KCC003358A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003358A_C01 KCC003358A_c01
ctgaagcccgatatcaaagtgattgcgccctggcgcgagtgggacctgctgtcgcgcacc
aagctgatcgagtacgCGGAGCAGAACAACATCCCCGTGCCCGCGTCCAAGCGCGGTGAG
CCTCCGTTCTCCATGGACGCCAACCTGCTGCACATCAGCTACGAGGGCAACGCGCTGGAG
GACCCCTGGACCACCCCCGACGATTCCATGTTCACCCGCTCTGTGTCGCCCGAGAAGGCG
CCGGACCAGCCCACCACCATTGAGATTGCCTTTGAGAAGGGCAACCCGGTGGCCATTGAC
GGCGTGCCCATGAGCCCCGCCACCATCCTCACCAAGCTCAACGAGCTGGGAGGCCAGAAC
GGCATTGGCCGCGTGGACCTGGTGGAGTCGCGCTTCGTGGGCATGAAGTCGCGCGGCGTG
TACGAGACCCCCGGCGGCACCATCCTGCAGGTGGCGCACCGCGGCATGGAGT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003358A_C01 KCC003358A_c01
         (472 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|ZP_00055921.1| COG0137: Argininosuccinate synthase [Magnetos...   244  4e-64
ref|ZP_00044748.1| COG0137: Argininosuccinate synthase [Magnetoc...   241  4e-63
ref|ZP_00013177.1| COG0137: Argininosuccinate synthase [Rhodospi...   235  2e-61
ref|ZP_00008002.1| COG0137: Argininosuccinate synthase [Rhodobac...   229  1e-59
ref|NP_418948.1| argininosuccinate synthase [Caulobacter crescen...   217  6e-56

>ref|ZP_00055921.1| COG0137: Argininosuccinate synthase [Magnetospirillum
           magnetotacticum]
          Length = 490

 Score =  244 bits (623), Expect = 4e-64
 Identities = 115/157 (73%), Positives = 135/157 (85%)
 Frame = +1

Query: 1   LKPDIKVIAPWREWDLLSRTKLIEYAEQNNIPVPASKRGEPPFSMDANLLHISYEGNALE 180
           LKPDIKVIAPWR WDL SRT L+++AE++ IP+   KRGE P+S DANLLHISYEG ALE
Sbjct: 139 LKPDIKVIAPWRLWDLNSRTALLDFAEKHQIPIAKDKRGEAPYSTDANLLHISYEGKALE 198

Query: 181 DPWTTPDDSMFTRSVSPEKAPDQPTTIEIAFEKGNPVAIDGVPMSPATILTKLNELGGQN 360
           DPW  P+D M+TRSVSPE APD+PT +EI FEKG+ VAIDGV +SPA +LTKLN+LGG N
Sbjct: 199 DPWIEPNDDMYTRSVSPENAPDKPTYVEIEFEKGDAVAIDGVRLSPAALLTKLNQLGGAN 258

Query: 361 GIGRVDLVESRFVGMKSRGVYETPGGTILQVAHRGME 471
           GIGR+DLVE+RFVGMKSRGVYETPGG++L VAHR +E
Sbjct: 259 GIGRLDLVENRFVGMKSRGVYETPGGSVLIVAHRAVE 295

>ref|ZP_00044748.1| COG0137: Argininosuccinate synthase [Magnetococcus sp. MC-1]
          Length = 426

 Score =  241 bits (614), Expect = 4e-63
 Identities = 114/157 (72%), Positives = 131/157 (82%)
 Frame = +1

Query: 1   LKPDIKVIAPWREWDLLSRTKLIEYAEQNNIPVPASKRGEPPFSMDANLLHISYEGNALE 180
           L+PDI+VIAPWREWDL SR KL  YAE++ IPVP  KRGE P+SMD NLLHIS+EG ALE
Sbjct: 156 LRPDIRVIAPWREWDLTSRDKLFAYAEKHGIPVPTDKRGEVPYSMDRNLLHISFEGKALE 215

Query: 181 DPWTTPDDSMFTRSVSPEKAPDQPTTIEIAFEKGNPVAIDGVPMSPATILTKLNELGGQN 360
           DPW  PD+ MF  SVSPEKAPDQ T +E+ F +G+ VAID   MSPAT+L KLN+LGG+N
Sbjct: 216 DPWVEPDEEMFVLSVSPEKAPDQATYVELTFRQGDLVAIDDQEMSPATLLAKLNQLGGRN 275

