KCC003401A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003401A_C01 KCC003401A_c01
ccctagtCTAAACAGTCCAAGTGCTTGTCCTTGAACGAAAGCCCTCTTCGCGAAATCCCG
CTCAGAGATCTCCGCGCCTTTGCACACGAAAGCCTATATAGCGACCCGCTGCAGCCATGA
GCGCACGGTATGATAGAGCTATTACTGTCTTCTCGCCCGACGGGCACCTGTTCCAAGTGG
AGTATGCATTGGAGGCAGTGCGGAAGGGTGCCCTCGCGGTTGGCGTGAAGGGCAAGGACA
CTGTCGTGCTAGGAGTGGAGAAGAAGTCCACAGCCAAGCTGCAGGATGCGCGCACGGTGC
GCAAGATTGTCAAGGTGGACGACCATATCTGCCTCGCCTTCGCCGGTCTCACAGCCGACG
CGCGTGTGCTCGTCAACCGCGCGCGCATTGAGGCGCAGAGCTACCGCCTCACACTAGACG
AGAAGGTTACTGTGGACTACATTACCAAGTACATTGCGGGCGTGCAGCAGCGCT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003401A_C01 KCC003401A_c01
         (474 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

sp|P34120|PSA7_DICDI Proteasome subunit alpha type 7 (Proteasome...   191  5e-48
gb|AAO50739.1| similar to Dictyostelium discoideum (Slime mold)....   189  1e-47
sp|Q9SXU1|PSA7_CICAR Proteasome subunit alpha type 7 (20S protea...   186  9e-47
sp|O24030|PSA7_LYCES Proteasome subunit alpha type 7 (20S protea...   186  2e-46
sp|Q9PTW9|PSA7_CARAU Proteasome subunit alpha type 7 (Proteasome...   184  4e-46

>sp|P34120|PSA7_DICDI Proteasome subunit alpha type 7 (Proteasome component DD5)
           gi|347511|gb|AAA33234.1| proteasome
          Length = 250

 Score =  191 bits (484), Expect = 5e-48
 Identities = 90/118 (76%), Positives = 111/118 (93%)
 Frame = +3

Query: 120 SARYDRAITVFSPDGHLFQVEYALEAVRKGALAVGVKGKDTVVLGVEKKSTAKLQDARTV 299
           SARYDRAITVFSPDGHLFQVEYA+EAVRKG +AVGV+GKD +VLGVEKK+TAKLQDAR++
Sbjct: 3   SARYDRAITVFSPDGHLFQVEYAMEAVRKGTVAVGVRGKDVIVLGVEKKATAKLQDARSI 62

Query: 300 RKIVKVDDHICLAFAGLTADARVLVNRARIEAQSYRLTLDEKVTVDYITKYIAGVQQR 473
           RKIVK+DDHICL FAGLTAD+RVL+++A +E QSYRLT+++  +V+YI+K+IAG+QQR
Sbjct: 63  RKIVKLDDHICLTFAGLTADSRVLISKALMECQSYRLTVEDSPSVEYISKFIAGIQQR 120

>gb|AAO50739.1| similar to Dictyostelium discoideum (Slime mold). Proteasome
           subunit alpha type 7 (EC 3.4.99.46) (Proteasome
           component DD5)
          Length = 250

 Score =  189 bits (481), Expect = 1e-47
 Identities = 90/118 (76%), Positives = 110/118 (92%)
 Frame = +3

Query: 120 SARYDRAITVFSPDGHLFQVEYALEAVRKGALAVGVKGKDTVVLGVEKKSTAKLQDARTV 299
           SARYDRAITVFSPDGHLFQVEYA+EAVRKG +AVGV+GKD +VLGVEKK+TAKLQDAR++
Sbjct: 3   SARYDRAITVFSPDGHLFQVEYAMEAVRKGTVAVGVRGKDVIVLGVEKKATAKLQDARSI 62

Query: 300 RKIVKVDDHICLAFAGLTADARVLVNRARIEAQSYRLTLDEKVTVDYITKYIAGVQQR 473
           RKIVK+DDHICL FAGLTAD+RVL+++A +E QSYRLT+++  +V+YI K+IAG+QQR
Sbjct: 63  RKIVKLDDHICLTFAGLTADSRVLISKALMECQSYRLTVEDSPSVEYIFKFIAGIQQR 120

