Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003394A_C01 KCC003394A_c01
(467 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_191085.1| expressed protein [Arabidopsis thaliana] gi|113... 43 0.002
dbj|BAC65695.1| mKIAA0978 protein [Mus musculus] 40 0.017
gb|AAH32191.1| Cherp protein [Mus musculus] 39 0.039
ref|NP_613051.2| SR-related CTD associated factor 6 [Mus musculu... 39 0.039
gb|AAH20488.1| Unknown (protein for MGC:18828) [Mus musculus] 39 0.039
>ref|NP_191085.1| expressed protein [Arabidopsis thaliana] gi|11358241|pir||T47664
hypothetical protein T26I12.130 - Arabidopsis thaliana
gi|7019658|emb|CAB75759.1| putative protein [Arabidopsis
thaliana] gi|20466654|gb|AAM20644.1| putative protein
[Arabidopsis thaliana] gi|22136462|gb|AAM91309.1|
putative protein [Arabidopsis thaliana]
Length = 277
Score = 43.1 bits (100), Expect = 0.002
Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Frame = +1
Query: 265 AKKVQGSLPIVGLVSRLAAPEGGF--DELAYPEFCRAMIDKCPVSYRIAQAEMEKKYGKP 438
A KV GSLP++GL++R+ + EGG D + + EF + + +KC A E +++ GK
Sbjct: 58 ANKVIGSLPVIGLLARIISDEGGVGRDLVDFAEFRKRVGNKCTPDDSRAFYEFQQRRGKA 117
Query: 439 ANSRWILL 462
++LL
Sbjct: 118 GEPLYVLL 125
>dbj|BAC65695.1| mKIAA0978 protein [Mus musculus]
Length = 1579
Score = 39.7 bits (91), Expect = 0.017
Identities = 28/82 (34%), Positives = 37/82 (44%), Gaps = 8/82 (9%)
Frame = -2
Query: 358 TPGTPARQSRPPALRDARQGQR*GAIPAPSLR--------RPLSR*RNHPSAPPSRRRMR 203
+PG PA R AL A R +P P + RP R R P PP RRRM+
Sbjct: 8 SPGAPALSGRTRALARAAAATRPPPLPPPPPQPRAATAPVRPARRTRVEPPPPPRRRRMK 67
Query: 202 GESCWRPCAVSAQAARSVVERW 137
+ + A+AAR V+E +
Sbjct: 68 DKQKRKKERTWAEAARLVLENY 89
>gb|AAH32191.1| Cherp protein [Mus musculus]
Length = 913
Score = 38.5 bits (88), Expect = 0.039
Identities = 32/92 (34%), Positives = 46/92 (49%)
Frame = +2
Query: 179 ARSPTALAAHASS*RRSRRVISSAG*RPSQRRCRDRSLSLALSRVSQRRRAALTSWRTRS 358
+RS + +SS SR SS S R R RS S + SR R R++ + R+RS
Sbjct: 725 SRSRSKSRGRSSSRSSSRSSKSSRSSSRSHSRSRSRSSSRSRSRSRSRSRSSRSRSRSRS 784
Query: 359 SAGQ*LTSAQSATG*RRRRWRRSMASPPTAAG 454
+ ++S + RRRR R +PP+AAG
Sbjct: 785 RS-----RSKSYSPGRRRRSRSRSPTPPSAAG 811
>ref|NP_613051.2| SR-related CTD associated factor 6 [Mus musculus]
gi|25992620|gb|AAN77182.1| SR-related CTD associated
factor 6 [Mus musculus]
Length = 936
Score = 38.5 bits (88), Expect = 0.039
Identities = 32/92 (34%), Positives = 46/92 (49%)
Frame = +2
Query: 179 ARSPTALAAHASS*RRSRRVISSAG*RPSQRRCRDRSLSLALSRVSQRRRAALTSWRTRS 358
+RS + +SS SR SS S R R RS S + SR R R++ + R+RS
Sbjct: 748 SRSRSKSRGRSSSRSSSRSSKSSRSSSRSHSRSRSRSSSRSRSRSRSRSRSSRSRSRSRS 807
Query: 359 SAGQ*LTSAQSATG*RRRRWRRSMASPPTAAG 454
+ ++S + RRRR R +PP+AAG
Sbjct: 808 RS-----RSKSYSPGRRRRSRSRSPTPPSAAG 834
>gb|AAH20488.1| Unknown (protein for MGC:18828) [Mus musculus]
Length = 902
Score = 38.5 bits (88), Expect = 0.039
Identities = 32/92 (34%), Positives = 46/92 (49%)
Frame = +2
Query: 179 ARSPTALAAHASS*RRSRRVISSAG*RPSQRRCRDRSLSLALSRVSQRRRAALTSWRTRS 358
+RS + +SS SR SS S R R RS S + SR R R++ + R+RS
Sbjct: 714 SRSRSKSRGRSSSRSSSRSSKSSRSSSRSHSRSRSRSSSRSRSRSRSRSRSSRSRSRSRS 773
Query: 359 SAGQ*LTSAQSATG*RRRRWRRSMASPPTAAG 454
+ ++S + RRRR R +PP+AAG
Sbjct: 774 RS-----RSKSYSPGRRRRSRSRSPTPPSAAG 800
