Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003359A_C01 KCC003359A_c01
(520 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAA94959.1| high-CO2 inducible, periplasmic protein [Chlamyd... 294 5e-79
dbj|BAA22844.1| HCR1 [Chlorococcum littorale] 90 2e-17
gb|AAP79264.1| ribulose-1,5-bisphosphate carboxylase/oxygenase l... 49 5e-05
ref|NP_730262.2| CG13731-PA [Drosophila melanogaster] gi|2838049... 47 2e-04
gb|AAM33652.1|AF508983_1 mastigoneme-like protein [Chlamydomonas... 45 6e-04
>dbj|BAA94959.1| high-CO2 inducible, periplasmic protein [Chlamydomonas reinhardtii]
gi|7658145|dbj|BAA94960.1| high-CO2 inducible,
periplasmic protein [Chlamydomonas reinhardtii]
Length = 362
Score = 294 bits (752), Expect = 5e-79
Identities = 151/157 (96%), Positives = 153/157 (97%)
Frame = +1
Query: 46 MSVGFLVLALGALVVATAQPTTTGTRFEGFSYAGNVIGYVNMTMDYCDIKAAMAAGNFTE 225
MSVGFLVLALGALVVATAQPTTTGTRFEGFSYAGNVIGYVNMTMDYCDIKAAMAAGNFTE
Sbjct: 1 MSVGFLVLALGALVVATAQPTTTGTRFEGFSYAGNVIGYVNMTMDYCDIKAAMAAGNFTE 60
Query: 226 ALSIYSTGKNSFSGLARRTFFRFASYITANGSVEPLHDSILAGKDTSSLDAAIRAALADG 405
ALSIYSTGKNSFSGLARRTFFRFASYITANGSVEPLHDSILAGKDTSSLDAAIRAALADG
Sbjct: 61 ALSIYSTGKNSFSGLARRTFFRFASYITANGSVEPLHDSILAGKDTSSLDAAIRAALADG 120
Query: 406 KATLAAGLIQVGTLKYHLHEVD*GYNKIQT*LAEGNG 516
KATLAAGLIQVGTLKYHLHEVD YNKI+T LA+G G
Sbjct: 121 KATLAAGLIQVGTLKYHLHEVDEAYNKIKTYLADGTG 157
>dbj|BAA22844.1| HCR1 [Chlorococcum littorale]
Length = 368
Score = 90.1 bits (222), Expect = 2e-17
Identities = 57/141 (40%), Positives = 79/141 (55%)
Frame = +1
Query: 49 SVGFLVLALGALVVATAQPTTTGTRFEGFSYAGNVIGYVNMTMDYCDIKAAMAAGNFTEA 228
SV +A G++ + Q TT G F ++GNV GYVNMT+DYCDI+AA+ AG+ A
Sbjct: 10 SVLLAFVAAGSVAGSVFQDTT-GLMLGPFKFSGNVAGYVNMTLDYCDIQAALYAGDTATA 68
Query: 229 LSIYSTGKNSFSGLARRTFFRFASYITANGSVEPLHDSILAGKDTSSLDAAIRAALADGK 408
L IY+ GKNS G A R+ FA + AN + + +D++ +T D A DG
Sbjct: 69 LEIYNFGKNSERGAAFRS---FALWAEANHTGQIFYDALGLPSETYLTD-VFSGAAGDGD 124
Query: 409 ATLAAGLIQVGTLKYHLHEVD 471
AT+A +I +KY HE D
Sbjct: 125 ATMAMAVIDAIKIKYMFHEWD 145
>gb|AAP79264.1| ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
[uncultured bacterium]
Length = 157
Score = 48.5 bits (114), Expect = 5e-05
Identities = 41/123 (33%), Positives = 54/123 (43%), Gaps = 18/123 (14%)
Frame = +2
Query: 188 TSRPPWLLATS--PRLCPSTLLARTRS----------LAWRAAPSSASP-----RTSPPT 316
T+RPPW +TS R C T A T S L W A S+ R+S T
Sbjct: 34 TARPPWASSTSCASRSCRKTAAAATSSIRTGDRCPVCLPWPPAASTCGTCPPWWRSSVTT 93
