KCC003433A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003433A_C01 KCC003433A_c01
ccaaggtggtggagcccaagattgccaagctgcgcgaggccgaggctgagctcaagctgg
ccaccaaggagaagaacgccGCCGAGGAGCGCATGGCCAAGGTGCAGGCCAAGCTGGACG
AGATGCAGGCGCAGTTCGATGCCGCCATGGCGCACAAGCAGGCGCTGGAGGACGACGCAG
CGGCCACGCAGCGCAAGATGGACTCCGCCAACGCGCTCATTGGCGCTCTGGCGGGCGAGG
AGGCGCGCTGGACGGCGCAGTCCAAGGAGTTCGACGTGCAGATCCAGCGCCTCACCGGCG
ACTGCGCGCTGGCCTCCGCCTTCGTGTCCTACCTGGGCCCCTTCAACAAGGAGTTCCGCG
AGCTGCTGCTGAACCGCGACTTCTATGGCGACTGCATGAAGCTGAACGTGCCGGTGACGC
CGCACCTGCAAATCACCAAGTTCCTGGTGGACGACAGCGAGGTCGGCGAGTGGAACCTGC
AGGGCCTGCCCACCGACGAGCTGTCCAT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003433A_C01 KCC003433A_c01
         (508 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

sp|Q39575|DYHG_CHLRE Dynein gamma chain, flagellar outer arm gi|...   331  3e-90
gb|EAA39286.1| GLP_532_15619_7592 [Giardia lamblia ATCC 50803]        148  3e-35
ref|XP_307780.1| ENSANGP00000012927 [Anopheles gambiae] gi|30179...   144  5e-34
ref|NP_001362.1| dynein, axonemal, heavy polypeptide 8 [Homo sap...   143  1e-33
ref|XP_226891.2| similar to axonemal dynein heavy chain 5 [Rattu...   143  1e-33

>sp|Q39575|DYHG_CHLRE Dynein gamma chain, flagellar outer arm gi|7441383|pir||T08044 dynein
            gamma heavy chain, outer-arm - Chlamydomonas reinhardtii
            gi|557716|gb|AAA50455.1| gamma heavy chain subunit of
            outer-arm dynein
          Length = 4485

 Score =  331 bits (849), Expect = 3e-90
 Identities = 168/168 (100%), Positives = 168/168 (100%)
 Frame = +3

Query: 3    KVVEPKIAKLREAEAELKLATKEKNAAEERMAKVQAKLDEMQAQFDAAMAHKQALEDDAA 182
            KVVEPKIAKLREAEAELKLATKEKNAAEERMAKVQAKLDEMQAQFDAAMAHKQALEDDAA
Sbjct: 3265 KVVEPKIAKLREAEAELKLATKEKNAAEERMAKVQAKLDEMQAQFDAAMAHKQALEDDAA 3324

Query: 183  ATQRKMDSANALIGALAGEEARWTAQSKEFDVQIQRLTGDCALASAFVSYLGPFNKEFRE 362
            ATQRKMDSANALIGALAGEEARWTAQSKEFDVQIQRLTGDCALASAFVSYLGPFNKEFRE
Sbjct: 3325 ATQRKMDSANALIGALAGEEARWTAQSKEFDVQIQRLTGDCALASAFVSYLGPFNKEFRE 3384

Query: 363  LLLNRDFYGDCMKLNVPVTPHLQITKFLVDDSEVGEWNLQGLPTDELS 506
            LLLNRDFYGDCMKLNVPVTPHLQITKFLVDDSEVGEWNLQGLPTDELS
Sbjct: 3385 LLLNRDFYGDCMKLNVPVTPHLQITKFLVDDSEVGEWNLQGLPTDELS 3432

>gb|EAA39286.1| GLP_532_15619_7592 [Giardia lamblia ATCC 50803]
          Length = 2675

 Score =  148 bits (374), Expect = 3e-35
 Identities = 76/168 (45%), Positives = 114/168 (67%), Gaps = 2/168 (1%)
 Frame = +3

Query: 9    VEPKIAKLREAEAELKLATKEKNAAEERMAKVQAKLDEMQAQFDAAMAHKQALEDDAAAT 188
            VEPK A +REAE+  K A     +A+E +A+ QA L+++Q Q+D A+  K+ L+D+A  T
Sbjct: 1403 VEPKRAAVREAESNFKAAMASLTSAKEDLAEKQAALNKLQEQYDEAVNEKKRLQDEADLT 1462

Query: 189  QRKMDSANALIGALAGEEARWTAQSKEFDVQIQRLTGDCALASAFVSYLGPFNKEFRELL 368
             R++ +A+ALI  L+GE  RW+ Q++E D    RL GD +L+SAF+SY GPFN+E+R+ L
Sbjct: 1463 GRRLHAASALINGLSGERKRWSQQARELDDAAVRLVGDASLSSAFLSYAGPFNQEYRQFL 1522

Query: 369  LNRDFYGDCMKLNVPVTPHL--QITKFLVDDSEVGEWNLQGLPTDELS 506
            + + +  D  +  +P T  +  +I  FLV ++ VGEW LQGLPTD+LS
Sbjct: 1523 VTQIWLKDLEERRLPFTRGIENEIHNFLVSEATVGEWRLQGLPTDQLS 1570

