KCC003464A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003464A_C01 KCC003464A_c01
CTCGGGGTGGCGGGACCCTCCGCGAGCGAGCCCGAGCGCGCTGCGTCGGCATCGGTCGCA
ACCAACTCGTCGGGTAGCTGCGCTTCGGGGCTCTTCCGCCTCCTACGGCTCCGCAGCAGC
AGCAGCGGCTTACGCACATCCACTAATGGGCCTATACGCCGCGCTGTCGCAGCAGCAGCA
ACAAGCGGCCGCTTACGGAGCCAGCCCGGCAAACAGCTATGGCGCGATGGCGCCTTTCAC
GACGCACCTCCACCCCGCGTACTACGCCCGGCCCCAGGACGCCGGTCAGGCA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003464A_C01 KCC003464A_c01
         (292 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAA19104.1| bZIP protein                                            40  0.007
pir||S50821 DNA-Binding protein - wheat gi|469056|gb|AAA17488.1|...    40  0.007
gb|AAD33693.1|AF136600_1 protein kinase C [Magnaporthe grisea]         39  0.020
ref|XP_322751.1| hypothetical protein [Neurospora crassa] gi|289...    37  0.059
gb|AAB48349.1| glycine rich protein                                    37  0.059

>gb|AAA19104.1| bZIP protein
          Length = 263

 Score = 40.4 bits (93), Expect = 0.007
 Identities = 31/73 (42%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
 Frame = +2

Query: 62  PTRRVAALRGSSASYGSAAAAAAYAHPLMGLYAA--LSQQQQQAAAYGASPANSYGAMAP 235
           P +  A    S  +Y +AAA+AA  HP    YAA  L  Q QQ     A P  +YGA  P
Sbjct: 23  PAQAHAEWAASMHAYYAAAASAA-GHP----YAAWPLPPQAQQHGLVAAGPGAAYGAPVP 77

Query: 236 FTTHLHP--AYYA 268
           F  + HP  AYYA
Sbjct: 78  FPMYHHPAAAYYA 90

>pir||S50821 DNA-Binding protein - wheat gi|469056|gb|AAA17488.1| DNA-Binding
           protein
          Length = 357

 Score = 40.4 bits (93), Expect = 0.007
 Identities = 31/73 (42%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
 Frame = +2

Query: 62  PTRRVAALRGSSASYGSAAAAAAYAHPLMGLYAA--LSQQQQQAAAYGASPANSYGAMAP 235
           P +  A    S  +Y +AAA+AA  HP    YAA  L  Q QQ     A P  +YGA  P
Sbjct: 23  PAQAHAEWAASMHAYYAAAASAA-GHP----YAAWPLPPQAQQHGLVAAGPGAAYGAPVP 77

Query: 236 FTTHLHP--AYYA 268
           F  + HP  AYYA
Sbjct: 78  FPMYHHPAAAYYA 90

>gb|AAD33693.1|AF136600_1 protein kinase C [Magnaporthe grisea]
          Length = 1182

 Score = 38.9 bits (89), Expect = 0.020
 Identities = 33/95 (34%), Positives = 46/95 (47%), Gaps = 7/95 (7%)
 Frame = +2

Query: 20  PRASPSALRRHRSQ--PTRRVAALRGSSASYGSAAAAAAYAHPLMGLYAALSQQ-----Q 178
           P A+ +A   + SQ  P R  +  R SS+S  +AAA AA    + GL  A+S Q     Q
Sbjct: 660 PEATEAAKFMYSSQTSPQRITSPDRTSSSSQAAAAATAA----MTGLPGAMSSQPGRQGQ 715

Query: 179 QQAAAYGASPANSYGAMAPFTTHLHPAYYARPQDA 283
           Q    YG++    YG+  P     H   YA+PQ +
Sbjct: 716 QPITDYGSASGGRYGSYGP-----HDDPYAQPQQS 745

>ref|XP_322751.1| hypothetical protein [Neurospora crassa] gi|28916906|gb|EAA26644.1|
           hypothetical protein [Neurospora crassa]
          Length = 961

 Score = 37.4 bits (85), Expect = 0.059
 Identities = 30/97 (30%), Positives = 39/97 (39%), Gaps = 12/97 (12%)
 Frame = +2

Query: 35  SALRRHRSQPTRRVAALRGSSASYGS----------AAAAAAYAHPLMGLYAALSQQQQQ 184
           SA  RH S PT R    R SS+ YGS          A A+  Y H     Y   S     
Sbjct: 682 SADPRHASPPTDRYYGSRPSSSGYGSSVHGSGRPSPAPASFGYHHGGHQAYEGSSSSYPS 741

Query: 185 AAAYGASPANSYGAMA--PFTTHLHPAYYARPQDAGQ 289
             +YG S   SYG  +   +     P+Y ++P  + Q
Sbjct: 742 QPSYGGSSGPSYGGSSGPSYGGFSQPSYGSQPSYSSQ 778

>gb|AAB48349.1| glycine rich protein
          Length = 966

 Score = 37.4 bits (85), Expect = 0.059
 Identities = 30/97 (30%), Positives = 39/97 (39%), Gaps = 12/97 (12%)
 Frame = +2

Query: 35  SALRRHRSQPTRRVAALRGSSASYGS----------AAAAAAYAHPLMGLYAALSQQQQQ 184
           SA  RH S PT R    R SS+ YGS          A A+  Y H     Y   S     
Sbjct: 687 SADPRHASPPTDRYYGSRPSSSGYGSSVHGSGRPSPAPASFGYHHGGHQAYEGSSSSYPS 746

Query: 185 AAAYGASPANSYGAMA--PFTTHLHPAYYARPQDAGQ 289
             +YG S   SYG  +   +     P+Y ++P  + Q
Sbjct: 747 QPSYGGSSGPSYGGSSGPSYGGFSQPSYGSQPSYSSQ 783



EST assemble image


clone accession position
1 MXL034h05_r BP095041 1 355
2 MXL088a05_r BP098139 35 360




Chlamydomonas reinhardtii
Kazusa DNA Research Institute