KCC003450A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003450A_C01 KCC003450A_c01
aaccgtgtccttgtagccttttcttccttgctcggagcaaagccaggtcgcagaactcag
actccctcgaaactcatgcgCATGCAATAGCTTATCCATTCTAAGAACCAGCAGACCTAG
ACATGTCGAGCACAGCCAGCCCTTTCACGGGCTGTGGGCGCGAAGCCGGGGTGAAAGTCT
GGCGTGTGAAGGACTTCAACCTGGTGGAGGAGAAGGATGTTGGCTCCTTTTATTCTGGCG
ATTGCTACCTTATCCTTGACACCTTCAAAACCGAAAGCGGTCTGCGGCACCACGTTCATT
TCTGGCTTGGCAAGGACACCACTGCGGATGAGTCGGGGAGCGTTGCCATCTTTGCGGCGC
AGCTGGACGACTCGCTGGGCGGCGGCCCGGTGCAGTTCCGA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003450A_C01 KCC003450A_c01
         (401 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

sp|P10733|SEVE_DICDI Severin gi|84142|pir||A28517 severin - slim...   100  5e-21
gb|AAD15423.1| similar to mouse adseverin(D5); similar to PID:g2...    94  5e-19
gb|AAK60494.1| scinderin [Homo sapiens]                                94  5e-19
dbj|BAB67798.1| KIAA1905 protein [Homo sapiens]                        94  5e-19
dbj|BAC11416.1| unnamed protein product [Homo sapiens]                 93  8e-19

>sp|P10733|SEVE_DICDI Severin gi|84142|pir||A28517 severin - slime mold (Dictyostelium
           discoideum) gi|167879|gb|AAA33250.1| severin
          Length = 362

 Score =  100 bits (249), Expect = 5e-21
 Identities = 48/121 (39%), Positives = 73/121 (59%), Gaps = 2/121 (1%)
 Frame = +3

Query: 45  RSQNSDSLETHAHAIAYPF*EPADLDMSSTASPFTGCGREAGVKVWRVKDFNLVE--EKD 218
           +++  D   T+   I     +   LD +ST + + G G+  G+K+WR+++F +V   E  
Sbjct: 3   KNRKLDITSTNVAGIGTDLDKKCRLDAASTEAQWKGVGQAPGLKIWRIENFKVVPVPESS 62

Query: 219 VGSFYSGDCYLILDTFKTESGLRHHVHFWLGKDTTADESGSVAIFAAQLDDSLGGGPVQF 398
            G FY GD Y+IL TFK  + L+H +HF+LG  TT DE+G+ A    +LDD LGG P+Q+
Sbjct: 63  YGKFYDGDSYIILHTFKEGNSLKHDIHFFLGTFTTQDEAGTAAYKTVELDDFLGGAPIQY 122

Query: 399 R 401
           R
Sbjct: 123 R 123

>gb|AAD15423.1| similar to mouse adseverin(D5); similar to PID:g2218019 [Homo
           sapiens]
          Length = 527

 Score = 94.0 bits (232), Expect = 5e-19
 Identities = 44/88 (50%), Positives = 58/88 (65%), Gaps = 2/88 (2%)
 Frame = +3

Query: 144 FTGCGREAGVKVWRVKDFNLVE--EKDVGSFYSGDCYLILDTFKTESGLRHHVHFWLGKD 317
           F   G++AG++VWR++   LV   +   G FY GD YL+L T KT  G  +H+HFWLGK+
Sbjct: 10  FARAGKQAGLQVWRIEKLELVPVPQSAHGDFYVGDAYLVLHTAKTSRGFTYHLHFWLGKE 69

Query: 318 TTADESGSVAIFAAQLDDSLGGGPVQFR 401
            + DES + AIF  Q+DD LGG PVQ R
Sbjct: 70  CSQDESTAAAIFTVQMDDYLGGKPVQNR 97

 Score = 56.6 bits (135), Expect = 8e-08
 Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
 Frame = +3

Query: 171 VKVWRVKDFNL--VEEKDVGSFYSGDCYLILDTFKTESGLRHHVHFWLGKDTTADESGSV 344
           V++WRV++     V++   G FY GDCY+IL T+         ++ W G + T DE  + 
Sbjct: 398 VEIWRVENNGRIQVDQNSYGEFYGGDCYIILYTYPRGQ----IIYTWQGANATRDELTTS 453

Query: 345 AIFAAQLDDSLGGGPVQFR 401
           A    QLD SLGG  VQ R
Sbjct: 454 AFLTVQLDRSLGGQAVQIR 472

>gb|AAK60494.1| scinderin [Homo sapiens]
          Length = 715

 Score = 94.0 bits (232), Expect = 5e-19
 Identities = 44/88 (50%), Positives = 58/88 (65%), Gaps = 2/88 (2%)
 Frame = +3

