Sbjct: 113 KSQAQMEAYHDCLIDSEMK 131
>pir||JQ0406 hypothetical protein 1246 (uvrA region) - Micrococcus luteus
(fragment)
Length = 1246
Score = 42.4 bits (98), Expect = 0.003
Identities = 28/65 (43%), Positives = 32/65 (49%), Gaps = 9/65 (13%)
Frame = -3
Query: 472 GATGKRGWRCCTGTCGARRPPSTS---------PKNRTPRRGWRGRSPRARRPSAGCSGG 320
G G+RG C G C RRP T P+ R R G RGRSPR RR +AG G
Sbjct: 13 GRGGRRGCGCPPGRC--RRPGRTQAGARGTRARPRRRPARPGGRGRSPRTRRSAAG--RG 68
Query: 319 PTRKI 305
P R +
Sbjct: 69 PRRPV 73
>gb|AAK43960.1|AF370145_1 unknown protein [Arabidopsis thaliana]
Length = 575
Score = 41.6 bits (96), Expect = 0.005
Identities = 16/64 (25%), Positives = 36/64 (56%)
Frame = +1
Query: 166 FGHARQAKELPKQNPSHAYVAACVLAKNEHLYIREFIQYHHWIGIDKFYVWDHQSSPPMA 345
+G K+ K H + C + N+ ++RE+I YH W+G+++++++D+ S +
Sbjct: 275 YGSDSIEKKEKKSGVKHE-LCVCTMLWNQAPFLREWIMYHSWLGVERWFIYDNNSDDGIQ 333
Query: 346 DVLE 357
+ +E
Sbjct: 334 EEIE 337
