KCC003384A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003384A_C01 KCC003384A_c01
ctcaacgtaaaaatCCAGCTGAAGCCCCGACAAGAGCCTTGTGAGCTTGCCCGCGCATGT
TCATGCACTGACATAAGATAACAGCAGCATACTAGTCGCTTTGAACAGAGCTTCAATCGT
GGGCATAGTTCTGCGTTTCGTAGCGAGCTCCAACTCGCCGGATGCTCTCCAACTTGCGAA
CTCTCGTCGTTTCGCCAAGGGGGCGTTGCTCCGTGCTCAGCACCTTAACCAGCTCCGTTC
GTGGTGGTACCGGCTTTCTGCCGGCACGCGCTCAGGACTCCCAACCGTTCCTCAGGCCGA
CAGCCATCGCGCGCGCCATGTCGTCAGCTGCCGATTCTGCTGTCCCCCGGGCCCTGGTCT
ACGACGCACCCGG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003384A_C01 KCC003384A_c01
         (373 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||D64889 probable phenylacetaldehyde dehydrogenase (EC 1.2.1....    36  0.12
ref|NP_415903.2| phenylacetaldehyde dehydrogenase [Escherichia c...    36  0.12
emb|CAA66106.1| phenylacetaldehyde dehydrogenase [Escherichia coli]    36  0.12
emb|CAA67780.1| phenylacetaldehyde dehydrogenase [Escherichia coli]    36  0.12
emb|CAD41609.1| OSJNBb0034G17.1 [Oryza sativa (japonica cultivar...    35  0.34

>pir||D64889 probable phenylacetaldehyde dehydrogenase (EC 1.2.1.39) -
           Escherichia coli (strain K-12)
           gi|1742261|dbj|BAA14992.1| Aldehyde dehydrogenase,
           mitochondrial 3 precursor (EC 1.2.1.3). [Escherichia
           coli] gi|1742265|dbj|BAA14995.1| Aldehyde dehydrogenase,
           mitochondrial 3 precursor (EC 1.2.1.3). [Escherichia
           coli] gi|1787650|gb|AAC74467.1| phenylacetaldehyde
           dehydrogenase [Escherichia coli K12]
          Length = 500

 Score = 36.2 bits (82), Expect = 0.12
 Identities = 21/63 (33%), Positives = 32/63 (50%)
 Frame = +2

Query: 80  NSSILVALNRASIVGIVLRFVASSNSPDALQLANSRRFAKGALLRAQHLNQLRSWWYRLS 259
           N    + L R  + G V+  V  ++  +ALQLAN   +   A +  Q+L+Q   +  RL 
Sbjct: 393 NPDAKLRLTREEVFGPVVNLVRVADGEEALQLANDTEYGLTASVWTQNLSQALEYSDRLQ 452

Query: 260 AGT 268
           AGT
Sbjct: 453 AGT 455

>ref|NP_415903.2| phenylacetaldehyde dehydrogenase [Escherichia coli K12]
           gi|2506352|sp|P80668|FEAB_ECOLI Phenylacetaldehyde
           dehydrogenase (PAD)
          Length = 499

 Score = 36.2 bits (82), Expect = 0.12
 Identities = 21/63 (33%), Positives = 32/63 (50%)
 Frame = +2

Query: 80  NSSILVALNRASIVGIVLRFVASSNSPDALQLANSRRFAKGALLRAQHLNQLRSWWYRLS 259
           N    + L R  + G V+  V  ++  +ALQLAN   +   A +  Q+L+Q   +  RL 
Sbjct: 392 NPDAKLRLTREEVFGPVVNLVRVADGEEALQLANDTEYGLTASVWTQNLSQALEYSDRLQ 451

Query: 260 AGT 268
           AGT
Sbjct: 452 AGT 454

>emb|CAA66106.1| phenylacetaldehyde dehydrogenase [Escherichia coli]
          Length = 499

 Score = 36.2 bits (82), Expect = 0.12
 Identities = 21/63 (33%), Positives = 32/63 (50%)
 Frame = +2

Query: 80  NSSILVALNRASIVGIVLRFVASSNSPDALQLANSRRFAKGALLRAQHLNQLRSWWYRLS 259
           N    + L R  + G V+  V  ++  +ALQLAN   +   A +  Q+L+Q   +  RL 
Sbjct: 392 NPDAKLRLTREEVFGPVVNLVRVADGEEALQLANDTEYGLTASVWTQNLSQALEYSDRLQ 451

Query: 260 AGT 268
           AGT
Sbjct: 452 AGT 454

>emb|CAA67780.1| phenylacetaldehyde dehydrogenase [Escherichia coli]
          Length = 491

 Score = 36.2 bits (82), Expect = 0.12
 Identities = 21/63 (33%), Positives = 32/63 (50%)
 Frame = +2

Query: 80  NSSILVALNRASIVGIVLRFVASSNSPDALQLANSRRFAKGALLRAQHLNQLRSWWYRLS 259
           N    + L R  + G V+  V  ++  +ALQLAN   +   A +  Q+L+Q   +  RL 
Sbjct: 392 NPDAKLRLTREEVFGPVVNLVRVADGEEALQLANDTEYGLTASVWTQNLSQALEYSDRLQ 451

Query: 260 AGT 268
           AGT
Sbjct: 452 AGT 454

>emb|CAD41609.1| OSJNBb0034G17.1 [Oryza sativa (japonica cultivar-group)]
           gi|32490157|emb|CAE05144.1| OSJNBa0065H10.15 [Oryza
           sativa (japonica cultivar-group)]
          Length = 343

 Score = 34.7 bits (78), Expect = 0.34
 Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 6/62 (9%)
 Frame = -3

Query: 257 KAGTTTNGAG*GAEHGATPPWRNDESSQVGEH-----PASWSSLRNAELCPRL-KLCSKR 96
           + G    GAG G E     PW  +E   + EH     P  WSS+R+  L PR  K C  R
Sbjct: 14  RRGAGGGGAGGGGEALRKGPWMAEEDEVLLEHVRTHGPMDWSSIRSKGLLPRTGKSCRLR 73

Query: 95  LV 90
            V
Sbjct: 74  WV 75



EST assemble image


clone accession position
1 MX051c07_r BP088091 1 369
2 MX203h04_r BP089257 15 373




Chlamydomonas reinhardtii
Kazusa DNA Research Institute