Query: 144 FTGCGREAGVKVWRVKDFNLVE--EKDVGSFYSGDCYLILDTFKTESGLRHHVHFWLGKD 317
           F   G++AG++VWR++   LV   +   G FY GD YL+L T KT  G  +H+HFWLGK+
Sbjct: 10  FARAGKQAGLQVWRIEKLELVPVPQSAHGDFYVGDAYLVLHTAKTSRGFTYHLHFWLGKE 69

Query: 318 TTADESGSVAIFAAQLDDSLGGGPVQFR 401
            + DES + AIF  Q+DD LGG PVQ R
Sbjct: 70  CSQDESTAAAIFTVQMDDYLGGKPVQNR 97

 Score = 56.6 bits (135), Expect = 8e-08
 Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
 Frame = +3

Query: 171 VKVWRVKDFNL--VEEKDVGSFYSGDCYLILDTFKTESGLRHHVHFWLGKDTTADESGSV 344
           V++WRV++     V++   G FY GDCY+IL T+         ++ W G + T DE  + 
Sbjct: 398 VEIWRVENNGRIQVDQNSYGEFYGGDCYIILYTYPRGQ----IIYTWQGANATRDELTTS 453

Query: 345 AIFAAQLDDSLGGGPVQFR 401
           A    QLD SLGG  VQ R
Sbjct: 454 AFLTVQLDRSLGGQAVQIR 472

>dbj|BAB67798.1| KIAA1905 protein [Homo sapiens]
          Length = 626

 Score = 94.0 bits (232), Expect = 5e-19
 Identities = 44/88 (50%), Positives = 58/88 (65%), Gaps = 2/88 (2%)
 Frame = +3

Query: 144 FTGCGREAGVKVWRVKDFNLVE--EKDVGSFYSGDCYLILDTFKTESGLRHHVHFWLGKD 317
           F   G++AG++VWR++   LV   +   G FY GD YL+L T KT  G  +H+HFWLGK+
Sbjct: 56  FARAGKQAGLQVWRIEKLELVPVPQSAHGDFYVGDAYLVLHTAKTSRGFTYHLHFWLGKE 115

Query: 318 TTADESGSVAIFAAQLDDSLGGGPVQFR 401
            + DES + AIF  Q+DD LGG PVQ R
Sbjct: 116 CSQDESTAAAIFTVQMDDYLGGKPVQNR 143

 Score = 56.6 bits (135), Expect = 8e-08
 Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
 Frame = +3

Query: 171 VKVWRVKDFNL--VEEKDVGSFYSGDCYLILDTFKTESGLRHHVHFWLGKDTTADESGSV 344
           V++WRV++     V++   G FY GDCY+IL T+         ++ W G + T DE  + 
Sbjct: 444 VEIWRVENNGRIQVDQNSYGEFYGGDCYIILYTYPRGQ----IIYTWQGANATRDELTTS 499

Query: 345 AIFAAQLDDSLGGGPVQFR 401
           A    QLD SLGG  VQ R
Sbjct: 500 AFLTVQLDRSLGGQAVQIR 518

>dbj|BAC11416.1| unnamed protein product [Homo sapiens]
          Length = 715

 Score = 93.2 bits (230), Expect = 8e-19
 Identities = 44/88 (50%), Positives = 58/88 (65%), Gaps = 2/88 (2%)
 Frame = +3

Query: 144 FTGCGREAGVKVWRVKDFNLVE--EKDVGSFYSGDCYLILDTFKTESGLRHHVHFWLGKD 317
           F   G++AG++VWR++   LV   +   G FY GD YL+L T KT  G  +H+HFWLGK+
Sbjct: 10  FARAGKQAGLQVWRIEKLELVPVPQSAHGDFYVGDAYLMLHTAKTSRGFTYHLHFWLGKE 69

Query: 318 TTADESGSVAIFAAQLDDSLGGGPVQFR 401
            + DES + AIF  Q+DD LGG PVQ R
Sbjct: 70  CSQDESTAAAIFTVQMDDYLGGKPVQNR 97

 Score = 56.6 bits (135), Expect = 8e-08
 Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
 Frame = +3

Query: 171 VKVWRVKDFNL--VEEKDVGSFYSGDCYLILDTFKTESGLRHHVHFWLGKDTTADESGSV 344
           V++WRV++     V++   G FY GDCY+IL T+         ++ W G + T DE  + 
Sbjct: 398 VEIWRVENNGRIQVDQNSYGEFYGGDCYIILYTYPRGQ----IIYTWQGANATRDELTTS 453

Query: 345 AIFAAQLDDSLGGGPVQFR 401
           A    QLD SLGG  VQ R
Sbjct: 454 AFLTVQLDRSLGGQAVQIR 472



EST assemble image


clone accession position
1 MXL060f07_r BP096554 1 401
2 MXL021d06_r BP094333 125 358




Chlamydomonas reinhardtii
Kazusa DNA Research Institute