Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003386A_C01 KCC003386A_c01
(334 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q01656|RSP4_CHLRE FLAGELLAR RADIAL SPOKE PROTEIN 4 gi|322384|... 96 3e-29
gb|AAC38955.1| radial spokehead [Strongylocentrotus purpuratus] 45 3e-04
dbj|BAC30192.1| unnamed protein product [Mus musculus] 45 3e-04
ref|XP_137041.2| similar to radial spokehead-like 1; ortholog of... 45 3e-04
ref|XP_228162.2| similar to radial spokehead-like 1 [Rattus norv... 44 6e-04
>sp|Q01656|RSP4_CHLRE FLAGELLAR RADIAL SPOKE PROTEIN 4 gi|322384|pir||A44498 radial spoke
protein 4 - Chlamydomonas reinhardtii
gi|167436|gb|AAA33092.1| flagellar radial spoke protein
Length = 465
Score = 95.9 bits (237), Expect(2) = 3e-29
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = +2
Query: 110 MAAVDSVAQALAYLQVHSPQDGTSMYDHLVKLVSKVLEDQPKNAVDLL 253
MAAVDSVAQALAYLQVHSPQDGTSMYDHLVKLVSKVLEDQPKNAVDLL
Sbjct: 1 MAAVDSVAQALAYLQVHSPQDGTSMYDHLVKLVSKVLEDQPKNAVDLL 48
Score = 53.1 bits (126), Expect(2) = 3e-29
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = +3
Query: 255 ETSLLAKKSTFDPKESSPLVPIPVAP 332
ETSLL KKSTFDPKESSPLVPIPVAP
Sbjct: 49 ETSLLVKKSTFDPKESSPLVPIPVAP 74
>gb|AAC38955.1| radial spokehead [Strongylocentrotus purpuratus]
Length = 552
Score = 45.1 bits (105), Expect = 3e-04
Identities = 19/47 (40%), Positives = 33/47 (69%)
Frame = +2
Query: 122 DSVAQALAYLQVHSPQDGTSMYDHLVKLVSKVLEDQPKNAVDLLRDI 262
+++ A AYL S + ++YDHL ++++KVL+++P+N VDL DI
Sbjct: 42 EALVNAKAYLLKASNKSNLNLYDHLSRILTKVLDERPENVVDLFEDI 88
>dbj|BAC30192.1| unnamed protein product [Mus musculus]
Length = 606
Score = 45.1 bits (105), Expect = 3e-04
Identities = 21/57 (36%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Frame = +2
Query: 95 SSLAAMAAVD-SVAQALAYLQVHSPQDGTSMYDHLVKLVSKVLEDQPKNAVDLLRDI 262
+S AA + ++ ++ A AYL S + G ++YDHL K+++K+L+++P +AVD++ +I
Sbjct: 88 ASEAAQSMLEVAIQNAKAYLLSTSSKSGLNLYDHLSKVLTKILDERPADAVDIIENI 144
>ref|XP_137041.2| similar to radial spokehead-like 1; ortholog of mouse radial
spokehead-like 1 [Homo sapiens] [Mus musculus]
Length = 436
Score = 44.7 bits (104), Expect = 3e-04
Identities = 18/46 (39%), Positives = 34/46 (73%)
Frame = +2
Query: 125 SVAQALAYLQVHSPQDGTSMYDHLVKLVSKVLEDQPKNAVDLLRDI 262
++ A AYL S + G ++YDHL K+++K+L+++P +AVD++ +I
Sbjct: 5 AIQNAKAYLLSTSSKSGLNLYDHLSKVLTKILDERPADAVDIIENI 50
>ref|XP_228162.2| similar to radial spokehead-like 1 [Rattus norvegicus]
Length = 794
Score = 43.9 bits (102), Expect = 6e-04
Identities = 19/46 (41%), Positives = 34/46 (73%)
Frame = +2
Query: 125 SVAQALAYLQVHSPQDGTSMYDHLVKLVSKVLEDQPKNAVDLLRDI 262
+V A AYL S + G ++YDHL K+++K+L+++P +AVD++ +I
Sbjct: 209 AVQNAKAYLLSTSSKSGLNLYDHLSKVLTKILDERPVDAVDVVENI 254
