KCC003447A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003447A_C01 KCC003447A_c01
gcaagatcgagctgtacacggccgccgcgggcgtgaatcccgccgtgtgtctgccggtgt
gcctggacgtgggcaccaacAACACCCAGCTGCGCGAGCACCCCGTCTACGCCGGTGTTG
CGGGCGCCGCGCCCCATCCGGCAACAGGTGTACGACGAGTTCGTGCAGGAGTTCATGGAG
GCTGTCAAGATCTGGCAGCCGCACACGCTGATCCAGTTTGAGGACTTCGGAAACAACAAC
GCGTTCAGGATCCTGGACAAGTACAAGGATGACTACTGCTGCTTCAACGACGACATCCAG
GGCACTGCCGCCATCACTCTGGCGGCGCTGCTGGCGGCACTGCGTGTGACGGGCCAGTGC
CTTGGCGGACCAGCGCATCCTGTTCATGGGCGCGGGTGAGGCGGCCACGGGAATCGCGTC
CCTCATCTCCTTCTGCATCCACCGGAGAGACGGCGTCAGCGAGCAGGCCGCCCGCCAGCG
CTGCCACCTGATGGACAGCAAGGGCCTGGTGCTCGCCAGCCGCACCGACCTGCAGCACCA
CAAGCGGCCCTTCGCGCACAGCGACGTGCCGCCCTGCGCCACGCTGATCGAGGCGGTGCG
CGCCATCAAGCCCACTGCCATCGTTGGCGTGAGCGCGGTGGCGGATGCCTTCACGCCGGA
GGTGCTGGCGGCGATGGCGGAGCTAAACGACCGCCCCATCATCTTCCCGCTGTCCAACCC
CACCTCCCTGGCTGAGTGCACCTTTGAGCAGGCGTACCGCGCCACGAACGGCCGCGTGCT
CTTCGCCAGCGGCTCGCCATTCGACCCGATTGTTGACGAGCGCGGCATTGCGCACCACCC
GCCCCAGGCCAACAACGCCTACATCTTCCCGGCCGTGGGCCACGCCGCCGTGCTCACCAA
GTCCAAGCGCGTGCCCGAGGAGGTGTTCCTGGTGGCGGCGGAGCGGCTGTCCGTCATGGC
CACGGCCGCGGAGCTGCAGGTGGGGGCGCTGTTCCCGCCCTTTGCCCGCATCCGCGACAT
CAGCGCCCACG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003447A_C01 KCC003447A_c01
         (1031 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|XP_310951.1| ENSANGP00000019421 [Anopheles gambiae] gi|30178...   218  1e-86
ref|NP_773109.1| malic enzyme [Bradyrhizobium japonicum] gi|2735...   209  3e-82
ref|NP_651959.1| CG5889-PA [Drosophila melanogaster] gi|7301553|...   183  4e-77
emb|CAB64263.1| malate dehydrogenase (NADP-dependent oxaloacetat...   183  4e-77
ref|NP_663469.1| malic enzyme 2, NAD(+)-dependent, mitochondrial...   188  4e-76

>ref|XP_310951.1| ENSANGP00000019421 [Anopheles gambiae] gi|30178024|gb|EAA06403.2|
            ENSANGP00000019421 [Anopheles gambiae str. PEST]
          Length = 676

 Score =  218 bits (554), Expect(3) = 1e-86
 Identities = 116/224 (51%), Positives = 154/224 (67%), Gaps = 3/224 (1%)
 Frame = +2

Query: 362  LADQRILFMGAGEAATGIASLISFCIHRRDGVSEQAARQRCHLMDSKGLVLASRTD--LQ 535
            LAD R+LF GAGEAA GIA L    + +RDG++E+ ARQR  L+DSKGL++  R    + 
Sbjct: 405  LADNRVLFQGAGEAALGIAQLCVMAM-KRDGLTEEEARQRIWLVDSKGLIVKDRPTGGIS 463