>sp|Q9SXU1|PSA7_CICAR Proteasome subunit alpha type 7 (20S proteasome alpha subunit D)
           (20S proteasome subunit alpha-4)
           gi|4586592|dbj|BAA76428.1| multicatalytic endopeptidase
           complex [Cicer arietinum]
          Length = 249

 Score =  186 bits (473), Expect = 9e-47
 Identities = 93/117 (79%), Positives = 106/117 (90%)
 Frame = +3

Query: 123 ARYDRAITVFSPDGHLFQVEYALEAVRKGALAVGVKGKDTVVLGVEKKSTAKLQDARTVR 302
           ARYDRAITVFSPDGHLFQVEYALEAVRKG  AVGV+G D VVLGVEKKSTAKLQD R+VR
Sbjct: 2   ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDNVVLGVEKKSTAKLQDTRSVR 61

Query: 303 KIVKVDDHICLAFAGLTADARVLVNRARIEAQSYRLTLDEKVTVDYITKYIAGVQQR 473
           KIV +DDHI LA AGL ADARVL+NRAR+E QS+RLT+++ VTV+YIT+YIAG+QQ+
Sbjct: 62  KIVNLDDHIALACAGLKADARVLINRARVECQSHRLTVEDPVTVEYITRYIAGLQQK 118

>sp|O24030|PSA7_LYCES Proteasome subunit alpha type 7 (20S proteasome alpha subunit D)
           (20S proteasome subunit alpha-4) gi|7435877|pir||T07744
           C 3.4.25.1 proteasome endopeptidase complex () alpha
           chain - tomato gi|2315211|emb|CAA74725.1| proteasome
           alpha subunit [Lycopersicon esculentum]
          Length = 259

 Score =  186 bits (471), Expect = 2e-46
 Identities = 93/117 (79%), Positives = 107/117 (90%)
 Frame = +3

Query: 123 ARYDRAITVFSPDGHLFQVEYALEAVRKGALAVGVKGKDTVVLGVEKKSTAKLQDARTVR 302
           ARYDRAITVFSPDGHLFQVEYA+EAVRKG  AVGV+G DTVVLGVEKKST KLQD+R+VR
Sbjct: 2   ARYDRAITVFSPDGHLFQVEYAMEAVRKGNAAVGVRGTDTVVLGVEKKSTPKLQDSRSVR 61

Query: 303 KIVKVDDHICLAFAGLTADARVLVNRARIEAQSYRLTLDEKVTVDYITKYIAGVQQR 473
           KIV +DDHI LA AGL ADARVLVN+ARIE QS+RLT+++ VTV+YIT+YIAG+QQ+
Sbjct: 62  KIVNLDDHIALACAGLKADARVLVNKARIECQSHRLTVEDPVTVEYITRYIAGLQQK 118

>sp|Q9PTW9|PSA7_CARAU Proteasome subunit alpha type 7 (Proteasome subunit alpha 4)
           gi|6683668|dbj|BAA89276.1| alpha 4 subunit of 20S
           proteasome [Carassius auratus]
          Length = 251

 Score =  184 bits (468), Expect = 4e-46
 Identities = 87/119 (73%), Positives = 109/119 (91%)
 Frame = +3

Query: 117 MSARYDRAITVFSPDGHLFQVEYALEAVRKGALAVGVKGKDTVVLGVEKKSTAKLQDART 296
           M+ARYDRAITVFSPDGHLFQVEYA EAV+KG+ AVG++GKD VVLGVEKKS AKLQ+ RT
Sbjct: 1   MAARYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGIRGKDIVVLGVEKKSVAKLQEERT 60

Query: 297 VRKIVKVDDHICLAFAGLTADARVLVNRARIEAQSYRLTLDEKVTVDYITKYIAGVQQR 473
           VRKI  +D+H+C+AFAGLTADAR+++NRAR+E QS+RLT+++ VTV+YIT+YIA ++QR
Sbjct: 61  VRKICALDEHVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIATLKQR 119



EST assemble image


clone accession position
1 MXL009e09_r BP093519 1 474
2 MX216a01_r BP089918 8 385




Chlamydomonas reinhardtii
Kazusa DNA Research Institute