KCC003470A_c01
[Fasta Sequence]
[Nr Search]
[EST assemble image]
Fasta Sequence
>KCC003470A_C01 KCC003470A_c01
tccacctcttcagtcttttctagtcagaagaaaccatgcaggtcgcggctggctcggacg
gcattcagaagctgcttgcaGCGGAGGCTGAGGCCCAGCGCATTGTCGGCGACGCTCGCA
AGGCTAAGGCCGACCGCCTGCGCCAGGCTAAGGCTGAGGCCGAGAAAGAGATTGGTGCTT
ACCGGGCTGAGCGCGAGGGCGCCTACCAGAAGAAGATTGCCGAGGGATCCACCGGCTCGC
AAGCGACTTTCCAGCGGTTGCAGAGCGAGACCGGCCTGGCTGTGCAGAAGATCCAGGCCG
ATGTGAAGGCCAAGAAGGGCGAGGTCCTGGACATGCTCATGGGTTACGTCGGCGGCGTCA
AGTTCTAAGCGGCCGAACTAGCGAGCTGGCGGAGTTCGGACAGCGAAGCTGCATGCGCTG
GAGCATCGGCAGCGCACTGAGCAACTGCCACACCGTTGCGTGCGCGGTTTGGTTGGGGTT
TCTGTACAGTGAAGGGGGCGTGTACTGCCCCCTCTCTGTCATGAGAGTACTTTCGACGGT
ACACATGACTTCGATACACTTTTGACGCTTGACCACGGAGAGTGGGGTGTGATATCGACG
TTCGGACGTGCGCTAGCCGTATTGGCTAAACTGAGAGGGGAAAGGAGGACATATAGGCGG
GTAGATGGCTGGCATGGTTTGGAGGGGTGAACTCGCCCTGGTGTTTGccacgtatggctc
atgcaaggggcggaagtcgaccagggcaactttcgctccctttcaaatgtaaacgatatc
catagct
Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003470A_C01 KCC003470A_c01
(787 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAD41861.1| OSJNBa0041A02.8 [Oryza sativa (japonica cultivar... 92 9e-18
sp|O82702|VAG1_TOBAC Vacuolar ATP synthase subunit G 1 (V-ATPase... 89 1e-16
emb|CAD27444.1| vacuolar ATPase subunit G [Mesembryanthemum crys... 88 2e-16
ref|NP_186788.1| vacuolar membrane ATPase subunit G (AVMA10) [Ar... 87 3e-16
sp|Q9SP55|VATG_CITLI Vacuolar ATP synthase subunit G (V-ATPase G... 87 4e-16
>emb|CAD41861.1| OSJNBa0041A02.8 [Oryza sativa (japonica cultivar-group)]
gi|32492207|emb|CAE03475.1| OSJNBa0083N12.22 [Oryza
sativa (japonica cultivar-group)]
Length = 110
Score = 92.0 bits (227), Expect = 9e-18
Identities = 50/101 (49%), Positives = 68/101 (66%)
Frame = +3
Query: 60 GIQKLLAAEAEAQRIVGDARKAKADRLRQAKAEAEKEIGAYRAEREGAYQKKIAEGSTGS 239
GIQ+LLAAE EAQ+IV AR AK+ RLRQAK EAE+EI YRA+ E +Q+K+AE S S
Sbjct: 9 GIQQLLAAEQEAQQIVNAARAAKSARLRQAKEEAEREIAEYRAQMEAEFQRKVAESSGDS 68
Query: 240 QATFQRLQSETGLAVQKIQADVKAKKGEVLDMLMGYVGGVK 362
A +RL+ ET + +++ + EV+ ML+ +V VK
Sbjct: 69 GANVKRLEQETAEKIAQLKQQAASISPEVIQMLLRHVTTVK 109
>sp|O82702|VAG1_TOBAC Vacuolar ATP synthase subunit G 1 (V-ATPase G subunit 1) (Vacuolar
proton pump G subunit 1) gi|3717987|emb|CAA06756.1| G
subunit of Vacuolar-type H+-ATPase [Nicotiana tabacum]
Length = 110
Score = 88.6 bits (218), Expect = 1e-16
Identities = 48/109 (44%), Positives = 70/109 (64%)
Frame = +3
Query: 36 MQVAAGSDGIQKLLAAEAEAQRIVGDARKAKADRLRQAKAEAEKEIGAYRAEREGAYQKK 215
M ++G +GIQ LLAAE EAQ IV +AR AK RL+QAK EAEKEI +RA E +Q+K
Sbjct: 1 MASSSGQNGIQLLLAAEQEAQHIVNNARTAKQARLKQAKEEAEKEIAEFRAYMEAEFQRK 60
Query: 216 IAEGSTGSQATFQRLQSETGLAVQKIQADVKAKKGEVLDMLMGYVGGVK 362
+ + S S A +RL+ ET ++ ++ + + +V+ ML+ +V VK
Sbjct: 61 LEQTSGDSGANVKRLEQETDAKIEHLKTEAERVSPDVVQMLLRHVTTVK 109
