Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003403A_C01 KCC003403A_c01
(396 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_824569.1| hypothetical protein [Streptomyces avermitilis ... 40 0.010
ref|NP_335196.1| hypothetical protein [Mycobacterium tuberculosi... 39 0.017
emb|CAD40833.1| OSJNBa0086B14.5 [Oryza sativa (japonica cultivar... 39 0.023
ref|NP_626507.1| putative multi-domain regulatory protein. [Stre... 38 0.039
pir||EDBEIF immediate-early protein IE180 - suid herpesvirus 1 (... 37 0.066
>ref|NP_824569.1| hypothetical protein [Streptomyces avermitilis MA-4680]
gi|29607045|dbj|BAC71104.1| hypothetical protein
[Streptomyces avermitilis MA-4680]
Length = 353
Score = 39.7 bits (91), Expect = 0.010
Identities = 31/90 (34%), Positives = 39/90 (42%), Gaps = 8/90 (8%)
Frame = +2
Query: 65 LATRSVGGSTTSSFHHLIPAQSYGLQRPRAPARLTADWPGVAPLAGPPL-----PGTAP- 226
L T G+TT S P + G +P APA D PG A GP PG+AP
Sbjct: 47 LCTNCANGTTTESTVPATPDAAAGAPQPAAPASPKPDAPGFAQSDGPGFAPPGGPGSAPP 106
Query: 227 --ATTATP*PPASRKGQGGRVTMIKS*CGL 310
TA P A GG+ + ++S GL
Sbjct: 107 GALPTAPPLGAAPLYAPGGQPSWLRSPVGL 136
>ref|NP_335196.1| hypothetical protein [Mycobacterium tuberculosis CDC1551]
gi|13880311|gb|AAK45010.1| hypothetical protein
[Mycobacterium tuberculosis CDC1551]
Length = 80
Score = 38.9 bits (89), Expect = 0.017
Identities = 27/74 (36%), Positives = 32/74 (42%)
Frame = +2
Query: 86 GSTTSSFHHLIPAQSYGLQRPRAPARLTADWPGVAPLAGPPLPGTAPATTATP*PPASRK 265
G+ IP QRP A R +PG A A P+PGTA +ATP P SR
Sbjct: 2 GAAAPGISAKIPGARALCQRPVA-GRRDDGYPGGAGFAARPVPGTAARLSATPPRPVSRP 60
Query: 266 GQGGRVTMIKS*CG 307
G T + CG
Sbjct: 61 AAGACETCGSAACG 74
>emb|CAD40833.1| OSJNBa0086B14.5 [Oryza sativa (japonica cultivar-group)]
Length = 415
Score = 38.5 bits (88), Expect = 0.023
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Frame = +1
Query: 145 SPRASPAYSRLAWSCPPGRPAPAG---NGAGNDRHALTTCFAQGPGGPRDDDQKLMRIEN 315
+P ASP S W+CPP PAP+ +GA R PGG D D+ RI N
Sbjct: 36 TPFASP--SPAPWACPPAFPAPSPSPLHGAAGGRRDQGGYHGSPPGGGGDADEHRRRIIN 93
Query: 316 RELLVGDVVAIINFCLYKQIAAI 384
++ +A ++ L I A+
Sbjct: 94 LIVVGAAALAFLSMILLVVIVAV 116
>ref|NP_626507.1| putative multi-domain regulatory protein. [Streptomyces coelicolor
A3(2)] gi|11356702|pir||T50568 probable multi-domain
regulatory protein [imported] - Streptomyces coelicolor
gi|6469244|emb|CAB61705.1| putative multi-domain
regulatory protein. [Streptomyces coelicolor A3(2)]
Length = 1334
Score = 37.7 bits (86), Expect = 0.039
Identities = 20/33 (60%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +2
Query: 155 PARLTADWPGVAPLAGP-PLPGTAPATTATP*P 250
PAR T+ PG AP+AG P PGTAPA +TP P
Sbjct: 400 PARDTSYAPGTAPVAGTTPAPGTAPAPGSTPAP 432
Score = 30.4 bits (67), Expect = 6.2
Identities = 18/45 (40%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = +2
Query: 119 PAQSYGLQRPRAPARLTADWPGVAPLAGP-PLPGTAPATTATP*P 250
PA+ AP T PG AP G P PGT PA P P
Sbjct: 400 PARDTSYAPGTAPVAGTTPAPGTAPAPGSTPAPGTVPAPGTAPAP 444
>pir||EDBEIF immediate-early protein IE180 - suid herpesvirus 1 (strain
Indiana-Funkhauser)
Length = 1460
Score = 37.0 bits (84), Expect = 0.066
Identities = 22/52 (42%), Positives = 24/52 (45%)
Frame = +2
Query: 119 PAQSYGLQRPRAPARLTADWPGVAPLAGPPLPGTAPATTATP*PPASRKGQG 274
P Q QRP PA PG P PP P PA A P PPA R+ +G
Sbjct: 150 PRQHSQRQRPGPPAA-----PGARPPPQPPRPPPPPAPPAPPAPPAPRRPRG 196
