KCC003377A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003377A_C01 KCC003377A_c01
aAACGAAGAGAACCGCTCTATCCTAAAGACATTTGCATAGCGCCACTTGCAATCTTGTGT
TGCGCTGCGGTTTTCTAATAGCTACCCACGTAATCTAGCCACACAAAGCGCTTCTTAGGC
TTCAGTGCACATAACCTAGCTCAAGGGCGGTCGCAGGGCTCAGACACGCAAGGACTGCAC
ACGCACGCCAGGCGCACGTACGCCTCACGCACCTTGCAGCTCTCTTGCCCGCCGCCATGA
AGATCTACACGCGATCTGGGGATGCGGGTCAGGCCTCACTGTTCAATGGCGAGCGGCTGT
ACAAGGACGACGACGTGTTTCAGGCGCTTGGCGACGTGGACGAGCTGAACTCGGCGCTGG
GGGTGGCGTCGGCTTTCATCACAAACACAAAAATGCTGGAGCAGCTGGAGACAATCCAGT
CGCGGCTGATCGACGTGGGCAGTGCGGTGGACAACCCCCTACCCACCAGCGATGAGGACA
AGCTGCAGCGCACGCACTTCGCGGGGAAGGAGCACAACGAGCAACTGGAGTGCTGGATTG
ACGCCATGGATGAG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003377A_C01 KCC003377A_c01
         (554 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAH05054.1|AAH05054 Unknown (protein for IMAGE:2822202) [Homo...    80  1e-14
ref|NP_443077.1| cob(I)alamin adenosyltransferase; ATP:Cob(I)ala...    80  1e-14
ref|NP_084232.1| methylmalonic aciduria (cobalamin deficiency) t...    80  2e-14
dbj|BAC28659.1| unnamed protein product [Mus musculus]                 80  2e-14
gb|AAH22159.1| Mmab protein [Mus musculus]                             80  2e-14

>gb|AAH05054.1|AAH05054 Unknown (protein for IMAGE:2822202) [Homo sapiens]
          Length = 254

 Score = 80.5 bits (197), Expect = 1e-14
 Identities = 49/107 (45%), Positives = 63/107 (58%), Gaps = 2/107 (1%)
 Frame = +3

Query: 228 PAAMKIYTRSGDAGQASLFNGERLYKDDDVFQALGDVDELNSALGVASAFITNT--KMLE 401
           P   KIYT++GD G +S F GER  KDD VF+A+G  DEL+SA+G A   +T       E
Sbjct: 57  PRIPKIYTKTGDKGFSSTFTGERRPKDDQVFEAVGTTDELSSAIGFALELVTEKGHTFAE 116

Query: 402 QLETIQSRLIDVGSAVDNPLPTSDEDKLQRTHFAGKEHNEQLECWID 542
           +L+ IQ  L DVGSA+  P  ++ E  L+ T F      E LE WID
Sbjct: 117 ELQKIQCTLQDVGSALATPCSSAREAHLKYTTFKAGPILE-LEQWID 162

>ref|NP_443077.1| cob(I)alamin adenosyltransferase; ATP:Cob(I)alamin
           Adenosyltransferase [Homo sapiens]
           gi|15080110|gb|AAH11831.1|AAH11831 Unknown (protein for
           MGC:20496) [Homo sapiens] gi|26284726|gb|AAN85091.1|
           cob(I)alamin adenosyltransferase [Homo sapiens]
          Length = 250

 Score = 80.5 bits (197), Expect = 1e-14
 Identities = 49/107 (45%), Positives = 63/107 (58%), Gaps = 2/107 (1%)
 Frame = +3

Query: 228 PAAMKIYTRSGDAGQASLFNGERLYKDDDVFQALGDVDELNSALGVASAFITNT--KMLE 401
           P   KIYT++GD G +S F GER  KDD VF+A+G  DEL+SA+G A   +T       E
Sbjct: 53  PRIPKIYTKTGDKGFSSTFTGERRPKDDQVFEAVGTTDELSSAIGFALELVTEKGHTFAE 112

