KCC003367A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003367A_C01 KCC003367A_c01
ggccgaccactaagtgTTGCACTAAAGTCTCCAAGATTCCAGTCGCCACTTTAGCCCATT
TAGCGCTTGCAAACGTGATCGTTCAAACGCGACAGATGGCGCTTGCTCTTGCTATAAAAG
ACGTCAATTTTGAGGCCTTAACAACTGACAATCATGTCGCCCGAAGATAAGCGCAAGTTT
TGCACCTTTTGGGGTTGCACTCTGCGCCGCGCTGGGCTCGCTGCTCGGCGCGGTTCAGAA
CGCTCAATGCTGGACCAGGCTGCTTCGTCGACCATGGCCGTCGTTGGCCACGCTGCAGCG
GCCGTGCTGGACAACCCGCACCAGTTTCGGCTGCTGCCCTCACCCTACTACGTGCAGCCC
CGCTCCCCAACTTCGTCTGCGACTTCTGGACTGACGACCAGTTCCGCGCCAACTTCCGCC
TGACGCGCGCGTCCTTCAAGGCCCTGGTGGACAGCCTGCG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003367A_C01 KCC003367A_c01
         (460 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|ZP_00032585.1| COG4261: Predicted acyltransferase [Burkholde...    36  0.18
dbj|BAC98610.1| Epstein-Barr virus EBNA-1-like protein [Oryza sa...    34  0.68
ref|ZP_00091362.1| COG2192: Predicted carbamoyl transferase, Nod...    33  1.2
dbj|BAC98611.1| Epstein-Barr virus EBNA-1-like protein [Oryza sa...    33  1.2
ref|NP_644527.1| sialic acid-specific 9-O-acetylesterase [Xantho...    33  1.5

>ref|ZP_00032585.1| COG4261: Predicted acyltransferase [Burkholderia fungorum]
          Length = 860

 Score = 36.2 bits (82), Expect = 0.18
 Identities = 27/63 (42%), Positives = 35/63 (54%), Gaps = 1/63 (1%)
 Frame = -1

Query: 460 RRLSTRALKDARVRRKLA-RNWSSVQKSQTKLGSGAARSRVRAAAETGAGCPARPLQRGQ 284
           RR S R L DA  RR LA R  + V +S    G+GAA  R +A A +  G PAR ++  +
Sbjct: 211 RRRSDR-LGDAPRRRPLAGRARAGVDRSSEVHGAGAAGRRAQAHARSRRGAPARAVRVSR 269

Query: 283 RRP 275
            RP
Sbjct: 270 ERP 272

>dbj|BAC98610.1| Epstein-Barr virus EBNA-1-like protein [Oryza sativa (japonica
           cultivar-group)]
          Length = 513

 Score = 34.3 bits (77), Expect = 0.68
 Identities = 25/79 (31%), Positives = 39/79 (48%)
 Frame = -1

Query: 427 RVRRKLARNWSSVQKSQTKLGSGAARSRVRAAAETGAGCPARPLQRGQRRPWSTKQPGPA 248
           R R  +AR     ++ +T+LG+G +R+R RA    GAG  +R   R  R   S ++   A
Sbjct: 383 RARGAVARE----RRGKTRLGAGGSRARARAERR-GAGPGSRACARRAREGHSARRRALA 437

Query: 247 LSVLNRAEQRAQRGAECNP 191
            +    AE   +RG+   P
Sbjct: 438 RAAWGGAEGERERGSGSAP 456

>ref|ZP_00091362.1| COG2192: Predicted carbamoyl transferase, NodU family [Azotobacter
           vinelandii]
          Length = 1081

 Score = 33.5 bits (75), Expect = 1.2
 Identities = 19/50 (38%), Positives = 23/50 (46%)
 Frame = -2

Query: 429 RASGGSWRGTGRQSRSRRRSWGAGLHVVG*GQQPKLVRVVQHGRCSVAND 280
           R +GG+ RG+GR  R  RR   AG H  G    P+   V    RC    D
Sbjct: 135 RPAGGTRRGSGRHRRPARRGTLAGRHAPGQPAAPRGPAVRGRRRCGAGTD 184

>dbj|BAC98611.1| Epstein-Barr virus EBNA-1-like protein [Oryza sativa (japonica
           cultivar-group)]
          Length = 310

 Score = 33.5 bits (75), Expect = 1.2
 Identities = 21/66 (31%), Positives = 34/66 (50%)
 Frame = -1

Query: 388 QKSQTKLGSGAARSRVRAAAETGAGCPARPLQRGQRRPWSTKQPGPALSVLNRAEQRAQR 209
           ++ +T+LG+G +R+R RA    GAG  +R   R  R   S ++   A +    AE   +R
Sbjct: 189 RRGKTRLGAGVSRARARAERR-GAGRGSRACARRAREGHSARRRALARAARGGAEGERER 247

Query: 208 GAECNP 191
           G+   P
Sbjct: 248 GSGSAP 253

>ref|NP_644527.1| sialic acid-specific 9-O-acetylesterase [Xanthomonas axonopodis pv.
           citri str. 306] gi|21110663|gb|AAM39063.1| sialic
           acid-specific 9-O-acetylesterase [Xanthomonas axonopodis
           pv. citri str. 306]
          Length = 654

 Score = 33.1 bits (74), Expect = 1.5
 Identities = 27/67 (40%), Positives = 33/67 (48%)
 Frame = +1

Query: 199 TLRRAGLAARRGSERSMLDQAASSTMAVVGHAAAAVLDNPHQFRLLPSPYYVQPRSPTSS 378
           T RR GL     S    L  A  ST+A         LD P Q+R++P      PR+P SS
Sbjct: 364 TYRRGGLLGDAPSRA--LQFADGSTVA---------LDAPWQYRIVPQAVGTPPRAPWSS 412

Query: 379 ATSGLTT 399
           A +GLTT
Sbjct: 413 A-AGLTT 418



EST assemble image


clone accession position
1 MXL034h08_r BP095044 1 386
2 MX016g07_r BP086787 17 460
3 MXL002c05_r BP093021 53 396




Chlamydomonas reinhardtii
Kazusa DNA Research Institute