KCC003362A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003362A_C01 KCC003362A_c01
gttaatCTCCCACAAAGCAGCTGACCAGATACTGTACTTGCGCCTGAAAAGAAGCAATTC
CTCGTTTTCCTAGGGTGTCGCCACAATGCAGTCCCTAGTTGTCCATAGATCGACCTCTGG
TGCAACACGGCGCAGCTGTGTGGCGCCAGCGCGCGTGCCTCGGCTCGCGGTGCCTGTGCG
CGCTTCGGCTGAGCCTGCCGCGCCCAAGCCGAAGCCGAAGGCGCCTCAGCAGATGCTGGT
GTACTCGCCGCCCCACCCGCTCATCAAGCACTGGCTCGCCATCCTGCGCTCCAACTTCAC
GCCGCCGCCCATGTTCCGCTCGGCGTGTGCGGAGCTGGGTCGGCTGCTGATCTATGAGGC
CATGCGCGAGTTCCAGCCCACCATGGAGCAGCAGGTGGAG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003362A_C01 KCC003362A_c01
         (400 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_190958.1| uracil phosphoribosyltransferase-related protei...    84  6e-16
gb|AAM61325.1| uracil phosphoribosyltransferase-like protein [Ar...    84  6e-16
ref|NP_850699.1| uracil phosphoribosyltransferase-related protei...    80  9e-15
sp|P93394|UPP_TOBAC Uracil phosphoribosyltransferase (UMP pyroph...    76  1e-13
ref|NP_682554.1| uracil phosphoribosyltransferase [Thermosynecho...    75  3e-13

>ref|NP_190958.1| uracil phosphoribosyltransferase-related protein [Arabidopsis
           thaliana] gi|11258308|pir||T45930 uracil
           phosphoribosyltransferase-like protein - Arabidopsis
           thaliana gi|7630010|emb|CAB88352.1| uracil
           phosphoribosyltransferase-like protein [Arabidopsis
           thaliana] gi|15810301|gb|AAL07038.1| putative uracil
           phosphoribosyltransferase [Arabidopsis thaliana]
           gi|21281024|gb|AAM45046.1| putative uracil
           phosphoribosyltransferase [Arabidopsis thaliana]
          Length = 296

 Score = 83.6 bits (205), Expect = 6e-16
 Identities = 38/74 (51%), Positives = 54/74 (72%)
 Frame = +2

Query: 176 VRASAEPAAPKPKPKAPQQMLVYSPPHPLIKHWLAILRSNFTPPPMFRSACAELGRLLIY 355
           +RA  + AA +       +MLV+ PPHPLIKHW+++LR+  TP P+FR+A AELGRLL+Y
Sbjct: 60  IRARTKMAASEASINGSNRMLVFVPPHPLIKHWISVLRNEQTPCPVFRNAIAELGRLLMY 119

Query: 356 EAMREFQPTMEQQV 397
           EA RE+ PT+  ++
Sbjct: 120 EASREWLPTVVGEI 133

>gb|AAM61325.1| uracil phosphoribosyltransferase-like protein [Arabidopsis
           thaliana]
          Length = 296

 Score = 83.6 bits (205), Expect = 6e-16
 Identities = 38/74 (51%), Positives = 54/74 (72%)
 Frame = +2

Query: 176 VRASAEPAAPKPKPKAPQQMLVYSPPHPLIKHWLAILRSNFTPPPMFRSACAELGRLLIY 355
           +RA  + AA +       +MLV+ PPHPLIKHW+++LR+  TP P+FR+A AELGRLL+Y
Sbjct: 60  IRARTKMAASEASINGSNRMLVFVPPHPLIKHWISVLRNEQTPCPVFRNAIAELGRLLMY 119

Query: 356 EAMREFQPTMEQQV 397
           EA RE+ PT+  ++
Sbjct: 120 EASREWLPTVVGEI 133

>ref|NP_850699.1| uracil phosphoribosyltransferase-related protein [Arabidopsis
           thaliana]
          Length = 231

 Score = 79.7 bits (195), Expect = 9e-15
 Identities = 36/67 (53%), Positives = 50/67 (73%)
 Frame = +2

Query: 197 AAPKPKPKAPQQMLVYSPPHPLIKHWLAILRSNFTPPPMFRSACAELGRLLIYEAMREFQ 376
           AA +       +MLV+ PPHPLIKHW+++LR+  TP P+FR+A AELGRLL+YEA RE+ 
Sbjct: 2   AASEASINGSNRMLVFVPPHPLIKHWISVLRNEQTPCPVFRNAIAELGRLLMYEASREWL 61

Query: 377 PTMEQQV 397
           PT+  ++
Sbjct: 62  PTVVGEI 68

>sp|P93394|UPP_TOBAC Uracil phosphoribosyltransferase (UMP pyrophosphorylase) (UPRTase)
           gi|7433941|pir||T03969 uracil phosphoribosyltransferase
           (EC 2.4.2.9) - common tobacco gi|1848214|emb|CAA72093.1|
           uracil phosphoribosyltransferase [Nicotiana tabacum]
          Length = 224

 Score = 76.3 bits (186), Expect = 1e-13
 Identities = 33/67 (49%), Positives = 51/67 (75%)
 Frame = +2

Query: 200 APKPKPKAPQQMLVYSPPHPLIKHWLAILRSNFTPPPMFRSACAELGRLLIYEAMREFQP 379
           A + K  +  +MLV+ PPHPLIKHW+++LR+  TP P+FR+A +ELGRLL+YEA R++ P
Sbjct: 2   AAQNKAMSGNRMLVFVPPHPLIKHWVSVLRNEQTPCPIFRNAMSELGRLLMYEASRDWLP 61

Query: 380 TMEQQVE 400
            +  +++
Sbjct: 62  IITGEIQ 68

>ref|NP_682554.1| uracil phosphoribosyltransferase [Thermosynechococcus elongatus
           BP-1] gi|22295490|dbj|BAC09316.1| uracil
           phosphoribosyltransferase [Thermosynechococcus elongatus
           BP-1]
          Length = 226

 Score = 74.7 bits (182), Expect = 3e-13
 Identities = 34/57 (59%), Positives = 41/57 (71%)
 Frame = +2

Query: 230 QMLVYSPPHPLIKHWLAILRSNFTPPPMFRSACAELGRLLIYEAMREFQPTMEQQVE 400
           Q+ VY PPHPLI+HWL + R   TP P+FR A  ELGR L YEA+RE+ PT+E  VE
Sbjct: 10  QLRVYVPPHPLIQHWLTVARDRNTPTPLFRVAMTELGRWLAYEAVREWLPTVETVVE 66



EST assemble image


clone accession position
1 MX012b02_r BP086582 1 400
2 MX018a08_r BP086838 7 393




Chlamydomonas reinhardtii
Kazusa DNA Research Institute