Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003383A_C01 KCC003383A_c01
(358 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_852136.1| replication factor C 2 (40kD) isoform 1; replic... 52 2e-06
gb|AAP36459.1| Homo sapiens replication factor C (activator 1) 2... 52 2e-06
ref|NP_002905.2| replication factor C 2 (40kD) isoform 2; replic... 52 2e-06
ref|XP_341063.1| replication factor C 2 (40kD) [Rattus norvegicu... 51 4e-06
ref|NP_064406.1| replication factor C (activator 1) 2; replicati... 51 4e-06
>ref|NP_852136.1| replication factor C 2 (40kD) isoform 1; replication factor C 40
kDa subunit [Homo sapiens]
gi|2507300|sp|P35250|RFC2_HUMAN Activator 1 40 kDa
subunit (Replication factor C 40 kDa subunit) (A1 40 kDa
subunit) (RF-C 40 kDa subunit) (RFC40)
gi|1590811|gb|AAB09786.1| replication factor C, 40-kDa
subunit [Homo sapiens] gi|2914760|gb|AAC04860.1|
replication factor C subunit 2 [Homo sapiens]
gi|30172692|gb|AAP22334.1| unknown [Homo sapiens]
Length = 354
Score = 52.0 bits (123), Expect = 2e-06
Identities = 25/48 (52%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Frame = +1
Query: 220 QPMDLDPKPPEETA--TKGGYELPWLEKYRPQFINEIVGNTEAVARLQ 357
+ D DP P A + G YELPW+EKYRP +NEIVGN + V+RL+
Sbjct: 14 EAQDSDPAPAFSKAPGSAGHYELPWVEKYRPVKLNEIVGNEDTVSRLE 61
>gb|AAP36459.1| Homo sapiens replication factor C (activator 1) 2, 40kDa [synthetic
construct]
Length = 321
Score = 52.0 bits (123), Expect = 2e-06
Identities = 25/48 (52%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Frame = +1
Query: 220 QPMDLDPKPPEETA--TKGGYELPWLEKYRPQFINEIVGNTEAVARLQ 357
+ D DP P A + G YELPW+EKYRP +NEIVGN + V+RL+
Sbjct: 14 EAQDSDPAPAFSKAPGSAGHYELPWVEKYRPVKLNEIVGNEDTVSRLE 61
>ref|NP_002905.2| replication factor C 2 (40kD) isoform 2; replication factor C 40
kDa subunit [Homo sapiens] gi|12803933|gb|AAH02813.1|
Replication factor C 2 (40kD), isoform 2 [Homo sapiens]
gi|18921085|gb|AAL82503.1|AF483622_1 replication factor
C (activator 1) 2 (40kD) [Homo sapiens]
gi|30172693|gb|AAP22335.1| unknown [Homo sapiens]
gi|30582955|gb|AAP35707.1| replication factor C
(activator 1) 2, 40kDa [Homo sapiens]
Length = 320
Score = 52.0 bits (123), Expect = 2e-06
Identities = 25/48 (52%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Frame = +1
Query: 220 QPMDLDPKPPEETA--TKGGYELPWLEKYRPQFINEIVGNTEAVARLQ 357
+ D DP P A + G YELPW+EKYRP +NEIVGN + V+RL+
Sbjct: 14 EAQDSDPAPAFSKAPGSAGHYELPWVEKYRPVKLNEIVGNEDTVSRLE 61
>ref|XP_341063.1| replication factor C 2 (40kD) [Rattus norvegicus]
gi|34873324|ref|XP_347154.1| similar to replication
factor C, 40kDa subunit [Rattus norvegicus]
Length = 349
Score = 51.2 bits (121), Expect = 4e-06
Identities = 22/37 (59%), Positives = 28/37 (75%)
Frame = +1
Query: 247 PEETATKGGYELPWLEKYRPQFINEIVGNTEAVARLQ 357
P + T G YELPW+EKYRP +NEIVGN + V+RL+
Sbjct: 20 PVPSKTTGHYELPWVEKYRPVKLNEIVGNEDTVSRLE 56
>ref|NP_064406.1| replication factor C (activator 1) 2; replication factor C 2 (40kD)
[Mus musculus] gi|23813636|sp|Q9WUK4|RFC2_MOUSE
Activator 1 40 kDa subunit (Replication factor C 40 kDa
subunit) (A1 40 kDa subunit) (RF-C 40 kDa subunit)
(RFC40) gi|4972952|gb|AAD34861.1|AF139987_4 replication
factor C, 40kDa subunit [Mus musculus]
gi|9800515|gb|AAF99332.1|AF289664_3 RFC2 [Mus musculus]
gi|18606185|gb|AAH23028.1| Replication factor C
(activator 1) 2 [Mus musculus]
gi|26344918|dbj|BAC36108.1| unnamed protein product [Mus
musculus]
Length = 349
Score = 51.2 bits (121), Expect = 4e-06
Identities = 22/37 (59%), Positives = 28/37 (75%)
Frame = +1
Query: 247 PEETATKGGYELPWLEKYRPQFINEIVGNTEAVARLQ 357
P + T G YELPW+EKYRP +NEIVGN + V+RL+
Sbjct: 20 PVPSKTAGHYELPWVEKYRPLKLNEIVGNEDTVSRLE 56
