>KCC003373A_C01 KCC003373A_c01
acCACATCGTCCATCGTTGGCGCCCCTACATCTTATAACTAGTCCCTCCTCTACCATCTA
AGACTTAGTACTCACTACACGCGGCTTGGACCATAAAGCTGCTTCTGTAAAGCACGACTT
CTTCTTCCGGCCTATAAGCAAGGAACCGCCAGCCATGGAGACCGCCGCCAACCGCGTTGC
GTCGCTGGTCCTCAAGAAGAAGGATAGCCTGAAGGAGATGTCGGCCCAGCTCGGCAGCCT
GGCTGCGTCGTGGCACCGCCTGGGCGCTCTGCGTGAGCGCCGCATGACCATGGGCGGCGC
TCCCGAGGGGCCCACCACCACCACCCCCGCCGCGCCCTCTCCGATGGTCATGTCGC

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003373A_C01 KCC003373A_c01
         (356 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_824612.1| hypothetical protein [Streptomyces avermitilis ...    37  0.054
pir||A61183 hypothetical protein (sdsB region) - Pseudomonas sp        37  0.070
gb|AAH38446.1| SF1 protein [Homo sapiens]                              37  0.092
ref|ZP_00023375.1| hypothetical protein [Ralstonia metallidurans]      36  0.16
sp|P79772|FXD3_CHICK FORKHEAD BOX PROTEIN D3 (HNF3/FH TRANSCRIPT...    36  0.16

>ref|NP_824612.1| hypothetical protein [Streptomyces avermitilis MA-4680]
           gi|29607088|dbj|BAC71147.1| hypothetical protein
           [Streptomyces avermitilis MA-4680]
          Length = 412

 Score = 37.4 bits (85), Expect = 0.054
 Identities = 29/80 (36%), Positives = 32/80 (39%), Gaps = 13/80 (16%)
 Frame = +3

Query: 150 QPWRPPPTALRRWSSRRRIA*RRCRPSSAA---WLRRGTA-----WALCVSAA*PW---- 293
           +PW  PPT    WSS          PS +A   W     A     WA    A  PW    
Sbjct: 95  EPWAAPPTPEEPWSSP---------PSPSAEEPWSSPAPAPPEEPWAAPPPAEEPWSPPP 145

Query: 294 -AALPRGPPPPPPPRPLRWS 350
            A+ P   PPPPPP P  WS
Sbjct: 146 SASTPWSSPPPPPP-PDSWS 164

>pir||A61183 hypothetical protein (sdsB region) - Pseudomonas sp
          Length = 312

 Score = 37.0 bits (84), Expect = 0.070
 Identities = 23/52 (44%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
 Frame = -1

Query: 311 APRERRPWS--CGAHAERPGGATTQPGCRAGPTSPSGYPSS*GPATQRGWRR 162
           AP  RRP +  CG  A +PG   T PGCR  P  P G P +   A +RG  R
Sbjct: 75  APAGRRPRAAQCGLPAGQPGQRRTAPGCRPLPRRPPGAPGA--GALRRGTPR 124

>gb|AAH38446.1| SF1 protein [Homo sapiens]
          Length = 673

 Score = 36.6 bits (83), Expect = 0.092
 Identities = 15/22 (68%), Positives = 18/22 (81%)
 Frame = +3

Query: 273 VSAA*PWAALPRGPPPPPPPRP 338
           ++AA P+AALP  PPPPPPP P
Sbjct: 59  LTAAFPFAALPPPPPPPPPPPP 80

>ref|ZP_00023375.1| hypothetical protein [Ralstonia metallidurans]
          Length = 263

 Score = 35.8 bits (81), Expect = 0.16
 Identities = 27/64 (42%), Positives = 32/64 (49%), Gaps = 3/64 (4%)
 Frame = -2

Query: 334 RGGGGGGGPLGSAAHGHAALTQS--AQAVPRRSQAAELGRHLLQAI-LLLEDQRRNAVGG 164
           RG GGGG    + A GHA +  +  A A+PR   AA L  H LQA+   L       VG 
Sbjct: 149 RGSGGGGA--AAPARGHALVRDAALAHAMPRPPPAALLELHTLQALDATLAGASLREVGE 206

Query: 163 GLHG 152
           GL G
Sbjct: 207 GLFG 210

>sp|P79772|FXD3_CHICK FORKHEAD BOX PROTEIN D3 (HNF3/FH TRANSCRIPTION FACTOR GENESIS)
           (WINGED HELIX PROTEIN CWH-3) gi|1766077|gb|AAC60066.1|
           winged helix protein CWH-3 [Gallus gallus]
          Length = 394

 Score = 35.8 bits (81), Expect = 0.16
 Identities = 17/38 (44%), Positives = 23/38 (59%)
 Frame = -2

Query: 355 RHDHRRGRGGGGGGGPLGSAAHGHAALTQSAQAVPRRS 242
           R +  RG GGGGGGG  G++  G AA   + Q+ P+ S
Sbjct: 77  RPEGGRGGGGGGGGGEEGASGGGAAAAAAAGQSKPKSS 114

EST assemble image

clone accession position 1 MX033a12_r BP087365 1 353 2 MX238a03_r BP091389 3 261 3 MX028b01_r BP087203 5 313 4 MX246g01_r BP091938 9 309 5 MX060f02_r BP088441 81 356

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