KCC003469A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003469A_C01 KCC003469A_c01
ctgggcgacactacagtggagttctctgaccagttcaggttctacatcacgaccgcgctG
CGCAACCCGCACTACCTGCCCGAGACGGCGGTGAAGGTGACGCTGCTTAACTTCATGATC
ACACCCGACGGCCTGGCGGACCAGCTGCTGGGCGTGGTGGTGGCTCAAGAGCGGCCCGAC
CTGGAGGAGCAGCGCCAACAGCTGGTGGTGGAGAGCGCGGAGAACAAGAAGAAGCTGTCG
GAGATTGAGGACCGCATCCTGCACGTGCTGTCCTCGTCTCAGGGCAACATCCTTGAAGAC
GCGACCGCAATCCAGATCCTTTCGGAGGCCAAGGCGGTCTCCAACGAGATCCAGATCAAG
CAGGAGGCGGCGGAGGTGACGCAGAAGGCCATCGACGAGGCGCGCACCGGCTACGCGCCC
TGCGGCGCCTTCAACGCCAC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003469A_C01 KCC003469A_c01
         (440 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

dbj|BAA76788.2| KIAA0944 protein [Homo sapiens]                       205  1e-52
ref|NP_061720.1| axonemal dynein heavy chain 7 [Homo sapiens] gi...   205  1e-52
ref|XP_343569.1| similar to axonemal dynein heavy chain 7 [Rattu...   204  3e-52
pir||T30207 dynein heavy chain B2HC - sea urchin (Anthocidaris c...   195  1e-49
ref|XP_219388.2| similar to axonemal heavy chain dynein type 3 [...   188  2e-47

>dbj|BAA76788.2| KIAA0944 protein [Homo sapiens]
          Length = 4031

 Score =  205 bits (521), Expect = 1e-52
 Identities = 99/140 (70%), Positives = 121/140 (85%)
 Frame = +1

Query: 1    LGDTTVEFSDQFRFYITTALRNPHYLPETAVKVTLLNFMITPDGLADQLLGVVVAQERPD 180
            LGD+T+E++  FRFYITT LRNPHYLPET+VKVTLLNFMITP+G+ DQLLG+VVAQERPD
Sbjct: 3073 LGDSTIEYAPDFRFYITTKLRNPHYLPETSVKVTLLNFMITPEGMQDQLLGIVVAQERPD 3132

Query: 181  LEEQRQQLVVESAENKKKLSEIEDRILHVLSSSQGNILEDATAIQILSEAKAVSNEIQIK 360
            LEE++Q L+++ AENK++L EIED+IL VLSSS+GNILED TAI+ILS +KA++NEI  K
Sbjct: 3133 LEEEKQALILQGAENKRQLKEIEDKILEVLSSSEGNILEDETAIKILSSSKALANEISQK 3192

Query: 361  QEAAEVTQKAIDEARTGYAP 420
            QE AE T+K ID  R GY P
Sbjct: 3193 QEVAEETEKKIDTTRMGYRP 3212

>ref|NP_061720.1| axonemal dynein heavy chain 7 [Homo sapiens]
            gi|17225486|gb|AAL37427.1|AF327442_1 ciliary dynein heavy
            chain 7 [Homo sapiens]
          Length = 4024

 Score =  205 bits (521), Expect = 1e-52
 Identities = 99/140 (70%), Positives = 121/140 (85%)
 Frame = +1

Query: 1    LGDTTVEFSDQFRFYITTALRNPHYLPETAVKVTLLNFMITPDGLADQLLGVVVAQERPD 180
            LGD+T+E++  FRFYITT LRNPHYLPET+VKVTLLNFMITP+G+ DQLLG+VVAQERPD
Sbjct: 3066 LGDSTIEYAPDFRFYITTKLRNPHYLPETSVKVTLLNFMITPEGMQDQLLGIVVAQERPD 3125

Query: 181  LEEQRQQLVVESAENKKKLSEIEDRILHVLSSSQGNILEDATAIQILSEAKAVSNEIQIK 360
            LEE++Q L+++ AENK++L EIED+IL VLSSS+GNILED TAI+ILS +KA++NEI  K
Sbjct: 3126 LEEEKQALILQGAENKRQLKEIEDKILEVLSSSEGNILEDETAIKILSSSKALANEISQK 3185

Query: 361  QEAAEVTQKAIDEARTGYAP 420
            QE AE T+K ID  R GY P
Sbjct: 3186 QEVAEETEKKIDTTRMGYRP 3205

>ref|XP_343569.1| similar to axonemal dynein heavy chain 7 [Rattus norvegicus]
          Length = 688