Query: 536  HHKRPFAHSDVPPCATLIEAVRAIKPTAIVGVSAVADAFTPEVLAAMAELNDRPIIFPLS 715
             HK  FAH   P   TL+EAVR +KPT ++G +A+A AFTPEVL  MA  N+RP+IF LS
Sbjct: 464  GHKHLFAHEHAP-VGTLLEAVRELKPTILIGAAAIAGAFTPEVLRTMAANNERPVIFALS 522

Query: 716  NPTSLAECTFEQAYRATNGRVLFASGSPFDPI-VDERGIAHHPPQANNAYIFPAVGHAAV 892
            NPTS AECT EQAY  T+GR +FASGSPF P+ + +R    HP Q NN+YIFP V    +
Sbjct: 523  NPTSKAECTAEQAYEHTDGRAVFASGSPFAPVTLGDR--TFHPGQGNNSYIFPGVALGVL 580

Query: 893  LTKSKRVPEEVFLVAAERLSVMATAAELQVGALFPPFARIRDIS 1024
               +  +PEE+FL++A+RL+ + T  +L+ G+L+PP   I+D S
Sbjct: 581  CAGASTIPEEIFLLSAQRLAEIVTDDDLERGSLYPPLENIKDCS 624

 Score = 96.7 bits (239), Expect(3) = 1e-86
 Identities = 47/75 (62%), Positives = 59/75 (78%), Gaps = 1/75 (1%)
 Frame = +1

Query: 130 RPIRQQVYDEFVQEFMEA-VKIWQPHTLIQFEDFGNNNAFRILDKYKDDYCCFNDDIQGT 306
           R +    YDEFVQEFMEA V+ +  + LIQFEDF N+NAFR LD+Y+ DYC FNDDIQGT
Sbjct: 327 RRVTGPAYDEFVQEFMEAAVRRFGRNCLIQFEDFANSNAFRFLDQYRHDYCTFNDDIQGT 386

Query: 307 AAITLAALLAALRVT 351
           A++ +A LLA+LR+T
Sbjct: 387 ASVAVAGLLASLRIT 401

 Score = 50.8 bits (120), Expect(3) = 1e-86
 Identities = 21/39 (53%), Positives = 28/39 (70%)
 Frame = +3

Query: 3   KIELYTAAAGVNPAVCLPVCLDVGTNNTQLREHPVYAGV 119
           K+ LYTA AG+ P+ CLPV LDVGTN   + + P+Y G+
Sbjct: 286 KLALYTALAGIKPSQCLPVTLDVGTNTQSILDDPLYVGL 324

>ref|NP_773109.1| malic enzyme [Bradyrhizobium japonicum] gi|27354748|dbj|BAC51734.1|
            malic enzyme [Bradyrhizobium japonicum USDA 110]
          Length = 531

 Score =  209 bits (533), Expect(3) = 3e-82
 Identities = 111/222 (50%), Positives = 149/222 (67%)
 Frame = +2

Query: 362  LADQRILFMGAGEAATGIASLISFCIHRRDGVSEQAARQRCHLMDSKGLVLASRTDLQHH 541
            L DQ+ILF+GAGEAATGIA L+   +   +G +E  A +R  L+DS+GLV++ R  L  H
Sbjct: 275  LKDQKILFLGAGEAATGIADLVVSAM-MAEGATEAEALRRNWLVDSRGLVVSGRDGLSGH 333

Query: 542  KRPFAHSDVPPCATLIEAVRAIKPTAIVGVSAVADAFTPEVLAAMAELNDRPIIFPLSNP 721
            K  +AH+   P +  + A++ +KPTAI+GV+AV  AFTP+VL AMA LN+ PI+F LSNP
Sbjct: 334  KLRYAHAGQAPISDFLTAIKTLKPTAIIGVAAVGGAFTPDVLKAMAGLNEHPIVFALSNP 393

Query: 722  TSLAECTFEQAYRATNGRVLFASGSPFDPIVDERGIAHHPPQANNAYIFPAVGHAAVLTK 901
            TS AEC+ E AYR T GR LFA GSP+DP V   G    P Q NN+YIFP VG   + T+
Sbjct: 394  TSKAECSAEDAYRYTEGRALFACGSPYDP-VKLNGRTFVPRQGNNSYIFPGVGLGVIATR 452

