KCC003372A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003372A_C01 KCC003372A_c01
cccaacatggccaacatgatgaaggcgatgcaggaccccgactacaagaccaaggtggag
gactgcgctcaaggtggctcAAGGATGACCCCGAGCTCAAGCCCATCCTGGAGGAGCTGG
AGAGCCAGGGCCCCGCAGCCATGATGAAGATTGTGGAACAACCCCGAGGTGCTTGGCAAG
CTGGGCAAGGCCATGGGCGGCGTGTTCGACTTTGAGGGCGCGCTGGAGGCGGGCGAGGCC
GGCGAGGGCGAGGAGGAGGAGGACGGCGAGGTGGAGGAGACCGTGCACGGAGCGGCCAGC
GCCGGCGACGTGGAGCT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003372A_C01 KCC003372A_c01
         (317 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAO32623.1| CR074 protein [Chlamydomonas reinhardtii]              156  6e-38
gb|AAO91862.1| TGB12K interacting protein 3 [Nicotiana tabacum]        68  4e-11
gb|AAO91861.1| TGB12K interacting protein 2 [Nicotiana tabacum]        66  1e-10
gb|AAN63819.1| ankyrin domain protein [Nicotiana tabacum]              62  2e-09
gb|AAK18619.1|AF352797_1 ankyrin-repeat protein HBP1 [Nicotiana ...    62  2e-09

>gb|AAO32623.1| CR074 protein [Chlamydomonas reinhardtii]
          Length = 368

 Score =  156 bits (395), Expect = 6e-38
 Identities = 79/105 (75%), Positives = 85/105 (80%)
 Frame = +1

Query: 1   PNMANMMKAMQDPDYKTKVEDCAQGGSRMTPSSSPSWRSWRARAPQP**RLWNNPEVLGK 180
           PNMANMMKAMQDPDYKTKVED  +G  +  P   P      ++ P    ++WNNPEVLGK
Sbjct: 148 PNMANMMKAMQDPDYKTKVEDALKG-LKDDPELKPILEELESQGPAAMMKMWNNPEVLGK 206

Query: 181 LGKAMGGVFDFEGALEAGEAGEGEEEEDGEVEETVHGAASAGDVE 315
           LGKAMGGVFDFEGALEAGEAGEGEEEEDGEVEETVHGAASAGDVE
Sbjct: 207 LGKAMGGVFDFEGALEAGEAGEGEEEEDGEVEETVHGAASAGDVE 251

>gb|AAO91862.1| TGB12K interacting protein 3 [Nicotiana tabacum]
          Length = 348

 Score = 67.8 bits (164), Expect = 4e-11
 Identities = 39/105 (37%), Positives = 55/105 (52%)
 Frame = +1

Query: 1   PNMANMMKAMQDPDYKTKVEDCAQGGSRMTPSSSPSWRSWRARAPQP**RLWNNPEVLGK 180
           P+M++M++ + +P  K ++E+      +  PS  P      +  P    R WN+ +VL K
Sbjct: 135 PSMSSMLENLTNPSQKNQIEE-RMARIKEDPSLKPILEEIESGGPAAMMRYWNDQDVLKK 193

Query: 181 LGKAMGGVFDFEGALEAGEAGEGEEEEDGEVEETVHGAASAGDVE 315
           LG+AMG     EGA  AG +G  E EE  E E  VH  AS GD E
Sbjct: 194 LGEAMGFAVAGEGATSAGVSGPDETEEANEDESVVHQCASVGDAE 238

>gb|AAO91861.1| TGB12K interacting protein 2 [Nicotiana tabacum]
          Length = 349

 Score = 65.9 bits (159), Expect = 1e-10
 Identities = 38/105 (36%), Positives = 54/105 (51%)
 Frame = +1

Query: 1   PNMANMMKAMQDPDYKTKVEDCAQGGSRMTPSSSPSWRSWRARAPQP**RLWNNPEVLGK 180
           P+M+ M++ + +P  K ++E+      +  PS  P      +  P    R WN+ +VL K
Sbjct: 136 PSMSGMLENLTNPSQKNQIEE-RMARIKEDPSLKPILEEIESGGPAAMMRYWNDQDVLKK 194

Query: 181 LGKAMGGVFDFEGALEAGEAGEGEEEEDGEVEETVHGAASAGDVE 315
           LG+AMG     EGA  AG +G  E E+  E E  VH  AS GD E
Sbjct: 195 LGEAMGFAVVGEGATSAGVSGTDETEDANEDESVVHQCASVGDAE 239

>gb|AAN63819.1| ankyrin domain protein [Nicotiana tabacum]
          Length = 350

 Score = 62.0 bits (149), Expect = 2e-09
 Identities = 36/105 (34%), Positives = 52/105 (49%)
 Frame = +1

Query: 1   PNMANMMKAMQDPDYKTKVEDCAQGGSRMTPSSSPSWRSWRARAPQP**RLWNNPEVLGK 180
           P+M+ M++++ +P  K ++E+      +  PS  P      +  P    R WN+ E L K
Sbjct: 137 PSMSGMLESLSNPAQKEQIEE-RMARIKEDPSLKPILEEIESGGPAAMMRYWNDQETLKK 195

Query: 181 LGKAMGGVFDFEGALEAGEAGEGEEEEDGEVEETVHGAASAGDVE 315
           +G+AMG     EGA  +   G  E EE  E E  VH  AS GD E
Sbjct: 196 IGEAMGFAAGGEGATSSAIPGTDETEEASEDESVVHQCASVGDAE 240

>gb|AAK18619.1|AF352797_1 ankyrin-repeat protein HBP1 [Nicotiana tabacum]
          Length = 350

 Score = 62.0 bits (149), Expect = 2e-09
 Identities = 36/105 (34%), Positives = 52/105 (49%)
 Frame = +1

Query: 1   PNMANMMKAMQDPDYKTKVEDCAQGGSRMTPSSSPSWRSWRARAPQP**RLWNNPEVLGK 180
           P+M+ M++++ +P  K ++E+      +  PS  P      +  P    R WN+ E L K
Sbjct: 137 PSMSGMLESLSNPAQKEQIEE-RMARIKEDPSLKPILEEIESGGPAAMMRYWNDQETLKK 195

Query: 181 LGKAMGGVFDFEGALEAGEAGEGEEEEDGEVEETVHGAASAGDVE 315
           +G+AMG     EGA  +   G  E EE  E E  VH  AS GD E
Sbjct: 196 IGEAMGFAAGGEGATSSAIPGTDETEEANEDESVVHQCASVGDAE 240



EST assemble image


clone accession position
1 MX025a02_r BP087092 1 199
2 MX049h08_r BP088037 96 317




Chlamydomonas reinhardtii
Kazusa DNA Research Institute