>emb|CAD27444.1| vacuolar ATPase subunit G [Mesembryanthemum crystallinum]
Length = 109
Score = 87.8 bits (216), Expect = 2e-16
Identities = 45/105 (42%), Positives = 67/105 (62%)
Frame = +3
Query: 36 MQVAAGSDGIQKLLAAEAEAQRIVGDARKAKADRLRQAKAEAEKEIGAYRAEREGAYQKK 215
M+ + +GIQ LLAAE EAQ I+ A+ AK RLRQAK EAEKEI +RA+ E +Q++
Sbjct: 1 MEASRAQNGIQLLLAAEQEAQHIINAAKNAKTARLRQAKEEAEKEIAEFRAQMEADHQRR 60
Query: 216 IAEGSTGSQATFQRLQSETGLAVQKIQADVKAKKGEVLDMLMGYV 350
+AE + S A +RL+ ET +++++ V++ML+ YV
Sbjct: 61 LAESTGDSGANVKRLEQETNAKIEQLKIQASTISPYVVEMLLRYV 105
>ref|NP_186788.1| vacuolar membrane ATPase subunit G (AVMA10) [Arabidopsis thaliana]
gi|30678328|ref|NP_850489.1| vacuolar membrane ATPase
subunit G (AVMA10) [Arabidopsis thaliana]
gi|12585427|sp|O82628|VAG1_ARATH Vacuolar ATP synthase
subunit G 1 (V-ATPase G subunit 1) (Vacuolar proton pump
G subunit 1) gi|11279178|pir||T51825 H+-exporting ATPase
(EC 3.6.3.6) chain G, vacuolar [imported] - Arabidopsis
thaliana gi|3717946|emb|CAA06758.1| vag1 [Arabidopsis
thaliana] gi|5853315|gb|AAD54418.1| vacuolar membrane
ATPase subunit G [Arabidopsis thaliana]
gi|6692259|gb|AAF24609.1|AC010870_2 vacuolar membrane
ATPase subunit G (AVMA10) [Arabidopsis thaliana]
gi|18252861|gb|AAL62357.1| vacuolar membrane ATPase
subunit G (AVMA10) [Arabidopsis thaliana]
gi|21389701|gb|AAM48049.1| vacuolar membrane ATPase
subunit G AVMA10 [Arabidopsis thaliana]
Length = 110
Score = 87.0 bits (214), Expect = 3e-16
Identities = 48/109 (44%), Positives = 69/109 (63%)
Frame = +3
Query: 36 MQVAAGSDGIQKLLAAEAEAQRIVGDARKAKADRLRQAKAEAEKEIGAYRAEREGAYQKK 215
M+ G IQ+LLAAE EAQ IV AR AK RL+QAK EAEKEI Y+A+ E +Q+K
Sbjct: 1 MESNRGQGSIQQLLAAEVEAQHIVNAARTAKMARLKQAKEEAEKEIAEYKAQTEQDFQRK 60
Query: 216 IAEGSTGSQATFQRLQSETGLAVQKIQADVKAKKGEVLDMLMGYVGGVK 362
+ E S S A +RL+ ET +++++ + +V++ML+ +V VK
Sbjct: 61 LEETSGDSGANVKRLEQETDTKIEQLKNEASRISKDVVEMLLKHVTTVK 109
>sp|Q9SP55|VATG_CITLI Vacuolar ATP synthase subunit G (V-ATPase G subunit) (Vacuolar
proton pump G subunit) gi|5917785|gb|AAD56039.1|
vacuolar membrane ATPase subunit G [Citrus limon]
Length = 110
Score = 86.7 bits (213), Expect = 4e-16
Identities = 48/104 (46%), Positives = 67/104 (64%)
Frame = +3
Query: 51 GSDGIQKLLAAEAEAQRIVGDARKAKADRLRQAKAEAEKEIGAYRAEREGAYQKKIAEGS 230
G GIQ+LLAAE EAQ IV AR AK RL+QAK EAE+EI YRA+ E +Q+K+AE
Sbjct: 6 GQGGIQQLLAAEQEAQHIVAAARNAKMARLKQAKEEAEREIAEYRAQVEREFQRKLAESV 65
Query: 231 TGSQATFQRLQSETGLAVQKIQADVKAKKGEVLDMLMGYVGGVK 362
S A +RL+ ET + + ++A + + +V+ M + +V VK
Sbjct: 66 GDSGANVKRLEQETEVKIHHLKAGAEKIQYDVVQMFLKHVTTVK 109
EST assemble image
|
|
|
|
clone |
accession |
position |
1 |
MXL100d01_r |
BP098860 |
1 |
367 |
2 |
MXL068d03_r |
BP096993 |
192 |
615 |
3 |
MXL040e06_r |
BP095357 |
443 |
787 |
|
Chlamydomonas reinhardtii
Kazusa DNA Research Institute