Query: 902  SKRVPEEVFLVAAERLSVMATAAELQVGALFPPFARIRDISA 1027
            S+ V +E+F+ AA  L+      +L  G+L+P   RIR++SA
Sbjct: 453  SRLVTDEMFMAAAHSLADCVGKEDLAQGSLYPALPRIREVSA 494

 Score = 89.4 bits (220), Expect(3) = 3e-82
 Identities = 41/75 (54%), Positives = 54/75 (71%)
 Frame = +1

Query: 130 RPIRQQVYDEFVQEFMEAVKIWQPHTLIQFEDFGNNNAFRILDKYKDDYCCFNDDIQGTA 309
           R +  + YD FV EFM A +   P  LIQFEDF N++AF++L KY+D+ C FNDDIQGTA
Sbjct: 198 RRLTGEAYDSFVDEFMVAARKTFPGVLIQFEDFANHSAFKLLHKYRDEACVFNDDIQGTA 257

Query: 310 AITLAALLAALRVTG 354
           A+ LA L + LR++G
Sbjct: 258 AVALAGLFSGLRISG 272

 Score = 51.2 bits (121), Expect(3) = 3e-82
 Identities = 22/39 (56%), Positives = 28/39 (71%)
 Frame = +3

Query: 3   KIELYTAAAGVNPAVCLPVCLDVGTNNTQLREHPVYAGV 119
           K+ LY+A AGV+P  CLP+ LDVGTNN +L   P Y G+
Sbjct: 157 KLSLYSACAGVHPEHCLPIVLDVGTNNEELLNDPYYLGL 195

>ref|NP_651959.1| CG5889-PA [Drosophila melanogaster] gi|7301553|gb|AAF56674.1|
            CG5889-PA [Drosophila melanogaster]
            gi|15291241|gb|AAK92889.1| GH13437p [Drosophila
            melanogaster]
          Length = 617

 Score =  183 bits (465), Expect(3) = 4e-77
 Identities = 99/222 (44%), Positives = 144/222 (64%), Gaps = 3/222 (1%)
 Frame = +2

Query: 368  DQRILFMGAGEAATGIASLISFCIHRRDGVSEQAARQRCHLMDSKGLVLASRT--DLQHH 541
            D   LF GAGEAA GIA L    + + DGV  + A  R +++D  GL+  SR   +L  H
Sbjct: 332  DYTFLFAGAGEAAIGIADLTVKAMVQ-DGVPIEEAYNRIYMVDIDGLLTKSRKVGNLDGH 390

Query: 542  KRPFAHSDVPPCATLIEAVRAIKPTAIVGVSAVADAFTPEVLAAMAELNDRPIIFPLSNP 721
            K  +A  D+ P + L E V  IKP+ ++G SA A  FTPE+L  MA+ N+RP++F LSNP
Sbjct: 391  KIHYA-KDINPMSDLAEIVSTIKPSVLIGASAAAGIFTPEILRTMADNNERPVVFALSNP 449

Query: 722  TSLAECTFEQAYRATNGRVLFASGSPFDPI-VDERGIAHHPPQANNAYIFPAVGHAAVLT 898
            TS AECT E AY+ T+ RV+F+SGSPF P+ + ++    +P Q NNAYIFP VG   + T
Sbjct: 450  TSKAECTAEDAYKHTDARVIFSSGSPFPPVQIGDK--TFYPGQGNNAYIFPGVGLGVICT 507

Query: 899  KSKRVPEEVFLVAAERLSVMATAAELQVGALFPPFARIRDIS 1024
             +  +P+E+FL+AA+ L+     ++++ G+L+PP + IR++S
Sbjct: 508  GTHHIPDEMFLIAAQELANFVEPSDIERGSLYPPLSSIRNVS 549

 Score = 97.4 bits (241), Expect(3) = 4e-77
 Identities = 48/81 (59%), Positives = 64/81 (78%), Gaps = 1/81 (1%)
 Frame = +1

Query: 118 LRAPRPIRQQVYDEFVQEFMEAV-KIWQPHTLIQFEDFGNNNAFRILDKYKDDYCCFNDD 294
           LR  R + ++ YDEF+ EFMEAV + +  +TLIQFEDFGN+NAFR LDKY++ YC FNDD
Sbjct: 249 LRQKRVVGRE-YDEFIDEFMEAVVQRYGQNTLIQFEDFGNHNAFRFLDKYRNTYCTFNDD 307