Query: 317 APWSRCTTPSWPARTRPPWTPPSGLPW-PTARPPWPPV*SRWARSSTTCTRWIEATTRFR 493
S P+ RPP PP+ PW P +RP P V SR R++++ W +T
Sbjct: 94 RCCSSVVAPTATPGVRPPAPPPTVWPWKPASRPATPAVRSRGNRATSS---WKPPST--A 148
Query: 494 PNW 502
P+W
Sbjct: 149 PSW 151
>ref|NP_730262.2| CG13731-PA [Drosophila melanogaster] gi|28380492|gb|AAF49349.4|
CG13731-PA [Drosophila melanogaster]
Length = 926
Score = 46.6 bits (109), Expect = 2e-04
Identities = 35/91 (38%), Positives = 39/91 (42%), Gaps = 9/91 (9%)
Frame = +2
Query: 179 TTATSRPPWLLATSPRLCPSTLLARTRS----LAWRAAPSSASPRTSPPTAPWSRCTTPS 346
T +RPP T P P T L T + R P PRT PPT P P+
Sbjct: 191 TRPPTRPPTRPPTRPPTPPPTYLPPTNKPLPPVTTRLPPPPPPPRTPPPTRP------PT 244
Query: 347 WPARTRPPWT--PPSGLPWP---TARPPWPP 424
P TRPP T PP+ P P T PP PP
Sbjct: 245 RPPTTRPPATYLPPTNKPLPPVTTRLPPPPP 275
Score = 45.8 bits (107), Expect = 3e-04
Identities = 39/114 (34%), Positives = 48/114 (41%), Gaps = 4/114 (3%)
Frame = +2
Query: 167 T*RWTTATSRPPWLLATSPRLCP-STLLARTRSLAWRAAPSSASPRTSPPTA---PWSRC 334
T R T T+ P L T P P +T L R P P T PPT P +
Sbjct: 493 TVRTTVRTTPRPTLPPTKPPTRPPTTYLPPPTVRTTRPPPPPTRPPTKPPTTYLPPVTVR 552
Query: 335 TTPSWPARTRPPWTPPSGLPWPTARPPWPPV*SRWARSSTTCTRWIEATTRFRP 496
TT + P TRPP PP+ P RPP PP R+ST ++ T + P
Sbjct: 553 TTRATPPPTRPPTRPPTP---PPTRPPPPP-----TRASTPAPTYLPPTNKPLP 598
Score = 44.3 bits (103), Expect = 0.001
Identities = 32/93 (34%), Positives = 37/93 (39%), Gaps = 11/93 (11%)
Frame = +2
Query: 179 TTATSRPPWLLATSPRLCPSTLLARTRSLAWRAAPSSASPRTSPPTAPWSRCTTPSWPAR 358
T T+RPP P P+T L RA P P T PPT P +R P A
Sbjct: 524 TVRTTRPPPPPTRPPTKPPTTYLPPVTVRTTRATPPPTRPPTRPPTPPPTRPPPPPTRAS 583
Query: 359 T-RPPWTPPSGLPWP----------TARPPWPP 424
T P + PP+ P P T RP PP
Sbjct: 584 TPAPTYLPPTNKPLPPVTVRTTVRTTPRPTLPP 616
Score = 43.9 bits (102), Expect = 0.001
Identities = 35/86 (40%), Positives = 40/86 (45%), Gaps = 7/86 (8%)
Frame = +2
Query: 188 TSRPP--WLLATSPRLCPSTLLARTRSLAWRAAPSSASPRTSPPTAPWSRCTTPSWPART 361
T+RPP +L T+ L P T R P SPRT PPT P P+ P T
Sbjct: 248 TTRPPATYLPPTNKPLPPVTT---------RLPPPPPSPRTPPPTRP------PTRPPTT 292
Query: 362 RPPWT--PPSGLPWP---TARPPWPP 424
RPP T PP+ P P T PP PP
Sbjct: 293 RPPATYLPPTNKPLPPVTTRLPPPPP 318
Score = 42.0 bits (97), Expect = 0.005
Identities = 32/94 (34%), Positives = 37/94 (39%), Gaps = 12/94 (12%)
Frame = +2
Query: 179 TTATSRPPWLLATSPRLCPSTLLARTRSLAWRAAPSSASPRTSPPTAP--WSRCTTPSWP 352
T T+RPP P P+T L RA P P T PPT P R TTP+
Sbjct: 421 TVRTTRPPPPPTRPPTKPPTTYLPPVTVRTTRATPPPTRPPTRPPTYPPTTRRLTTPA-- 478
