Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003455A_C01 KCC003455A_c01
(477 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_291315.2| similar to KIAA1815 protein [Homo sapiens] 36 0.26
dbj|BAB47444.2| KIAA1815 protein [Homo sapiens] 36 0.26
dbj|BAC10073.1| hypothetical protein [Oryza sativa (japonica cul... 35 0.58
ref|ZP_00033041.1| COG1024: Enoyl-CoA hydratase/carnithine racem... 35 0.58
sp|P29331|MYOD_SHEEP Myoblast determination protein 1 gi|109059|... 28 0.60
>ref|XP_291315.2| similar to KIAA1815 protein [Homo sapiens]
Length = 904
Score = 35.8 bits (81), Expect = 0.26
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = -1
Query: 420 PGSERRSHPPLQPGLDGGGAGWRRTPGAAGNHRRAARTG 304
P E R+ PL G GGG +R+PG +G R A TG
Sbjct: 29 PEREARAQEPLVDGCSGGGRTRKRSPGGSGGASRGAGTG 67
>dbj|BAB47444.2| KIAA1815 protein [Homo sapiens]
Length = 881
Score = 35.8 bits (81), Expect = 0.26
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = -1
Query: 420 PGSERRSHPPLQPGLDGGGAGWRRTPGAAGNHRRAARTG 304
P E R+ PL G GGG +R+PG +G R A TG
Sbjct: 6 PEREARAQEPLVDGCSGGGRTRKRSPGGSGGASRGAGTG 44
>dbj|BAC10073.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length = 193
Score = 34.7 bits (78), Expect = 0.58
Identities = 21/59 (35%), Positives = 24/59 (40%), Gaps = 3/59 (5%)
Frame = -1
Query: 414 SERRSHPPLQPGLDGGGAGWRRTPGAAGNH---RRAARTGNWLAQSSGPATP*RRSCRW 247
S R S P Q G D WRR G + +R TG W + GP R CRW
Sbjct: 128 SGRESRP--QEGADWRRLQWRRKEGRSERGTVGQRRKTTGGWAGRRGGPGAEGGRQCRW 184
>ref|ZP_00033041.1| COG1024: Enoyl-CoA hydratase/carnithine racemase [Burkholderia
fungorum]
Length = 473
Score = 34.7 bits (78), Expect = 0.58
Identities = 22/44 (50%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Frame = -1
Query: 429 CTRPGSERRSHPPLQPGLDGGGAGW---RRTPGAAGNHRRAART 307
C RP RRS PL LD A W R PGAA +RRA RT
Sbjct: 50 CGRPAGNRRSDRPL---LDRARAVWQVHRLVPGAAAANRRAGRT 90
>sp|P29331|MYOD_SHEEP Myoblast determination protein 1 gi|109059|pir||S20086 MyoD1
protein - sheep gi|1348|emb|CAA44012.1| MyoD1 [Ovis
aries]
Length = 319
Score = 28.5 bits (62), Expect(2) = 0.60
Identities = 12/18 (66%), Positives = 13/18 (71%)
Frame = +2
Query: 332 PAAPGVLLHPAPPPSKPG 385
PAAP +LL APP S PG
Sbjct: 264 PAAPALLLADAPPESSPG 281
Score = 25.0 bits (53), Expect(2) = 0.60
Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +1
Query: 205 ADLSSDEKECSC-LLPAAGPPSGCRR 279
+D SS CS ++ +GPPSG RR
Sbjct: 197 SDASSPRSNCSDGMMDYSGPPSGARR 222
