>KCC003444A_C01 KCC003444A_c01
gcagattcacatacacgaaGCACAATTAAACTCATATGGACACAGCCCACCCCTCCTAGG
ACGATACAAGCGAGAGGGACTGGAGAGACTTTTCGCCATGGAGGCTCTCCTGGATTTCAA
CAAGCCCATAGATGTGGGCTTGCTCGATGCAGCTGTTAGTGCCTCGATGACATCGGTGGC
GGGGGGCGAAGCGCAGAGAGCTGCCGCGGAAAAGCTGCTTCTCGAGTTTCAGGAGCACCC
GCAAGCCTGGACGCGCGTTGACACGATTCTGGAGGTGTCGCAGAACCAGCCCACCAAGTA
CTTCGCGCTGCAGATCCTCGAGAACGTAATTCGTTTCAAGTGGGGAGCGCTGCCGCTGGA
GCAGCGTGATGGAATCAAGAACTACCTTTCAAACCTCATTATCCGGTTCTCCCAGACCGA
GGAGCTGCTCCGCAAGGAGAGCACCTTCGTCAACAAGCTCAACATCTTGCTGGTCCAAAT
TCTGAAGCACGACTGGCCGGCGCGCTGGA

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003444A_C01 KCC003444A_c01
         (509 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_197204.1| exportin1 (XPO1) [Arabidopsis thaliana] gi|1135...   152  2e-36
gb|AAP21382.1| putative chromosome region maintenance protein [O...   150  1e-35
ref|NP_566193.2| exportin1 (XPO1), putative [Arabidopsis thaliana]    141  4e-33
emb|CAC39223.1| exportin 1b [Arabidopsis thaliana]                    141  4e-33
gb|AAF26113.1|AC012328_16 putative exportin1 (XPO1) protein [Ara...   141  4e-33

>ref|NP_197204.1| exportin1 (XPO1) [Arabidopsis thaliana] gi|11357286|pir||T51557
           Exportin1 (XPO1) protein - Arabidopsis thaliana
           (fragment) gi|25347852|pir||T52638 exportin 1
           [validated] - Arabidopsis thaliana
           gi|5931694|emb|CAB56597.1| Exportin1 (XPO1) protein
           [Arabidopsis thaliana] gi|7671510|emb|CAB89280.1|
           Exportin1 (XPO1) protein [Arabidopsis thaliana]
           gi|9755703|emb|CAC01715.1| Exportin1 (XPO1) protein
           [Arabidopsis thaliana] gi|15810123|gb|AAL07205.1|
           putative exportin1 protein XPO1 [Arabidopsis thaliana]
           gi|20465601|gb|AAM20283.1| putative Exportin1 (XPO1)
           protein [Arabidopsis thaliana]
          Length = 1075

 Score =  152 bits (384), Expect = 2e-36
 Identities = 71/138 (51%), Positives = 102/138 (73%)
 Frame = +2

Query: 95  AMEALLDFNKPIDVGLLDAAVSASMTSVAGGEAQRAAAEKLLLEFQEHPQAWTRVDTILE 274
           A E L D ++PIDVG+LDA V+A    V G + +RAAA+++L + Q +P  W +V  IL+
Sbjct: 2   AAEKLRDLSQPIDVGVLDATVAAFF--VTGSKEERAAADQILRDLQANPDMWLQVVHILQ 59

Query: 275 VSQNQPTKYFALQILENVIRFKWGALPLEQRDGIKNYLSNLIIRFSQTEELLRKESTFVN 454
            + +  TK+FALQ+LE VI+++W ALP+EQRDG+KNY+S +I++ S  E   R E  +VN
Sbjct: 60  NTNSLDTKFFALQVLEGVIKYRWNALPVEQRDGMKNYISEVIVQLSSNEASFRSERLYVN 119

Query: 455 KLNILLVQILKHDWPARW 508
           KLN++LVQI+KHDWPA+W
Sbjct: 120 KLNVILVQIVKHDWPAKW 137

>gb|AAP21382.1| putative chromosome region maintenance protein [Oryza sativa
           (japonica cultivar-group)]
          Length = 1070

 Score =  150 bits (378), Expect = 1e-35
 Identities = 72/136 (52%), Positives = 101/136 (73%)
 Frame = +2

Query: 101 EALLDFNKPIDVGLLDAAVSASMTSVAGGEAQRAAAEKLLLEFQEHPQAWTRVDTILEVS 280
           E L D ++PIDV LLDA V+A   +  G + +R AA+++L + Q +P  W +V  IL+ S
Sbjct: 3   EKLRDLSQPIDVPLLDATVAAFYGT--GSKEERNAADQILRDLQNNPDMWLQVVHILQNS 60

