Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003389A_C01 KCC003389A_c01
(277 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_179430.1| ADP-ribosylation factor-like protein 2 (ARL2) [... 45 2e-04
ref|ZP_00139559.1| COG3200: 3-deoxy-D-arabino-heptulosonate 7-ph... 37 0.060
pdb|1KSJ|A Chain A, Complex Of Arl2 And Pde Delta, Crystal Form ... 36 0.18
pdb|1KSH|A Chain A, Complex Of Arl2 And Pde Delta, Crystal Form ... 36 0.18
pdb|1KSG|A Chain A, Complex Of Arl2 And Pde Delta, Crystal Form 1 36 0.18
>ref|NP_179430.1| ADP-ribosylation factor-like protein 2 (ARL2) [Arabidopsis
thaliana] gi|11131460|sp|Q9ZPX1|ARF5_ARATH Probable
ADP-ribosylation factor At2g18390
gi|25294168|pir||G84563 probable ADP-ribosylation factor
[imported] - Arabidopsis thaliana
gi|4309728|gb|AAD15498.1| putative ADP-ribosylation
factor [Arabidopsis thaliana] gi|14334672|gb|AAK59514.1|
putative ADP-ribosylation factor [Arabidopsis thaliana]
gi|17104667|gb|AAL34222.1| putative ADP-ribosylation
factor [Arabidopsis thaliana]
gi|20514265|gb|AAM22961.1|AF486852_1 ARL2 G-protein
[Arabidopsis thaliana] gi|21593903|gb|AAM65870.1|
putative ADP-ribosylation factor [Arabidopsis thaliana]
Length = 185
Score = 45.4 bits (106), Expect = 2e-04
Identities = 19/30 (63%), Positives = 25/30 (83%)
Frame = +2
Query: 5 RVVACSAVDGSGLLEGFDFVVHDISSRIYL 94
++V CSA G GLLEGFD++V DI+SRIY+
Sbjct: 154 KIVGCSAYTGEGLLEGFDWLVQDIASRIYM 183
>ref|ZP_00139559.1| COG3200: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP)
synthase [Pseudomonas aeruginosa UCBPP-PA14]
Length = 376
Score = 37.4 bits (85), Expect = 0.060
Identities = 26/70 (37%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Frame = -3
Query: 236 WEPPLSCTAPPST----TRPQ*CAFRFECGEMRKNADTLGEKR*WRCPATRTGKCGC*CR 69
W CTA PS+ TRP CA R++A WRCPA GC R
Sbjct: 297 WAEATRCTATPSSRPAATRPAWCAASPR--RWRRSA--------WRCPAPAAWPPGCTWR 346
Query: 68 APRSQSPPAA 39
PR+ SP A+
Sbjct: 347 PPRTTSPSAS 356
>pdb|1KSJ|A Chain A, Complex Of Arl2 And Pde Delta, Crystal Form 2 (Semet)
Length = 186
Score = 35.8 bits (81), Expect = 0.18
Identities = 15/29 (51%), Positives = 21/29 (71%)
Frame = +2
Query: 5 RVVACSAVDGSGLLEGFDFVVHDISSRIY 91
R+ CSAV G LL G D+++ DISSR++
Sbjct: 155 RIQGCSAVTGEDLLPGIDWLLDDISSRVF 183
>pdb|1KSH|A Chain A, Complex Of Arl2 And Pde Delta, Crystal Form 2 (Native)
Length = 186
Score = 35.8 bits (81), Expect = 0.18
Identities = 15/29 (51%), Positives = 21/29 (71%)
Frame = +2
Query: 5 RVVACSAVDGSGLLEGFDFVVHDISSRIY 91
R+ CSAV G LL G D+++ DISSR++
Sbjct: 155 RIQGCSAVTGEDLLPGIDWLLDDISSRVF 183
>pdb|1KSG|A Chain A, Complex Of Arl2 And Pde Delta, Crystal Form 1
Length = 186
Score = 35.8 bits (81), Expect = 0.18
Identities = 15/29 (51%), Positives = 21/29 (71%)
Frame = +2
Query: 5 RVVACSAVDGSGLLEGFDFVVHDISSRIY 91
R+ CSAV G LL G D+++ DISSR++
Sbjct: 155 RIQGCSAVTGEDLLPGIDWLLDDISSRVF 183