Query: 295 IQGTAAITLAALLAALRVTGQ 357
           IQGTA++ +A L A+ R+TG+
Sbjct: 308 IQGTASVAVAGLYASKRITGK 328

 Score = 52.4 bits (124), Expect(3) = 4e-77
 Identities = 22/39 (56%), Positives = 28/39 (71%)
 Frame = +3

Query: 3   KIELYTAAAGVNPAVCLPVCLDVGTNNTQLREHPVYAGV 119
           K+ LYTA AG+ P  CLP+ +DVGTNN  L E P+Y G+
Sbjct: 211 KLALYTALAGIKPHQCLPIVVDVGTNNIDLLEDPLYVGL 249

>emb|CAB64263.1| malate dehydrogenase (NADP-dependent oxaloacetate decarboxylating),
            malic enzyme [Drosophila melanogaster]
          Length = 604

 Score =  183 bits (465), Expect(3) = 4e-77
 Identities = 99/222 (44%), Positives = 144/222 (64%), Gaps = 3/222 (1%)
 Frame = +2

Query: 368  DQRILFMGAGEAATGIASLISFCIHRRDGVSEQAARQRCHLMDSKGLVLASRT--DLQHH 541
            D   LF GAGEAA GIA L    + + DGV  + A  R +++D  GL+  SR   +L  H
Sbjct: 332  DYTFLFAGAGEAAIGIADLTVKAMVQ-DGVPIEEAYNRIYMVDIDGLLTKSRKVGNLDGH 390

Query: 542  KRPFAHSDVPPCATLIEAVRAIKPTAIVGVSAVADAFTPEVLAAMAELNDRPIIFPLSNP 721
            K  +A  D+ P + L E V  IKP+ ++G SA A  FTPE+L  MA+ N+RP++F LSNP
Sbjct: 391  KIHYA-KDINPMSDLAEIVSTIKPSVLIGASAAAGIFTPEILRTMADNNERPVVFALSNP 449

Query: 722  TSLAECTFEQAYRATNGRVLFASGSPFDPI-VDERGIAHHPPQANNAYIFPAVGHAAVLT 898
            TS AECT E AY+ T+ RV+F+SGSPF P+ + ++    +P Q NNAYIFP VG   + T
Sbjct: 450  TSKAECTAEDAYKHTDARVIFSSGSPFPPVQIGDK--TFYPGQGNNAYIFPGVGLGVICT 507

Query: 899  KSKRVPEEVFLVAAERLSVMATAAELQVGALFPPFARIRDIS 1024
             +  +P+E+FL+AA+ L+     ++++ G+L+PP + IR++S
Sbjct: 508  GTHHIPDEMFLIAAQELANFVEPSDIERGSLYPPLSSIRNVS 549

 Score = 97.4 bits (241), Expect(3) = 4e-77
 Identities = 48/81 (59%), Positives = 64/81 (78%), Gaps = 1/81 (1%)
 Frame = +1

Query: 118 LRAPRPIRQQVYDEFVQEFMEAV-KIWQPHTLIQFEDFGNNNAFRILDKYKDDYCCFNDD 294
           LR  R + ++ YDEF+ EFMEAV + +  +TLIQFEDFGN+NAFR LDKY++ YC FNDD
Sbjct: 249 LRQKRVVGRE-YDEFIDEFMEAVVQRYGQNTLIQFEDFGNHNAFRFLDKYRNTYCTFNDD 307

Query: 295 IQGTAAITLAALLAALRVTGQ 357
           IQGTA++ +A L A+ R+TG+
Sbjct: 308 IQGTASVAVAGLYASKRITGK 328

 Score = 52.4 bits (124), Expect(3) = 4e-77
 Identities = 22/39 (56%), Positives = 28/39 (71%)
 Frame = +3

Query: 3   KIELYTAAAGVNPAVCLPVCLDVGTNNTQLREHPVYAGV 119
           K+ LYTA AG+ P  CLP+ +DVGTNN  L E P+Y G+
Sbjct: 211 KLALYTALAGIKPHQCLPIVVDVGTNNIDLLEDPLYVGL 249