Query: 353 ARTRPPWTPPSGLPWP----------TARPPWPP 424
P + PP+ P P T RP PP
Sbjct: 479 ----PTYLPPTNKPLPPVTVRTTVRTTPRPTLPP 508
Score = 42.0 bits (97), Expect = 0.005
Identities = 32/94 (34%), Positives = 37/94 (39%), Gaps = 12/94 (12%)
Frame = +2
Query: 179 TTATSRPPWLLATSPRLCPSTLLARTRSLAWRAAPSSASPRTSPPTAP--WSRCTTPSWP 352
T T+RPP P P+T L RA P P T PPT P R TTP+
Sbjct: 735 TVRTTRPPPPPTRPPTKPPTTYLPPVTVRTTRATPPPTRPPTRPPTYPPTTRRLTTPA-- 792
Query: 353 ARTRPPWTPPSGLPWP----------TARPPWPP 424
P + PP+ P P T RP PP
Sbjct: 793 ----PTYLPPTNKPLPPVTVRTTVRTTPRPTLPP 822
Score = 40.4 bits (93), Expect = 0.014
Identities = 31/91 (34%), Positives = 36/91 (39%), Gaps = 12/91 (13%)
Frame = +2
Query: 188 TSRPPWLLATSPRLCPSTLLARTRSLAWRAAPSSASPRTSPPTAP--WSRCTTPSWPART 361
T+RPP P P+T L RA P P T PPT P R TTP+
Sbjct: 635 TTRPPPPPTRPPTKPPTTYLPPVTVRTTRATPPPTRPPTRPPTYPPTTRRLTTPA----- 689
Query: 362 RPPWTPPSGLPWP----------TARPPWPP 424
P + PP+ P P T RP PP
Sbjct: 690 -PTYLPPTNKPLPPVTVRTTVRTTPRPTLPP 719
Score = 37.7 bits (86), Expect = 0.089
Identities = 35/102 (34%), Positives = 40/102 (38%), Gaps = 15/102 (14%)
Frame = +2
Query: 167 T*RWTTATSRPPWLLATSPRLCPSTLLARTRSLAWRAAPSSASPRTSPPTA---PWSRCT 337
T R T + PP T P P+T L R P P T PPT P + T
Sbjct: 394 TVRTTPRPTPPPTKPPTRP---PTTYLPPPTVRTTRPPPPPTRPPTKPPTTYLPPVTVRT 450
Query: 338 TPSWPARTRPPWTPPS--------GLPWPTARP----PWPPV 427
T + P TRPP PP+ P PT P P PPV
Sbjct: 451 TRATPPPTRPPTRPPTYPPTTRRLTTPAPTYLPPTNKPLPPV 492
Score = 37.7 bits (86), Expect = 0.089
Identities = 30/93 (32%), Positives = 38/93 (40%)
Frame = +2
Query: 188 TSRPPWLLATSPRLCPSTLLARTRSLAWRAAPSSASPRTSPPTAPWSRCTTPSWPARTRP 367
T P +L T+ L P T+ R+ P P T PPT P + P TRP
Sbjct: 687 TPAPTYLPPTNKPLPPVTVRTTVRT-----TPRPTLPPTKPPTRPPTTYLPPPTVRTTRP 741
Query: 368 PWTPPSGLPWPTARPPWPPV*SRWARSSTTCTR 466
P PP+ P PPV R R++ TR
Sbjct: 742 P-PPPTRPPTKPPTTYLPPVTVRTTRATPPPTR 773
Score = 37.4 bits (85), Expect = 0.12
Identities = 32/92 (34%), Positives = 38/92 (40%), Gaps = 13/92 (14%)
Frame = +2
Query: 188 TSRPPWLLATSPRLCPSTLLARTRSLAWRAAPSSASPRTSPPTAPWS--------RCTTP 343
T P +L T+ L P T+ R+ P P T PPT P + R T P
Sbjct: 790 TPAPTYLPPTNKPLPPVTVRTTVRT-----TPRPTLPPTRPPTKPPTTYLPPPTVRTTRP 844
Query: 344 SWPARTRPPWTPPSGLPWP-----TARPPWPP 424
P TRPP PP+ P T RPP PP
Sbjct: 845 P-PPPTRPPTKPPTTYLPPVTVVRTTRPPPPP 875
Score = 36.2 bits (82), Expect = 0.26
Identities = 36/118 (30%), Positives = 46/118 (38%), Gaps = 15/118 (12%)
Frame = +2
Query: 188 TSRPP--WLLATSPRLCPSTLLARTRSLAWRAAPSSASPRTSPPTAPWSRCTT------- 340