Query: 402 QLETIQSRLIDVGSAVDNPLPTSDEDKLQRTHFAGKEHNEQLECWID 542
           +L+ IQ  L DVGSA+  P  ++ E  L+ T F      E LE WID
Sbjct: 113 ELQKIQCTLQDVGSALATPCSSAREAHLKYTTFKAGPILE-LEQWID 158

>ref|NP_084232.1| methylmalonic aciduria (cobalamin deficiency) type B homolog;
           ATP:Cob(I)alamin Adenosyltransferase [Mus musculus]
           gi|12860826|dbj|BAB32055.1| unnamed protein product [Mus
           musculus] gi|26353882|dbj|BAC40571.1| unnamed protein
           product [Mus musculus] gi|35505368|gb|AAH57558.1|
           Methylmalonic aciduria (cobalamin deficiency) type B
           homolog [Mus musculus]
          Length = 237

 Score = 79.7 bits (195), Expect = 2e-14
 Identities = 51/111 (45%), Positives = 66/111 (58%), Gaps = 2/111 (1%)
 Frame = +3

Query: 216 AALLPAAMKIYTRSGDAGQASLFNGERLYKDDDVFQALGDVDELNSALGVASAFITNT-- 389
           AA +P   KIYT++GD G +S F GER  KDD VF+A+G  DEL+SA+G A   +T    
Sbjct: 46  AAKIP---KIYTKTGDKGFSSTFTGERRPKDDQVFEAVGTTDELSSAIGFAMELVTEKGH 102

Query: 390 KMLEQLETIQSRLIDVGSAVDNPLPTSDEDKLQRTHFAGKEHNEQLECWID 542
              E+L+ IQ  L DVGSA+  P  ++ E  L+ T F      E LE WID
Sbjct: 103 MFAEELQKIQCMLQDVGSALATPRSSAREAHLKHTAFQEGPVLE-LERWID 152

>dbj|BAC28659.1| unnamed protein product [Mus musculus]
          Length = 257

 Score = 79.7 bits (195), Expect = 2e-14
 Identities = 51/111 (45%), Positives = 66/111 (58%), Gaps = 2/111 (1%)
 Frame = +3

Query: 216 AALLPAAMKIYTRSGDAGQASLFNGERLYKDDDVFQALGDVDELNSALGVASAFITNT-- 389
           AA +P   KIYT++GD G +S F GER  KDD VF+A+G  DEL+SA+G A   +T    
Sbjct: 46  AAKIP---KIYTKTGDKGFSSTFTGERRPKDDQVFEAVGTTDELSSAIGFAMELVTEKGH 102

Query: 390 KMLEQLETIQSRLIDVGSAVDNPLPTSDEDKLQRTHFAGKEHNEQLECWID 542
              E+L+ IQ  L DVGSA+  P  ++ E  L+ T F      E LE WID
Sbjct: 103 MFAEELQKIQCMLQDVGSALATPRSSAREAHLKHTAFQEGPVLE-LERWID 152

>gb|AAH22159.1| Mmab protein [Mus musculus]
          Length = 233

 Score = 79.7 bits (195), Expect = 2e-14
 Identities = 51/111 (45%), Positives = 66/111 (58%), Gaps = 2/111 (1%)
 Frame = +3

Query: 216 AALLPAAMKIYTRSGDAGQASLFNGERLYKDDDVFQALGDVDELNSALGVASAFITNT-- 389
           AA +P   KIYT++GD G +S F GER  KDD VF+A+G  DEL+SA+G A   +T    
Sbjct: 42  AAKIP---KIYTKTGDKGFSSTFTGERRPKDDQVFEAVGTTDELSSAIGFAMELVTEKGH 98

Query: 390 KMLEQLETIQSRLIDVGSAVDNPLPTSDEDKLQRTHFAGKEHNEQLECWID 542
              E+L+ IQ  L DVGSA+  P  ++ E  L+ T F      E LE WID
Sbjct: 99  MFAEELQKIQCMLQDVGSALATPRSSAREAHLKHTAFQEGPVLE-LERWID 148



EST assemble image


clone accession position
1 MX044h09_r BP087851 1 336
2 MX047a09_r BP087926 2 458
3 MX038c03_r BP087589 12 374
4 MX256h05_r BP092627 43 554




Chlamydomonas reinhardtii
Kazusa DNA Research Institute