KCC003371A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003371A_C01 KCC003371A_c01
caagaatattataCAGCGACTCGTCTACTAGCCCTCTCTCAGCTATTGTAGGACGTGAAA
CCCCTCAGACCAAAAGCGCCCTCGCGACCATTACTGATACTTCTCTGGCATTGAAGGCAA
AGCTATTTTAAGGGCGAAATCAAGGTTTAGCGCTCGCGTGTAGCAGGGATTGGCGTGGAA
GTGGCGATGCGTCGACCCGCTACGACCCCAGATGAGGAGGAGAGCGAGCATTTGCTAGCA
GTCGGCCGAGAGCAGCAGCAGCCTGCTGGCGCTGCTGGCGTGTCAGCAAATGCGACCCCA
GCAACGACCCAGCAGAATGAGCAGAAATCGCAGGGACACAGTGTGGTGGTTATACCTACA
ATGGCGAGCGGTCAAGCGGGCGGGGACCTGGAGAGCGCACGGCGAGGAAGCGATGCCGGG
AGCAGCGCTGGCTCCACCAGCCAAAAGGGCAAGGACGCTGATGCTGGACAATGCCGTATT
TGCTTGG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003371A_C01 KCC003371A_c01
         (487 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|XP_325541.1| hypothetical protein [Neurospora crassa] gi|289...    43  0.002
ref|XP_172931.3| hypothetical protein XP_172931 [Homo sapiens]         31  0.024
ref|NP_626397.1| putative small secreted hydrophilic protein [St...    39  0.043
gb|AAH44363.1| Unknown (protein for MGC:55303) [Danio rerio]           37  0.13
ref|XP_317815.1| ENSANGP00000004820 [Anopheles gambiae] gi|21300...    36  0.21

>ref|XP_325541.1| hypothetical protein [Neurospora crassa] gi|28924698|gb|EAA33812.1|
           hypothetical protein [Neurospora crassa]
          Length = 477

 Score = 42.7 bits (99), Expect = 0.002
 Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
 Frame = +1

Query: 259 QPAGAAGVSANATPA-----TTQQNEQKSQGHSVVVIPTMASGQAGGDLESARRGSDAGS 423
           +P+G  G SA+AT A     T+  N     G +   +P   SG   G   S+  GSD GS
Sbjct: 351 KPSGTKGGSASATKAGGSKGTSAPNSIPGAGAAPNQVPGGGSGSVSGGSGSSSSGSDGGS 410

Query: 424 SAGSTSQKGKDADAGQC 474
           SAG  S  G  + +  C
Sbjct: 411 SAGGDSGSGASSGSSAC 427

>ref|XP_172931.3| hypothetical protein XP_172931 [Homo sapiens]
          Length = 286

 Score = 30.8 bits (68), Expect(2) = 0.024
 Identities = 20/73 (27%), Positives = 30/73 (40%)
 Frame = +1

Query: 244 GREQQQPAGAAGVSANATPATTQQNEQKSQGHSVVVIPTMASGQAGGDLESARRGSDAGS 423
           GR + Q AGA G           + E + Q       P++ +   GG  ESA+RG    +
Sbjct: 115 GRRRPQSAGAGGARPQDARGWVGRREGRQQARGC--FPSVRTAGPGGHFESAKRGGKMAA 172

Query: 424 SAGSTSQKGKDAD 462
            A   S +   A+
Sbjct: 173 WAPGRSPRQGPAE 185

 Score = 27.7 bits (60), Expect(2) = 0.024
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +2

Query: 143 RFSARV*QGLAWKWRCVDPLRPQMR 217
           RF+ R+ QG AW +   +P RPQ R
Sbjct: 81  RFTPRLHQGTAWAYGLPNPKRPQPR 105

>ref|NP_626397.1| putative small secreted hydrophilic protein [Streptomyces
           coelicolor A3(2)] gi|7481422|pir||T35523 probable small
           secreted hydrophilic protein - Streptomyces coelicolor
           gi|4539210|emb|CAB39868.1| putative small secreted
           hydrophilic protein [Streptomyces coelicolor A3(2)]
          Length = 107

 Score = 38.5 bits (88), Expect = 0.043
 Identities = 23/74 (31%), Positives = 32/74 (43%)
 Frame = +1

Query: 247 REQQQPAGAAGVSANATPATTQQNEQKSQGHSVVVIPTMASGQAGGDLESARRGSDAGSS 426
           +E + PA     S + TPA T  + + +    VV  P +  G +  D +  R G DAG S
Sbjct: 32  QEPKVPAKVELESGSPTPAPTSSSPEPTPSDQVVTRPPVTDGPSDDDDDDDRGGRDAGES 91

Query: 427 AGSTSQKGKDADAG 468
           A S      D   G
Sbjct: 92  ADSADDAAGDDGPG 105

>gb|AAH44363.1| Unknown (protein for MGC:55303) [Danio rerio]
          Length = 402

 Score = 37.0 bits (84), Expect = 0.13
 Identities = 34/115 (29%), Positives = 47/115 (40%), Gaps = 20/115 (17%)
 Frame = +1

Query: 178 EVAMRRPATTPDEEESEHLLAVGREQQQPAGAAGVSANA-----------------TPAT 306
           E A RR A   + E +E +    +E+QQPA A    ANA                 TP  
Sbjct: 273 EEAARRRAEEREREAAEQVERAAQEEQQPASA---QANANTEQTSASETKDGEDKPTPME 329

Query: 307 TQQNEQKSQGHSVVVIPTMASGQAGGDLESARRGSDAG---SSAGSTSQKGKDAD 462
           T+   + S+G       T A+G+     E A   +D G   S+A S S  G  A+
Sbjct: 330 TESLAETSEGSQEAEQGTPAAGEKAAQPEPAEGATDEGTSDSTAPSESSSGPPAE 384

>ref|XP_317815.1| ENSANGP00000004820 [Anopheles gambiae] gi|21300873|gb|EAA13018.1|
           ENSANGP00000004820 [Anopheles gambiae str. PEST]
          Length = 819

 Score = 36.2 bits (82), Expect = 0.21
 Identities = 19/76 (25%), Positives = 37/76 (48%)
 Frame = +1

Query: 214 EEESEHLLAVGREQQQPAGAAGVSANATPATTQQNEQKSQGHSVVVIPTMASGQAGGDLE 393
           + +S+      RE++     +G+S  AT    Q ++     HS  ++ T A+  A GD +
Sbjct: 338 QHQSKRSDPANREKRHSLTTSGLSTTATGGPLQPSQAAPHRHSTEMLNTEAAAAAAGDAK 397

Query: 394 SARRGSDAGSSAGSTS 441
            +R+  DA ++   T+
Sbjct: 398 PSRQSVDATTAVAPTT 413



EST assemble image


clone accession position
1 MXL034e08_r BP095018 1 212
2 MX023g03_r BP087043 14 487




Chlamydomonas reinhardtii
Kazusa DNA Research Institute