KCC003393A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003393A_C01 KCC003393A_c01
ggctgaggaatcggacgaggcaagcacgaaaactaagtcagcgaACCCGGCTTCGGACGC
CCAAAAGCTTGCAAGCAAAAAACCATGGCGCTCGCGAACCACCATCTTTACCGCGGACAC
AGCCTACTCAGGCGTATTCCATCGGACGTCAGGGCCGCGGTGACATCCCGCATTGTCTTC
CCGCGAGCTAGTGTGGTGGCTCAGGCATCGCCGATGGCGACCGACGCTGCGCCGGAGGCG
CCCACTGCTCAAGCAGGGTCTGCACAGAAGCGCGTTGTGTACGTGGTGGGCGGCCCCGGC
TCAGGGAAAGGGACTCAGTGCGACATGTTGGCGCGCGACTTTGGCGTGCCGTTCTTCAGC
GCCGGCGAGTTGATTCGCTCTCTCATTGCCA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003393A_C01 KCC003393A_c01
         (391 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|XP_330000.1| hypothetical protein [Neurospora crassa] gi|289...    56  1e-07
emb|CAC22640.1| possible adenylate kinase [Leishmania major]           55  2e-07
emb|CAE04607.1| OSJNBb0004G23.5 [Oryza sativa (japonica cultivar...    55  3e-07
sp|P20425|KCY_DICDI Cytidylate kinase (Deoxycytidylate kinase) (...    52  2e-06
ref|XP_318420.1| ENSANGP00000014384 [Anopheles gambiae] gi|21301...    52  2e-06

>ref|XP_330000.1| hypothetical protein [Neurospora crassa] gi|28926251|gb|EAA35232.1|
           hypothetical protein [Neurospora crassa]
          Length = 225

 Score = 55.8 bits (133), Expect = 1e-07
 Identities = 31/68 (45%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
 Frame = +1

Query: 181 PRASVVAQASPMATDAAPEAPTAQAGS-AQKRVVYVVGGPGSGKGTQCDMLARDFGVPFF 357
           P +S  A A+P     AP   T  A S +   V++V+GGPG+GKGTQC  L RD+G    
Sbjct: 5   PTSSSSAAAAP-----APATTTTPAFSPSDVTVIFVLGGPGAGKGTQCARLVRDYGFTHL 59

Query: 358 SAGELIRS 381
           SAG+L+R+
Sbjct: 60  SAGDLLRA 67

>emb|CAC22640.1| possible adenylate kinase [Leishmania major]
          Length = 211

 Score = 55.5 bits (132), Expect = 2e-07
 Identities = 23/41 (56%), Positives = 30/41 (73%)
 Frame = +1

Query: 256 GSAQKRVVYVVGGPGSGKGTQCDMLARDFGVPFFSAGELIR 378
           G+  ++V +++GGPGSGKGT C  L  DFG   FSAGEL+R
Sbjct: 14  GTTPRKVFFILGGPGSGKGTNCARLVEDFGYTHFSAGELLR 54

>emb|CAE04607.1| OSJNBb0004G23.5 [Oryza sativa (japonica cultivar-group)]
          Length = 228

 Score = 54.7 bits (130), Expect = 3e-07
 Identities = 25/53 (47%), Positives = 35/53 (65%)
 Frame = +1

Query: 232 PEAPTAQAGSAQKRVVYVVGGPGSGKGTQCDMLARDFGVPFFSAGELIRSLIA 390
           P+      G+ +  + +V+GGPGSGKGTQC  +A DFG    SAG+L+RS I+
Sbjct: 30  PDQGEGGDGATKPFIAFVLGGPGSGKGTQCVRIASDFGFAHLSAGDLLRSEIS 82

>sp|P20425|KCY_DICDI Cytidylate kinase (Deoxycytidylate kinase) (UMP-CMP kinase)
           gi|102207|pir||A35235 adenylate kinase (EC 2.7.4.3) -
           slime mold (Dictyostelium discoideum)
           gi|3212623|pdb|1UKE|  UmpCMP KINASE FROM SLIME MOLD
           gi|3212729|pdb|2UKD|  UmpCMP KINASE FROM SLIME MOLD
           COMPLEXED WITH ADP, CMP gi|3212820|pdb|3UKD|  UmpCMP
           KINASE FROM SLIME MOLD COMPLEXED WITH ADP, CMP, And Alf3
           gi|3212828|pdb|4UKD|  UmpCMP KINASE FROM SLIME MOLD
           COMPLEXED WITH ADP, UDP, Beryllium Fluoride
           gi|5822263|pdb|1QF9|A Chain A, Ph Influences Fluoride
           Coordination Number Of The Alfx Phosphoryl Transfer
           Transition State Analog In UmpCMP Kinase
           gi|5822578|pdb|5UKD|A Chain A, Ph Influences Fluoride
           Coordination Number Of The Alfx Phosphoryl Transfer
           Transition State Analog gi|167958|gb|AAA33272.1| UMP-CMP
           kinase
          Length = 194

 Score = 52.4 bits (124), Expect = 2e-06
 Identities = 23/39 (58%), Positives = 30/39 (75%)
 Frame = +1

Query: 262 AQKRVVYVVGGPGSGKGTQCDMLARDFGVPFFSAGELIR 378
           ++  VV+V+GGPGSGKGTQC  + RDFG    SAG+L+R
Sbjct: 4   SKPNVVFVLGGPGSGKGTQCANIVRDFGWVHLSAGDLLR 42

>ref|XP_318420.1| ENSANGP00000014384 [Anopheles gambiae] gi|21301494|gb|EAA13639.1|
           ENSANGP00000014384 [Anopheles gambiae str. PEST]
          Length = 280

 Score = 52.0 bits (123), Expect = 2e-06
 Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 12/105 (11%)
 Frame = +1

Query: 100 HHLYRGHSLLRRIPSD-------VRAAVTSRIVFPRASVVAQASPMATDAAPEAPTAQAG 258
           HHL RG  +   I          ++   +  ++  +  +   A P +       P    G
Sbjct: 20  HHLARGRFMTSVIARSTGSTLHHIKRCWSGSLIGGKQCIRPSALPQSVVRNGSVPVCPFG 79

Query: 259 S-----AQKRVVYVVGGPGSGKGTQCDMLARDFGVPFFSAGELIR 378
           +      + +VV+V+G PGSGKGTQC+ + ++FG    SAG+L+R
Sbjct: 80  TKFSVMGKPKVVFVLGPPGSGKGTQCEKIVKEFGYTHLSAGDLLR 124



EST assemble image


clone accession position
1 MXL036a02_r BP095111 1 391
2 MX066b04_r BP088666 41 357




Chlamydomonas reinhardtii
Kazusa DNA Research Institute