T+RPP +L T+ L P T R P PRT PPT P ++ T
Sbjct: 291 TTRPPATYLPPTNKPLPPVTT---------RLPPPPPPPRTPPPTRPPTKPPTTRPPATY 341
Query: 341 ------PSWPARTRPPWTPPSGLPWPTARPPWPPV*SRWARSSTTCTRWIEATTRFRP 496
P P TR P PP+ RPP PP R+ST ++ T + P
Sbjct: 342 LPPTNKPPPPVTTRRPTPPPT-------RPPPPP-----TRASTPAPTYLPPTNKPLP 387
Score = 36.2 bits (82), Expect = 0.26
Identities = 35/103 (33%), Positives = 39/103 (36%), Gaps = 16/103 (15%)
Frame = +2
Query: 167 T*RWTTATSRPPWLLATSPRLCPSTLLARTRSL-AWRAAPSSASPRTSPPTA-------P 322
T R T T+ P L T P P T S+ R P P T PPT
Sbjct: 601 TVRTTVRTTPRPTLPPTKPPTRPPTTYLPPPSVRTTRPPPPPTRPPTKPPTTYLPPVTVR 660
Query: 323 WSRCTTPSWPARTRPPWTPPS----GLPWPTARP----PWPPV 427
+R T P TRPP PP+ P PT P P PPV
Sbjct: 661 TTRATPPPTRPPTRPPTYPPTTRRLTTPAPTYLPPTNKPLPPV 703
Score = 34.7 bits (78), Expect = 0.75
Identities = 29/94 (30%), Positives = 38/94 (39%)
Frame = +2
Query: 185 ATSRPPWLLATSPRLCPSTLLARTRSLAWRAAPSSASPRTSPPTAPWSRCTTPSWPARTR 364
+T P +L T+ L P T+ R+ P P T PPT P + P RT
Sbjct: 583 STPAPTYLPPTNKPLPPVTVRTTVRT-----TPRPTLPPTKPPTRPPTTYLPPP-SVRTT 636
Query: 365 PPWTPPSGLPWPTARPPWPPV*SRWARSSTTCTR 466
P PP+ P PPV R R++ TR
Sbjct: 637 RPPPPPTRPPTKPPTTYLPPVTVRTTRATPPPTR 670
Score = 33.9 bits (76), Expect = 1.3
Identities = 20/51 (39%), Positives = 25/51 (48%), Gaps = 5/51 (9%)
Frame = +2
Query: 287 SASPRTSPPTAPWSRCTT--PSWPARTRPPWTPPSGLPWP---TARPPWPP 424
+ P T PPT P +R T P+ P P + PP+ P P T PP PP
Sbjct: 182 TTQPPTRPPTRPPTRPPTRPPTRPPTPPPTYLPPTNKPLPPVTTRLPPPPP 232
Score = 33.5 bits (75), Expect = 1.7
Identities = 28/87 (32%), Positives = 35/87 (40%), Gaps = 8/87 (9%)
Frame = +2
Query: 188 TSRPPWLLATSPRLCPSTLLARTRSLAWRAAPSSASPRTSPPTAPWSRCTTPSWPARTRP 367
T++PP + T P T + A AP+ P P R T + P T P
Sbjct: 345 TNKPPPPVTTRRPTPPPTRPPPPPTRASTPAPTYLPPTNKPLPPVTVRTTVRTTPRPTPP 404
Query: 368 PWTPPSG-----LPWP---TARPPWPP 424
P PP+ LP P T RPP PP
Sbjct: 405 PTKPPTRPPTTYLPPPTVRTTRPPPPP 431
Score = 33.1 bits (74), Expect = 2.2
Identities = 28/83 (33%), Positives = 29/83 (34%), Gaps = 1/83 (1%)
Frame = +2
Query: 179 TTATSRPPWLLATSPRLCPSTLLARTRSLAWRAAPSSASPRTSPPTAPWSRCTTPSWPAR 358
TT PP SPR P T P + P T PP P P
Sbjct: 267 TTRLPPPP----PSPRTPPPT------------RPPTRPPTTRPPATYLPPTNKPLPPVT 310
Query: 359 TR-PPWTPPSGLPWPTARPPWPP 424
TR PP PP P PT P PP
Sbjct: 311 TRLPPPPPPPRTPPPTRPPTKPP 333
Score = 33.1 bits (74), Expect = 2.2
Identities = 31/98 (31%), Positives = 41/98 (41%), Gaps = 4/98 (4%)
Frame = +2
Query: 185 ATSRPPWLLATSPRLCPSTLLARTRSLAWRAAPSSASPR-TSPPTAPWSRCTTPSWPART 361
