Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003465A_C01 KCC003465A_c01
(448 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_862423.1| proline-rich extensin-like protein [Micrococcus... 33 0.015
sp|P33479|IE18_PRVKA IMMEDIATE-EARLY PROTEIN IE180 gi|418707|pir... 39 0.016
dbj|BAC86140.1| unnamed protein product [Homo sapiens] 39 0.016
emb|CAE04658.1| OSJNBa0061G20.14 [Oryza sativa (japonica cultiva... 29 0.019
dbj|BAC55974.1| similar to polyprotein [Oryza sativa (japonica c... 38 0.036
>ref|NP_862423.1| proline-rich extensin-like protein [Micrococcus sp. 28]
gi|18025411|gb|AAK62519.1| proline-rich extensin-like
protein [Micrococcus sp. 28]
Length = 406
Score = 33.1 bits (74), Expect(2) = 0.015
Identities = 21/46 (45%), Positives = 25/46 (53%), Gaps = 4/46 (8%)
Frame = -1
Query: 412 PLAGAASPQ*VCP----AHPSVAC*APPRSPRTRPVPATHAPPAPA 287
P A A SP+ V P A P+V+ APP + RP P APP PA
Sbjct: 264 PFAPAVSPEAVAPAVPLAPPAVSAAAPPPA---RPPPGPAAPPPPA 306
Score = 25.0 bits (53), Expect(2) = 0.015
Identities = 16/45 (35%), Positives = 19/45 (41%)
Frame = -3
Query: 167 PSAAPPWWRRCRGSLGGSRSAPPAPAPGRSA*CPCPAHSAARRRR 33
P+ APP R R+AP PAP P PA + R R
Sbjct: 326 PAPAPPVPARMAAPAAMPRAAPATPAPENP---PRPAPTTGDRNR 367
>sp|P33479|IE18_PRVKA IMMEDIATE-EARLY PROTEIN IE180 gi|418707|pir||A45344 immediate-early
protein - suid herpesvirus 1 (strain Kaplan)
gi|334071|gb|AAA47470.1| immediate-early protein
Length = 1446
Score = 38.9 bits (89), Expect = 0.016
Identities = 40/128 (31%), Positives = 56/128 (43%), Gaps = 6/128 (4%)
Frame = -3
Query: 383 SLSSSSFGCVLSTATQPAYTPCPRDSRAASTCLSTAMRCCGSSLGSSSTVWSFAGMGKFP 204
S SSS LS A P+ PR AA+ +++ SS SSS+ S G
Sbjct: 348 SSSSSGSDSDLSPARSPS---APRAPAAAARRSASSSSSSSSSSSSSSSSSSSEGEEDEG 404
Query: 203 LRISSTVRQHSP------PSAAPPWWRRCRGSLGGSRSAPPAPAPGRSA*CPCPAHSAAR 42
+R + + + P P+AAP R S S +A PAPAP PA R
Sbjct: 405 VRPGAPLARAGPPPSPPAPAAAP---RPSASSASSSAAASPAPAPE-------PARPPRR 454
Query: 41 RRRTASHH 18
+RR+ ++H
Sbjct: 455 KRRSTNNH 462
>dbj|BAC86140.1| unnamed protein product [Homo sapiens]
Length = 277
Score = 38.9 bits (89), Expect = 0.016
Identities = 35/128 (27%), Positives = 51/128 (39%), Gaps = 11/128 (8%)
Frame = -3
Query: 425 TMMLAARWGSESAISLSSSSFGCVLSTATQPAYT-PCPRDSRAASTCLSTAMRCCGSSLG 249
T L + G A SS++ C +T P T PC + A S +R +S G
Sbjct: 128 TRSLESCGGCSGATHSSSTASRCTARCSTPPRTTAPCASGTCAGSEVPRGPLRPRAASRG 187
Query: 248 SSSTVWSF----------AGMGKFPLRISSTVRQHSPPSAAPPWWRRCRGSLGGSRSAPP 99
SS+T W+ AG + P + S S P P WWR G G+R
Sbjct: 188 SSATRWAAPPRPCSRPDPAGPLQTPAQTPSG--SQSAPPCYPRWWRPMAGEGRGARKPGR 245
Query: 98 APAPGRSA 75
+P +++
Sbjct: 246 EESPSQAS 253
>emb|CAE04658.1| OSJNBa0061G20.14 [Oryza sativa (japonica cultivar-group)]
Length = 540
Score = 29.3 bits (64), Expect(2) = 0.019
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = -1
Query: 400 AASPQ*VCPAHPSVAC*APPRSPRTRPVPATHAPPAP 290
AAS PA PS +PP P P P+ APP P
Sbjct: 142 AASRAPSLPAPPSPPAPSPPVPPPRPPAPSPPAPPPP 178
Score = 28.5 bits (62), Expect(2) = 0.019
Identities = 20/55 (36%), Positives = 21/55 (37%)
Frame = -3
Query: 173 SPPSAAPPWWRRCRGSLGGSRSAPPAPAPGRSA*CPCPAHSAARRRRTASHHTRT 9
SPP+ PP S APPAP P PCP R R A RT
Sbjct: 171 SPPAPPPP-------PPAPSPPAPPAPPPPPPPPPPCPPAPPKTRSRQAPPLART 218
>dbj|BAC55974.1| similar to polyprotein [Oryza sativa (japonica cultivar-group)]
Length = 848
Score = 37.7 bits (86), Expect = 0.036
Identities = 25/56 (44%), Positives = 31/56 (54%)
Frame = -3
Query: 173 SPPSAAPPWWRRCRGSLGGSRSAPPAPAPGRSA*CPCPAHSAARRRRTASHHTRTG 6
SPPSA P CR L + +PP P+P RS+ CP+ SAA RR SH + G
Sbjct: 724 SPPSA-PRRQAPCRPRLAFVQGSPPKPSPRRSSPL-CPSVSAAPVRRCRSHASSRG 777