Query: 281 QNQPTKYFALQILENVIRFKWGALPLEQRDGIKNYLSNLIIRFSQTEELLRKESTFVNKL 460
            N  TK+FALQ+LE+VI+++W ALP EQRDGIKNY+S++I++ S  E   R+E  +VNKL
Sbjct: 61  HNLNTKFFALQVLESVIKYRWNALPTEQRDGIKNYISDVIVQLSSNEASFRQERLYVNKL 120

Query: 461 NILLVQILKHDWPARW 508
           NI+LVQ+LKH+WPARW
Sbjct: 121 NIILVQVLKHEWPARW 136

>ref|NP_566193.2| exportin1 (XPO1), putative [Arabidopsis thaliana]
          Length = 1076

 Score =  141 bits (356), Expect = 4e-33
 Identities = 67/138 (48%), Positives = 101/138 (72%)
 Frame = +2

Query: 95  AMEALLDFNKPIDVGLLDAAVSASMTSVAGGEAQRAAAEKLLLEFQEHPQAWTRVDTILE 274
           A E L D ++PIDV LLDA V A  ++  G + +RA+A+ +L + + +P  W +V  IL+
Sbjct: 2   AAEKLRDLSQPIDVVLLDATVEAFYST--GSKEERASADNILRDLKANPDTWLQVVHILQ 59

Query: 275 VSQNQPTKYFALQILENVIRFKWGALPLEQRDGIKNYLSNLIIRFSQTEELLRKESTFVN 454
            + +  TK+FALQ+LE VI+++W ALP+EQRDG+KNY+S++I++ S+ E   R E  +VN
Sbjct: 60  NTSSTHTKFFALQVLEGVIKYRWNALPVEQRDGMKNYISDVIVQLSRDEASFRTERLYVN 119

Query: 455 KLNILLVQILKHDWPARW 508
           KLNI+LVQI+K +WPA+W
Sbjct: 120 KLNIILVQIVKQEWPAKW 137

>emb|CAC39223.1| exportin 1b [Arabidopsis thaliana]
          Length = 1076

 Score =  141 bits (356), Expect = 4e-33
 Identities = 67/138 (48%), Positives = 101/138 (72%)
 Frame = +2

Query: 95  AMEALLDFNKPIDVGLLDAAVSASMTSVAGGEAQRAAAEKLLLEFQEHPQAWTRVDTILE 274
           A E L D ++PIDV LLDA V A  ++  G + +RA+A+ +L + + +P  W +V  IL+
Sbjct: 2   AAEKLRDLSQPIDVVLLDATVEAFYST--GSKEERASADNILRDLKANPDTWLQVVHILQ 59

Query: 275 VSQNQPTKYFALQILENVIRFKWGALPLEQRDGIKNYLSNLIIRFSQTEELLRKESTFVN 454
            + +  TK+FALQ+LE VI+++W ALP+EQRDG+KNY+S++I++ S+ E   R E  +VN
Sbjct: 60  NTSSTHTKFFALQVLEGVIKYRWNALPVEQRDGMKNYISDVIVQLSRDEASFRTERLYVN 119

Query: 455 KLNILLVQILKHDWPARW 508
           KLNI+LVQI+K +WPA+W
Sbjct: 120 KLNIILVQIVKQEWPAKW 137

>gb|AAF26113.1|AC012328_16 putative exportin1 (XPO1) protein [Arabidopsis thaliana]
          Length = 1022

 Score =  141 bits (356), Expect = 4e-33
 Identities = 67/138 (48%), Positives = 101/138 (72%)
 Frame = +2

Query: 95  AMEALLDFNKPIDVGLLDAAVSASMTSVAGGEAQRAAAEKLLLEFQEHPQAWTRVDTILE 274
           A E L D ++PIDV LLDA V A  ++  G + +RA+A+ +L + + +P  W +V  IL+
Sbjct: 2   AAEKLRDLSQPIDVVLLDATVEAFYST--GSKEERASADNILRDLKANPDTWLQVVHILQ 59

Query: 275 VSQNQPTKYFALQILENVIRFKWGALPLEQRDGIKNYLSNLIIRFSQTEELLRKESTFVN 454
            + +  TK+FALQ+LE VI+++W ALP+EQRDG+KNY+S++I++ S+ E   R E  +VN
Sbjct: 60  NTSSTHTKFFALQVLEGVIKYRWNALPVEQRDGMKNYISDVIVQLSRDEASFRTERLYVN 119

Query: 455 KLNILLVQILKHDWPARW 508
           KLNI+LVQI+K +WPA+W
Sbjct: 120 KLNIILVQIVKQEWPAKW 137

EST assemble image

clone accession position 1 MXL019f10_r BP094218 1 509 2 MXL065g02_r BP096841 20 479

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