KCC003374A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003374A_C01 KCC003374A_c01
CTGGAGTGTGTACTGCCCCCTGGTGCTGTGCACTGCAAGAAAGCTGGAGCCCATCTACAA
GAAGCTGGCCAAGCGCTTTAAGAAGGTGGATTCCGTCATCATCGCCAAGATGGATGGCAC
TGAGAACGAGCACCCCGAGATCGAGGTCAAGGGCTTCCCTACCATCCTGTTCTATCCCGC
CGGCAGCGACCGCACCCCCATCGTGTTCGAGGGCGGCGACCGCTCGCTCAAGTCCCTGAC
CAAGTTCATCAAGACCAACGCCAAGATCCCGTACGAGCTGCCCAAGAAGGGCTCCGACGG
CGACGAGGGCACCTCGGACGACAAGGACAAGCCCGCGTCCGACAAGGACGAGCTGTAAGC
GGCTATCTGAACTACCCCAGGTTTGGAGCGTCTGCTTGCGCGCTTGTGCTTGCACACTGT
GCATGGATGGGAGTTAAGGAGGAGACGGAGCACGGAGGCTGCGCTCGGTTGGTGGCTTGG
AGCACCGGCAGCGCGTGATCCGTCCT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003374A_C01 KCC003374A_c01
         (506 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||T07927 protein disulfide-isomerase (EC 5.3.4.1) RB60 - Chla...   215  3e-55
gb|AAD55566.1|AF110784_1 protein disulfide isomerase precursor [...   155  2e-37
gb|AAO26314.1| protein disulphide isomerase [Elaeis guineensis]        94  1e-18
ref|NP_191056.2| protein disulfide isomerase family [Arabidopsis...    92  3e-18
pir||T06724 protein disulfide-isomerase homolog F28P10.60 - Arab...    92  3e-18

>pir||T07927 protein disulfide-isomerase (EC 5.3.4.1) RB60 - Chlamydomonas
           reinhardtii gi|2708314|gb|AAC49896.1| protein disulfide
           isomerase RB60 [Chlamydomonas reinhardtii]
           gi|4104541|gb|AAD02069.1| protein disulfide isomerase
           [Chlamydomonas reinhardtii]
          Length = 532

 Score =  215 bits (547), Expect = 3e-55
 Identities = 105/106 (99%), Positives = 106/106 (99%)
 Frame = +2

Query: 38  RKLEPIYKKLAKRFKKVDSVIIAKMDGTENEHPEIEVKGFPTILFYPAGSDRTPIVFEGG 217
           +KLEPIYKKLAKRFKKVDSVIIAKMDGTENEHPEIEVKGFPTILFYPAGSDRTPIVFEGG
Sbjct: 427 KKLEPIYKKLAKRFKKVDSVIIAKMDGTENEHPEIEVKGFPTILFYPAGSDRTPIVFEGG 486

Query: 218 DRSLKSLTKFIKTNAKIPYELPKKGSDGDEGTSDDKDKPASDKDEL 355
           DRSLKSLTKFIKTNAKIPYELPKKGSDGDEGTSDDKDKPASDKDEL
Sbjct: 487 DRSLKSLTKFIKTNAKIPYELPKKGSDGDEGTSDDKDKPASDKDEL 532

>gb|AAD55566.1|AF110784_1 protein disulfide isomerase precursor [Volvox carteri f.
           nagariensis]
          Length = 524

 Score =  155 bits (393), Expect = 2e-37
 Identities = 77/106 (72%), Positives = 89/106 (83%)
 Frame = +2

Query: 38  RKLEPIYKKLAKRFKKVDSVIIAKMDGTENEHPEIEVKGFPTILFYPAGSDRTPIVFEGG 217
           +KL+PIYKKLAKRFKKV SV+IAKMDGTENEHP ++VKGFPT++F+PAG D TPI FEGG
Sbjct: 423 KKLDPIYKKLAKRFKKVSSVVIAKMDGTENEHPLVDVKGFPTLIFFPAGEDATPIPFEGG 482

Query: 218 DRSLKSLTKFIKTNAKIPYELPKKGSDGDEGTSDDKDKPASDKDEL 355
           DR+LKSLTKFIK NAK+PYELPKK S  +E  +DD     S KDEL
Sbjct: 483 DRTLKSLTKFIKANAKVPYELPKK-SSAEESAADD---APSAKDEL 524