 Score =  204 bits (518), Expect = 3e-52
 Identities = 98/140 (70%), Positives = 121/140 (86%)
 Frame = +1

Query: 1   LGDTTVEFSDQFRFYITTALRNPHYLPETAVKVTLLNFMITPDGLADQLLGVVVAQERPD 180
           LGD+T+E++  FRFYITT LRNPHYLPET+VKVTLLNFMITP+G+ DQLLG+VVA+ERPD
Sbjct: 77  LGDSTIEYAPDFRFYITTKLRNPHYLPETSVKVTLLNFMITPEGMQDQLLGIVVARERPD 136

Query: 181 LEEQRQQLVVESAENKKKLSEIEDRILHVLSSSQGNILEDATAIQILSEAKAVSNEIQIK 360
           LEE++Q L+++ AENK++L EIED+IL VLSSS+GNILED TAI+ILS +KA++NEI  K
Sbjct: 137 LEEEKQALILQGAENKRQLKEIEDKILEVLSSSEGNILEDETAIKILSSSKALANEISQK 196

Query: 361 QEAAEVTQKAIDEARTGYAP 420
           QE AE T+K ID  R GY P
Sbjct: 197 QEVAEETEKKIDNTRMGYRP 216

>pir||T30207 dynein heavy chain B2HC - sea urchin (Anthocidaris crassispina)
            (fragment) gi|4033608|dbj|BAA35136.1| B2HC [Anthocidaris
            crassispina]
          Length = 1169

 Score =  195 bits (495), Expect = 1e-49
 Identities = 93/140 (66%), Positives = 120/140 (85%)
 Frame = +1

Query: 1    LGDTTVEFSDQFRFYITTALRNPHYLPETAVKVTLLNFMITPDGLADQLLGVVVAQERPD 180
            LGD+T+E+S  FRFYITT LRNPHYLPET+VKVTLLNFMITP+ L DQLLG+VVA+ERP+
Sbjct: 917  LGDSTIEYSHDFRFYITTKLRNPHYLPETSVKVTLLNFMITPESLEDQLLGIVVAKERPE 976

Query: 181  LEEQRQQLVVESAENKKKLSEIEDRILHVLSSSQGNILEDATAIQILSEAKAVSNEIQIK 360
            LEE+R  L+++SA+NK++L+EIE++IL VLSSS+GNILED TAI++LS +K ++NEI  K
Sbjct: 977  LEEERNALIIQSADNKRQLNEIENKILEVLSSSEGNILEDETAIKVLSSSKVLANEISEK 1036

Query: 361  QEAAEVTQKAIDEARTGYAP 420
            Q  AE T+K I++ R GY P
Sbjct: 1037 QAVAEETEKMINKTRLGYKP 1056

>ref|XP_219388.2| similar to axonemal heavy chain dynein type 3 [Rattus norvegicus]
          Length = 2270

 Score =  188 bits (477), Expect = 2e-47
 Identities = 93/146 (63%), Positives = 116/146 (78%)
 Frame = +1

Query: 1    LGDTTVEFSDQFRFYITTALRNPHYLPETAVKVTLLNFMITPDGLADQLLGVVVAQERPD 180
            LG+  +E+S +F+FYITT LRNPHYLPE AVKV LLNFMITP GL DQLLG+V A+E+P+
Sbjct: 1277 LGENIIEYSREFKFYITTRLRNPHYLPEVAVKVCLLNFMITPLGLQDQLLGIVAAKEKPE 1336

Query: 181  LEEQRQQLVVESAENKKKLSEIEDRILHVLSSSQGNILEDATAIQILSEAKAVSNEIQIK 360
            LEE++ +L++ESAENKK+L EIED+IL VLS S+GNILED TAI++LS +K +S EI  K
Sbjct: 1337 LEEKKNKLILESAENKKQLKEIEDKILEVLSLSEGNILEDETAIKVLSSSKILSEEISEK 1396

Query: 361  QEAAEVTQKAIDEARTGYAPCGAFNA 438
            QE A VT+  IDE R GY P    +A
Sbjct: 1397 QEIASVTETQIDETRMGYKPVAIHSA 1422



EST assemble image


clone accession position
1 MXL038h11_r BP095257 1 322
2 MXL047b02_r BP095768 60 440




Chlamydomonas reinhardtii
Kazusa DNA Research Institute