Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003429A_C01 KCC003429A_c01
(489 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_292889.2| similar to Gnot1 homeodomain protein [Homo sapi... 37 0.17
dbj|BAA25636.1| HAPE [Aspergillus oryzae] 35 0.37
ref|XP_310234.1| ENSANGP00000024308 [Anopheles gambiae] gi|30178... 33 1.9
ref|XP_342517.1| similar to small nuclear ribonucleoprotein B [R... 32 3.2
ref|NP_491330.1| putative protein (1E781) [Caenorhabditis elegan... 32 3.2
>ref|XP_292889.2| similar to Gnot1 homeodomain protein [Homo sapiens]
Length = 251
Score = 36.6 bits (83), Expect = 0.17
Identities = 23/69 (33%), Positives = 26/69 (37%), Gaps = 1/69 (1%)
Frame = -2
Query: 413 PDRC-PGTLPPCYSLCQHPTHHSAACRPRMSHSPWPW*PGVCERLWCLVYLLVACHSVPG 237
PD C P P S C HP +AA PW C W YL V + VPG
Sbjct: 58 PDPCAPAASQPSGSACVHPAFWTAASLCATGGLPW-----ACPTSWLPAYLSVGFYPVPG 112
Query: 236 SSFSGDCSL 210
+ C L
Sbjct: 113 PRVAPVCGL 121
>dbj|BAA25636.1| HAPE [Aspergillus oryzae]
Length = 265
Score = 35.4 bits (80), Expect = 0.37
Identities = 17/43 (39%), Positives = 25/43 (57%)
Frame = -2
Query: 473 STGTSRASSKSARAGACSIGPDRCPGTLPPCYSLCQHPTHHSA 345
+T ++ SS++A A + + GP G LPP QHP+HH A
Sbjct: 167 ATSHAKRSSQAAGAPSGAPGPTGAAGQLPPSQHGVQHPSHHMA 209
>ref|XP_310234.1| ENSANGP00000024308 [Anopheles gambiae] gi|30178239|gb|EAA45251.1|
ENSANGP00000024308 [Anopheles gambiae str. PEST]
Length = 114
Score = 33.1 bits (74), Expect = 1.9
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +2
Query: 173 VSRADFWSGLCATRSNHLRMSSPERNDTLQVDTLDTRAARKRLVTKAKEN 322
V R FW+G ATR + +R+ + TL+V + R A K AK N
Sbjct: 63 VQRRSFWAGAHATRRHRVRVRTQTPTHTLRVPFVPLRIAPKAEARAAKRN 112
>ref|XP_342517.1| similar to small nuclear ribonucleoprotein B [Rattus norvegicus]
Length = 327
Score = 32.3 bits (72), Expect = 3.2
Identities = 23/72 (31%), Positives = 32/72 (43%), Gaps = 5/72 (6%)
Frame = -3
Query: 211 CSTEPAPKVSPADGPTA-RLNKKLAGASKLSTYNLLATEVQGHVLSDGVWQ----GMAPV 47
C + K+ P + A R K++ G L NL++ V+G DG WQ G A
Sbjct: 167 CDCDEFRKIKPKNSKQAEREEKRVLGLVLLRGENLVSMTVEGPPPKDGCWQRNPGGCAHA 226
Query: 46 AGLCKLFSWTCA 11
G C+ WT A
Sbjct: 227 PGSCRA-CWTSA 237
>ref|NP_491330.1| putative protein (1E781) [Caenorhabditis elegans]
gi|14573840|gb|AAB52949.2| Hypothetical protein C18E3.1
[Caenorhabditis elegans]
Length = 335
Score = 32.3 bits (72), Expect = 3.2
Identities = 18/48 (37%), Positives = 26/48 (53%)
Frame = +2
Query: 110 KIVRAQLACTSQLFV*ARCRPVSRADFWSGLCATRSNHLRMSSPERND 253
K R + TS L+ R PV R D+W +SN L++S+ E+ND
Sbjct: 239 KADRVKRVSTSTLY---RTEPVQRVDYWRSF---KSNELKLSTVEKND 280
