Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003427A_C01 KCC003427A_c01
(476 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAA23040.1| putative [Caulobacter crescentus] 39 0.024
ref|NP_044528.1| RL2 [Human herpesvirus 2] gi|1869881|emb|CAB067... 39 0.031
ref|NP_044469.1| RL2 [Human herpesvirus 2] gi|124135|sp|P28284|I... 39 0.031
ref|NP_476780.1| u-shaped CG2762-PA [Drosophila melanogaster] gi... 39 0.040
pir||T13850 gene u-shaped protein - fruit fly (Drosophila melano... 39 0.040
>gb|AAA23040.1| putative [Caulobacter crescentus]
Length = 682
Score = 39.3 bits (90), Expect = 0.024
Identities = 43/135 (31%), Positives = 53/135 (38%)
Frame = +1
Query: 31 PRPAAAPQLPRWCCAVPYVRTRQPACRRPRAARQVPTILGCCLWARRNQDASPAARALST 210
PRPAA P R CA PY R PA R A +LG RR D P R +
Sbjct: 558 PRPAADPGRRRRGCA-PY-RVGHPAGRAGPCAPGPSAVLGQSRRRRRPADHHPVGRLGAG 615
Query: 211 WKRWTQSKTPCAPRCLCWWRACRPASATPALRRRWCTPQQTRRCPGLGLLRTWLGTAAEP 390
+R P PR R A+ PAL P+ R+ R G A +P
Sbjct: 616 LRRG-----PDRPRR-------RQATGPPALAPAGLHPRGARQLRARRSGRRGAGAADQP 663
Query: 391 AAAALCPWARSAGSS 435
++LCP A S+
Sbjct: 664 GRSSLCPLDHRAPSA 678
>ref|NP_044528.1| RL2 [Human herpesvirus 2] gi|1869881|emb|CAB06705.1| RL2 [Human
herpesvirus 2]
Length = 826
Score = 38.9 bits (89), Expect = 0.031
Identities = 23/67 (34%), Positives = 38/67 (56%)
Frame = +3
Query: 267 ASLQTSISNARSEAALVHAAANAALPRSGSSAHLAGYGGGAGSSGPVSVGAFGRQQSQLA 446
+S +S S + S A+ A++++A S SS+ + GGAG S + GA R+++ L
Sbjct: 592 SSSASSSSASSSSASSSSASSSSASSSSASSSSASSSAGGAGGSVASASGAGERRETSLG 651
Query: 447 PASATPR 467
P +A PR
Sbjct: 652 PRAAAPR 658
>ref|NP_044469.1| RL2 [Human herpesvirus 2] gi|124135|sp|P28284|ICP0_HSV2H
Trans-acting transcriptional protein ICP0 (VMW118
protein) gi|73650|pir||EDBEXD immediate-early protein
RL2 - human herpesvirus 2 (strain HG52)
gi|1869822|emb|CAB06760.1| RL2 [Human herpesvirus 2]
gi|2626942|dbj|BAA23427.1| Vmw118(ICP0) [Human
herpesvirus 2]
Length = 825
Score = 38.9 bits (89), Expect = 0.031
Identities = 23/67 (34%), Positives = 38/67 (56%)
Frame = +3
Query: 267 ASLQTSISNARSEAALVHAAANAALPRSGSSAHLAGYGGGAGSSGPVSVGAFGRQQSQLA 446
+S +S S + S A+ A++++A S SS+ + GGAG S + GA R+++ L
Sbjct: 591 SSSASSSSASSSSASSSSASSSSASSSSASSSSASSSAGGAGGSVASASGAGERRETSLG 650
Query: 447 PASATPR 467
P +A PR
Sbjct: 651 PRAAAPR 657
>ref|NP_476780.1| u-shaped CG2762-PA [Drosophila melanogaster]
gi|22945566|gb|AAF51488.2| CG2762-PA [Drosophila
melanogaster]
Length = 1191
Score = 38.5 bits (88), Expect = 0.040
Identities = 38/140 (27%), Positives = 59/140 (42%), Gaps = 5/140 (3%)
Frame = +3
Query: 39 GGGSAVAEMVLCSPLRENTPTGMSPPACGSSSAHDTGLLLVGQTQPRRITRSTSVIHMEE 218
GGGS E ++C+P ++P+ P + S +G P + + +V H+ +
Sbjct: 589 GGGSVTPEQIVCAPSLPSSPSMSPSPKRRAISPRSSGAGSASSMSPPGL--NVAVPHLLD 646
Query: 219 MDPVQNTMRAQMPLLVASLQTSISNARSEAALVHAAANAALPRSGSSAHL----AGYGGG 386
MR+ +P ++ ++ E AL AAA AA +GSS A
Sbjct: 647 -------MRSMLPADFGLSESLLAKTNPELALKLAAAAAAAAVAGSSGAAAFPPASLPAQ 699
Query: 387 AGSSGPVSVG-AFGRQQSQL 443
S P S G A G QQ Q+
Sbjct: 700 TSSGNPGSGGSAGGAQQPQI 719
>pir||T13850 gene u-shaped protein - fruit fly (Drosophila melanogaster)
gi|2597859|emb|CAA72991.1| u-shaped [Drosophila
melanogaster]
Length = 1191
Score = 38.5 bits (88), Expect = 0.040
Identities = 38/140 (27%), Positives = 59/140 (42%), Gaps = 5/140 (3%)
Frame = +3
Query: 39 GGGSAVAEMVLCSPLRENTPTGMSPPACGSSSAHDTGLLLVGQTQPRRITRSTSVIHMEE 218
GGGS E ++C+P ++P+ P + S +G P + + +V H+ +
Sbjct: 589 GGGSVTPEQIVCAPSLPSSPSMSPSPKRRAISPRSSGAGSASSMSPPGL--NVAVPHLLD 646
Query: 219 MDPVQNTMRAQMPLLVASLQTSISNARSEAALVHAAANAALPRSGSSAHL----AGYGGG 386
MR+ +P ++ ++ E AL AAA AA +GSS A
Sbjct: 647 -------MRSMLPADFGLSESLLAKTNPELALKLAAAAAAAAVAGSSGAAAFPPASLPAQ 699
Query: 387 AGSSGPVSVG-AFGRQQSQL 443
S P S G A G QQ Q+
Sbjct: 700 TSSGNPGSGGSAGGAQQPQI 719