>ref|NP_663469.1| malic enzyme 2, NAD(+)-dependent, mitochondrial [Mus musculus]
            gi|13435684|gb|AAH04709.1| Malic enzyme 2,
            NAD(+)-dependent, mitochondrial [Mus musculus]
            gi|26335031|dbj|BAC31216.1| unnamed protein product [Mus
            musculus] gi|26341610|dbj|BAC34467.1| unnamed protein
            product [Mus musculus] gi|26341642|dbj|BAC34483.1|
            unnamed protein product [Mus musculus]
          Length = 589

 Score =  188 bits (478), Expect(3) = 4e-76
 Identities = 102/227 (44%), Positives = 148/227 (64%), Gaps = 4/227 (1%)
 Frame = +2

Query: 362  LADQRILFMGAGEAATGIASLISFCIHRRDGVSEQAARQRCHLMDSKGLVLASRT-DLQH 538
            +++ +ILF+GAGEAA GIA+LI   +    G+SE+ A+++  + D  GL++  RT  +  
Sbjct: 302  VSEHKILFLGAGEAALGIANLIVLSMVE-SGLSEEEAQRKIWMFDKSGLLVKGRTASIDS 360

Query: 539  HKRPFAHS---DVPPCATLIEAVRAIKPTAIVGVSAVADAFTPEVLAAMAELNDRPIIFP 709
            ++ P+AH+    +P  AT  +AV  +KP+ I+GV+     FT  V+ AMA +N+RPIIF 
Sbjct: 361  NQEPYAHAAPESIP--ATFEDAVNKLKPSVIIGVAGAGPLFTHGVIKAMASINERPIIFA 418

Query: 710  LSNPTSLAECTFEQAYRATNGRVLFASGSPFDPIVDERGIAHHPPQANNAYIFPAVGHAA 889
            LSNPT+ AECT E AY  T GR LFASGSPF+P+  + G    P Q NNAYIFP V  A 
Sbjct: 419  LSNPTAQAECTAEDAYTLTEGRCLFASGSPFEPVKLQDGRVFTPGQGNNAYIFPGVALAV 478

Query: 890  VLTKSKRVPEEVFLVAAERLSVMATAAELQVGALFPPFARIRDISAH 1030
            +L +++ + + VFL AA+ L+   T AEL  G L+P  A I+++SA+
Sbjct: 479  ILCEARHISDTVFLEAAKALTTQLTDAELAQGRLYPSLANIQEVSAN 525

 Score = 89.7 bits (221), Expect(3) = 4e-76
 Identities = 44/71 (61%), Positives = 55/71 (76%), Gaps = 1/71 (1%)
 Frame = +1

Query: 139 RQQVYDEFVQEFMEAVKI-WQPHTLIQFEDFGNNNAFRILDKYKDDYCCFNDDIQGTAAI 315
           R Q+YD+ + EFM+A+   +  +TLIQFEDFGN+NAFR L KY+  YC FNDDIQGTAA+
Sbjct: 227 RSQLYDDLMDEFMKAITDRYGRNTLIQFEDFGNHNAFRFLRKYQQKYCTFNDDIQGTAAV 286

Query: 316 TLAALLAALRV 348
            L+ LLAA RV
Sbjct: 287 ALSGLLAAQRV 297

 Score = 51.6 bits (122), Expect(3) = 4e-76
 Identities = 22/39 (56%), Positives = 28/39 (71%)
 Frame = +3

Query: 3   KIELYTAAAGVNPAVCLPVCLDVGTNNTQLREHPVYAGV 119
           K+ LYTA AG+ P  CLPVC+DVGT+N  L + P Y G+
Sbjct: 183 KLCLYTACAGIQPEKCLPVCIDVGTDNMALLKDPFYMGL 221



EST assemble image


clone accession position
1 MX241a12_r BP091565 1 400
2 MXL082d07_r BP097855 236 686
3 MXL020e12_r BP094286 517 1031




Chlamydomonas reinhardtii
Kazusa DNA Research Institute