>ref|XP_307780.1| ENSANGP00000012927 [Anopheles gambiae] gi|30179069|gb|EAA03542.2|
            ENSANGP00000012927 [Anopheles gambiae str. PEST]
          Length = 4687

 Score =  144 bits (364), Expect = 5e-34
 Identities = 79/169 (46%), Positives = 109/169 (63%), Gaps = 1/169 (0%)
 Frame = +3

Query: 3    KVVEPKIAKLREAEAELKLATKEKNAAEERMAKVQAKLDEMQAQFDAAMAHKQALEDDAA 182
            K V P  A L   EA L++A  +  AAE ++A+ +A L +++ Q+DAA++ KQ L D A 
Sbjct: 3454 KEVLPLKANLMLQEARLRIAMDDLAAAENQLAEREAALQKVKDQYDAAVSEKQRLTDAAN 3513

Query: 183  ATQRKMDSANALIGALAGEEARWTAQSKEFDVQIQRLTGDCALASAFVSYLGPFNKEFRE 362
            +  RKM +A ALI  L GE+ARWT QSKEF +Q+ +L GD  LA+ F+SY GP+N+EFR 
Sbjct: 3514 SCLRKMTAATALINGLGGEKARWTQQSKEFKIQLGKLVGDVLLATGFLSYCGPYNQEFRG 3573

Query: 363  LLLNRDFYGDCMKL-NVPVTPHLQITKFLVDDSEVGEWNLQGLPTDELS 506
             L     + + +K   +P T +L I   LVD + + EWNLQGLP DELS
Sbjct: 3574 TLFKT--WMEILKTRTIPFTANLNIINMLVDSATISEWNLQGLPNDELS 3620

>ref|NP_001362.1| dynein, axonemal, heavy polypeptide 8 [Homo sapiens]
            gi|14335444|gb|AAK60620.1|AF356519_1 axonemal dynein
            heavy chain 8 [Homo sapiens]
          Length = 4490

 Score =  143 bits (361), Expect = 1e-33
 Identities = 76/166 (45%), Positives = 102/166 (60%)
 Frame = +3

Query: 9    VEPKIAKLREAEAELKLATKEKNAAEERMAKVQAKLDEMQAQFDAAMAHKQALEDDAAAT 188
            V P  A L + E  L +A  E   A+  + + QA+LD++QA+FDAAM  K  L +DA   
Sbjct: 3287 VLPLKANLAKQEGRLAVANAELGKAQALLDEKQAELDKVQAKFDAAMNEKMDLLNDADTC 3346

Query: 189  QRKMDSANALIGALAGEEARWTAQSKEFDVQIQRLTGDCALASAFVSYLGPFNKEFRELL 368
            ++KM +A+ LI  L+GE+ RWT QSKEF  QI RL GD  L + F+SYLGPFN+ FR  L
Sbjct: 3347 RKKMQAASTLIDGLSGEKIRWTQQSKEFKAQINRLVGDILLCTGFLSYLGPFNQIFRNYL 3406

Query: 369  LNRDFYGDCMKLNVPVTPHLQITKFLVDDSEVGEWNLQGLPTDELS 506
            L   +  +     +P T +L +   LVD   +GEW LQGLP D+LS
Sbjct: 3407 LKDQWEMELRARKIPFTENLNLISMLVDPPTIGEWGLQGLPGDDLS 3452

>ref|XP_226891.2| similar to axonemal dynein heavy chain 5 [Rattus norvegicus]
          Length = 2451

 Score =  143 bits (360), Expect = 1e-33
 Identities = 78/168 (46%), Positives = 105/168 (62%)
 Frame = +3

Query: 3    KVVEPKIAKLREAEAELKLATKEKNAAEERMAKVQAKLDEMQAQFDAAMAHKQALEDDAA 182
            K V P  A L   E    LA ++   A+  +   QA+LD +QA+++ AM  KQ L +DA 
Sbjct: 1459 KEVLPLKANLIVQENRHALAMQDLQKAQAELDDKQAELDVVQAEYEQAMTEKQTLLEDAD 1518

Query: 183  ATQRKMDSANALIGALAGEEARWTAQSKEFDVQIQRLTGDCALASAFVSYLGPFNKEFRE 362
              + KM +A+ LI  LAGE+ RWT QSKEF  QI+RL GD  LA+AF+SY GPFN+EFR+
Sbjct: 1519 RCRHKMQTASTLISGLAGEKERWTEQSKEFAAQIKRLVGDVLLATAFLSYSGPFNQEFRD 1578

Query: 363  LLLNRDFYGDCMKLNVPVTPHLQITKFLVDDSEVGEWNLQGLPTDELS 506
            LLLN D+  +     +P    L + + L+D   + EWNLQGLP D+LS
Sbjct: 1579 LLLN-DWKKEMKARKIPFGNDLNLNEMLIDAPTISEWNLQGLPNDDLS 1625



EST assemble image


clone accession position
1 MXL014g05_r BP093854 1 458
2 MXL064d11_r BP096760 134 508




Chlamydomonas reinhardtii
Kazusa DNA Research Institute