>gb|AAO26314.1| protein disulphide isomerase [Elaeis guineensis]
          Length = 447

 Score = 94.0 bits (232), Expect = 1e-18
 Identities = 45/101 (44%), Positives = 64/101 (62%)
 Frame = +2

Query: 44  LEPIYKKLAKRFKKVDSVIIAKMDGTENEHPEIEVKGFPTILFYPAGSDRTPIVFEGGDR 223
           LEP Y KLAK  + ++S++IAKMDGT NEHP  +V GFPT+LF+PAG+     V    DR
Sbjct: 337 LEPTYNKLAKHLRGIESLVIAKMDGTSNEHPRAKVDGFPTLLFFPAGNKSFDPVTVDTDR 396

Query: 224 SLKSLTKFIKTNAKIPYELPKKGSDGDEGTSDDKDKPASDK 346
           ++ +  KFIK +A IP++L +  S     ++ D   P  +K
Sbjct: 397 TVVAFYKFIKKHAAIPFKLQRPASAAKTDSATDGSAPVGEK 437

 Score = 32.0 bits (71), Expect = 4.5
 Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
 Frame = +2

Query: 89  DSVIIAKMDGTENEH--PEIEVKGFPTILFYPAG 184
           + V +AK+D TE      + EV+GFPT+LF+  G
Sbjct: 12  EDVALAKVDATEENELAQKYEVQGFPTVLFFVDG 45

>ref|NP_191056.2| protein disulfide isomerase family [Arabidopsis thaliana]
           gi|18072841|emb|CAC81067.1| ERp72 [Arabidopsis thaliana]
           gi|20260432|gb|AAM13114.1| protein
           disulfide-isomerase-like protein [Arabidopsis thaliana]
           gi|23197928|gb|AAN15491.1| protein
           disulfide-isomerase-like protein [Arabidopsis thaliana]
          Length = 579

 Score = 92.4 bits (228), Expect = 3e-18
 Identities = 48/109 (44%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
 Frame = +2

Query: 38  RKLEPIYKKLAKRFKKVDSVIIAKMDGTENEHPEIEVKGFPTILFYPAGSDRTPIVFEGG 217
           +  EPIY KL K  K +DS+++AKMDGT NEHP  +  GFPTILF+P G+     +    
Sbjct: 471 QSFEPIYNKLGKYLKGIDSLVVAKMDGTSNEHPRAKADGFPTILFFPGGNKSFDPIAVDV 530

Query: 218 DRSLKSLTKFIKTNAKIPYELPKKGSDG---DEGTSDDKDKPASDKDEL 355
           DR++  L KF+K +A IP++L K  +         SD+K +  S KDEL
Sbjct: 531 DRTVVELYKFLKKHASIPFKLEKPATPEPVISTMKSDEKIEGDSSKDEL 579

>pir||T06724 protein disulfide-isomerase homolog F28P10.60 - Arabidopsis
           thaliana gi|4678297|emb|CAB41088.1| protein
           disulfide-isomerase-like protein [Arabidopsis thaliana]
          Length = 566

 Score = 92.4 bits (228), Expect = 3e-18
 Identities = 48/109 (44%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
 Frame = +2

Query: 38  RKLEPIYKKLAKRFKKVDSVIIAKMDGTENEHPEIEVKGFPTILFYPAGSDRTPIVFEGG 217
           +  EPIY KL K  K +DS+++AKMDGT NEHP  +  GFPTILF+P G+     +    
Sbjct: 458 QSFEPIYNKLGKYLKGIDSLVVAKMDGTSNEHPRAKADGFPTILFFPGGNKSFDPIAVDV 517

Query: 218 DRSLKSLTKFIKTNAKIPYELPKKGSDG---DEGTSDDKDKPASDKDEL 355
           DR++  L KF+K +A IP++L K  +         SD+K +  S KDEL
Sbjct: 518 DRTVVELYKFLKKHASIPFKLEKPATPEPVISTMKSDEKIEGDSSKDEL 566



EST assemble image


clone accession position
1 MX258g06_r BP092761 1 468
2 MX041d10_r BP087687 133 559
3 MX036d07_r BP087525 252 613




Chlamydomonas reinhardtii
Kazusa DNA Research Institute