Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003423A_C01 KCC003423A_c01
(345 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAC05743.2| alternative oxidase [Chlamydomonas reinhardtii] g... 168 2e-41
pir||T07947 alternative oxidase 1 - Chlamydomonas reinhardtii 129 1e-29
ref|ZP_00054711.1| COG0520: Selenocysteine lyase [Magnetospirill... 39 0.019
ref|ZP_00059556.1| hypothetical protein [Thermobifida fusca] 39 0.025
emb|CAC85939.1| transcription regulator protein [Mycobacteriopha... 39 0.025
>gb|AAC05743.2| alternative oxidase [Chlamydomonas reinhardtii]
gi|11245480|gb|AAG33633.1|AF314254_1 alternative oxidase
1 [Chlamydomonas reinhardtii]
Length = 360
Score = 168 bits (425), Expect = 2e-41
Identities = 84/87 (96%), Positives = 85/87 (97%)
Frame = +3
Query: 84 MLQTAPMLLPGLGPHLVPQLGALASASRLLGFIASIPPQHGGAGFQAVRGFATGAVSTPA 263
MLQTAPML PGLGPHLVPQLGALASASRLLG IAS+PPQHGGAGFQAVRGFATGAVSTPA
Sbjct: 1 MLQTAPML-PGLGPHLVPQLGALASASRLLGSIASVPPQHGGAGFQAVRGFATGAVSTPA 59
Query: 264 ASSPGHKPAATHAPPTRLDLKPGAGSF 344
ASSPGHKPAATHAPPTRLDLKPGAGSF
Sbjct: 60 ASSPGHKPAATHAPPTRLDLKPGAGSF 86
>pir||T07947 alternative oxidase 1 - Chlamydomonas reinhardtii
Length = 339
Score = 129 bits (324), Expect = 1e-29
Identities = 62/65 (95%), Positives = 64/65 (98%)
Frame = +3
Query: 150 LASASRLLGFIASIPPQHGGAGFQAVRGFATGAVSTPAASSPGHKPAATHAPPTRLDLKP 329
+ASASRLLG IAS+PPQHGGAGFQAVRGFATGAVSTPAASSPGHKPAATHAPPTRLDLKP
Sbjct: 1 MASASRLLGSIASVPPQHGGAGFQAVRGFATGAVSTPAASSPGHKPAATHAPPTRLDLKP 60
Query: 330 GAGSF 344
GAGSF
Sbjct: 61 GAGSF 65
>ref|ZP_00054711.1| COG0520: Selenocysteine lyase [Magnetospirillum magnetotacticum]
Length = 331
Score = 38.9 bits (89), Expect = 0.019
Identities = 33/86 (38%), Positives = 36/86 (41%), Gaps = 5/86 (5%)
Frame = +3
Query: 78 IAMLQTAPMLLPG----LGPHLVPQLGALASASRLLG-FIASIPPQHGGAGFQAVRGFAT 242
I L AP PG P + P G L S LLG IA +PP H GAG A
Sbjct: 99 IGPLAAAPAAPPGNPAAFPPTVFPGEGDLRSLPNLLGSIIALVPPDH-GAGHGADPSVPG 157
Query: 243 GAVSTPAASSPGHKPAATHAPPTRLD 320
G+ P AS P T AP R D
Sbjct: 158 GSPEIPDASIPNLPSVPTGAPQARPD 183
>ref|ZP_00059556.1| hypothetical protein [Thermobifida fusca]
Length = 368
Score = 38.5 bits (88), Expect = 0.025
Identities = 23/59 (38%), Positives = 27/59 (44%)
Frame = -3
Query: 280 WPGELAAGVLTAPVANPRTAWKPAPPCWGGIEAMKPRRREALARAPNCGTRCGPRPGRS 104
W G AG T+P A PRT + APP + +PNC TRCG P RS
Sbjct: 295 WTGSPHAGTATSPCAVPRT--RTAPP--------------RSSASPNCATRCGTTPWRS 337
>emb|CAC85939.1| transcription regulator protein [Mycobacteriophage L1]
Length = 134
Score = 38.5 bits (88), Expect = 0.025
Identities = 25/70 (35%), Positives = 34/70 (47%), Gaps = 8/70 (11%)
Frame = -1
Query: 345 RRSRRRA*GPGGWAAHAWQRACG--------RGSWQQACSRRPWRIPGQPGSQHHRAGAE 190
RR RRR GW+ +R G R W++ SRR W+ P PG+ HRAG E
Sbjct: 7 RRRRRR-----GWSCREQRRRQGNRQRRYRRRHRWRRKWSRRRWQQPQHPGAP-HRAGEE 60
Query: 189 SKL*SPEDEK 160
++ P+ K
Sbjct: 61 ARRIQPDPSK 70