+T P +L T+ L P T+ R+ +PR T PPT P +R T P T
Sbjct: 372 STPAPTYLPPTNKPLPPVTVRTTVRT----------TPRPTPPPTKPPTRPPTTYLPPPT 421
Query: 362 RPPWTPPSGLPWPTARPP---WPPV*SRWARSSTTCTR 466
PP P +PP PPV R R++ TR
Sbjct: 422 VRTTRPPPPPTRPPTKPPTTYLPPVTVRTTRATPPPTR 459
Score = 32.3 bits (72), Expect = 3.7
Identities = 18/48 (37%), Positives = 19/48 (39%)
Frame = +2
Query: 281 PSSASPRTSPPTAPWSRCTTPSWPARTRPPWTPPSGLPWPTARPPWPP 424
P + P T PP P P TR P PPS P RPP P
Sbjct: 242 PPTRPPTTRPPATYLPPTNKPLPPVTTRLPPPPPSPRTPPPTRPPTRP 289
Score = 32.0 bits (71), Expect = 4.9
Identities = 18/42 (42%), Positives = 20/42 (46%), Gaps = 3/42 (7%)
Frame = +2
Query: 308 PPTAPWS---RCTTPSWPARTRPPWTPPSGLPWPTARPPWPP 424
PP P+ R T P TRPP PP+ P RPP PP
Sbjct: 171 PPDVPFDLPVRTTQPPTRPPTRPPTRPPTR---PPTRPPTPP 209
Score = 31.2 bits (69), Expect = 8.3
Identities = 31/98 (31%), Positives = 36/98 (36%), Gaps = 1/98 (1%)
Frame = +2
Query: 167 T*RWTTATSRPPWLLATSPRLCP-STLLARTRSLAWRAAPSSASPRTSPPTAPWSRCTTP 343
T R T T+ P L T P P +T L R P P T PPT T
Sbjct: 704 TVRTTVRTTPRPTLPPTKPPTRPPTTYLPPPTVRTTRPPPPPTRPPTKPPTTYLPPVTVR 763
Query: 344 SWPARTRPPWTPPSGLPWPTARPPWPPV*SRWARSSTT 457
+ A T PP P PT P +PP R + T
Sbjct: 764 TTRA-TPPPTRP------PTRPPTYPPTTRRLTTPAPT 794
>gb|AAM33652.1|AF508983_1 mastigoneme-like protein [Chlamydomonas reinhardtii]
Length = 1997
Score = 45.1 bits (105), Expect = 6e-04
Identities = 24/69 (34%), Positives = 35/69 (49%)
Frame = +2
Query: 218 SPRLCPSTLLARTRSLAWRAAPSSASPRTSPPTAPWSRCTTPSWPARTRPPWTPPSGLPW 397
S R P +LL++ ++ +P SP PP R +P+ P+ P PPS P
Sbjct: 1844 SQRCKPCSLLSKPKTARTEQSPPPPSPSPPPPPPASPRPPSPNPPSPRPPSPAPPSPNPP 1903
Query: 398 PTARPPWPP 424
PT++PP PP
Sbjct: 1904 PTSQPPSPP 1912
Score = 35.8 bits (81), Expect = 0.34
Identities = 19/48 (39%), Positives = 24/48 (49%)
Frame = +2
Query: 281 PSSASPRTSPPTAPWSRCTTPSWPARTRPPWTPPSGLPWPTARPPWPP 424
P ASPR P P R +P+ P+ PP + P P P+ PP PP
Sbjct: 1875 PPPASPRPPSPNPPSPRPPSPAPPSPNPPPTSQPPSPP-PSPPPPRPP 1921
Score = 33.1 bits (74), Expect = 2.2
Identities = 20/45 (44%), Positives = 22/45 (48%)
Frame = +2
Query: 281 PSSASPRTSPPTAPWSRCTTPSWPARTRPPWTPPSGLPWPTARPP 415
PS A P +PP P S+ PS P PP PP P P RPP
Sbjct: 1893 PSPAPPSPNPP--PTSQ--PPSPPPSPPPPRPPPPRRPHPARRPP 1933
Score = 32.0 bits (71), Expect = 4.9
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = +2
Query: 275 AAPSSASPRTSPPTAPWSRCTTPSWPARTRPPWTPPSGLPWPTARPPWP 421
A+P SP P P +P+ P ++PP PPS P RPP P
Sbjct: 1878 ASPRPPSPNPPSPRPPSPAPPSPNPPPTSQPPSPPPSP---PPPRPPPP 1923