Query: 361 GIGRVDLVESRFVGMKSRGVYETPGGTILQVAHRGME 471
           GIGR+DLVE+R+VGMKSRGVYETPGGTIL VAHR ME
Sbjct: 276 GIGRLDLVENRYVGMKSRGVYETPGGTILGVAHRAME 312

>ref|ZP_00013177.1| COG0137: Argininosuccinate synthase [Rhodospirillum rubrum]
          Length = 411

 Score =  235 bits (600), Expect = 2e-61
 Identities = 110/157 (70%), Positives = 132/157 (84%)
 Frame = +1

Query: 1   LKPDIKVIAPWREWDLLSRTKLIEYAEQNNIPVPASKRGEPPFSMDANLLHISYEGNALE 180
           LKPDIK+IAPWR WDL SRTKLIEYA ++ IPVP  K GE P+SMDANLLHISYEG ALE
Sbjct: 145 LKPDIKIIAPWRTWDLHSRTKLIEYAMRHQIPVPKDKHGEAPYSMDANLLHISYEGKALE 204

Query: 181 DPWTTPDDSMFTRSVSPEKAPDQPTTIEIAFEKGNPVAIDGVPMSPATILTKLNELGGQN 360
           +PWT P + MF  +VSPE APD+   IE+ FE+G+ VAIDG  ++PA +L KLNE+GG++
Sbjct: 205 NPWTEPSEDMFRLTVSPEAAPDKAQYIEVDFERGDAVAIDGEKLTPAALLAKLNEIGGRH 264

Query: 361 GIGRVDLVESRFVGMKSRGVYETPGGTILQVAHRGME 471
           G+GR+DLVE+R+VGMKSRGVYETPGGTILQVAHR +E
Sbjct: 265 GVGRLDLVENRYVGMKSRGVYETPGGTILQVAHRAVE 301

>ref|ZP_00008002.1| COG0137: Argininosuccinate synthase [Rhodobacter sphaeroides]
          Length = 418

 Score =  229 bits (584), Expect = 1e-59
 Identities = 111/157 (70%), Positives = 130/157 (82%)
 Frame = +1

Query: 1   LKPDIKVIAPWREWDLLSRTKLIEYAEQNNIPVPASKRGEPPFSMDANLLHISYEGNALE 180
           L P IKVIAPWREWDL SRTKL+E+AEQN IP+  +KRGE PFS+DANLLH S EG  LE
Sbjct: 148 LDPAIKVIAPWREWDLTSRTKLLEFAEQNQIPIAKNKRGEAPFSVDANLLHTSSEGRVLE 207

Query: 181 DPWTTPDDSMFTRSVSPEKAPDQPTTIEIAFEKGNPVAIDGVPMSPATILTKLNELGGQN 360
           +P     D ++ R+V PEKAPD P  +EIAFEKG+ VAI+G  MSPATILTKLNELGG++
Sbjct: 208 NPGEEAPDYVYQRTVDPEKAPDAPEFVEIAFEKGDAVAINGEAMSPATILTKLNELGGKH 267

Query: 361 GIGRVDLVESRFVGMKSRGVYETPGGTILQVAHRGME 471
           G+GR+DLVE+RFVGMKSRG+YETPGGTIL  AHRG+E
Sbjct: 268 GVGRLDLVENRFVGMKSRGIYETPGGTILLEAHRGIE 304

>ref|NP_418948.1| argininosuccinate synthase [Caulobacter crescentus CB15]
           gi|24211528|sp|Q9ABU1|ASSY_CAUCR Argininosuccinate
           synthase (Citrulline--aspartate ligase)
           gi|25293767|pir||H87264 argininosuccinate synthase
           [imported] - Caulobacter crescentus
           gi|13421238|gb|AAK22116.1| argininosuccinate synthase
           [Caulobacter crescentus CB15]
          Length = 408

 Score =  217 bits (552), Expect = 6e-56
 Identities = 105/157 (66%), Positives = 124/157 (78%)
 Frame = +1

Query: 1   LKPDIKVIAPWREWDLLSRTKLIEYAEQNNIPVPASKRGEPPFSMDANLLHISYEGNALE 180
           L+PDI VIAPWREWD  SR  L+++AE++ I +   KRGE PFS+DANLLH S EG  LE
Sbjct: 140 LEPDITVIAPWREWDFKSREALLDFAEKHQIQITKDKRGEAPFSVDANLLHSSSEGKVLE 199

Query: 181 DPWTTPDDSMFTRSVSPEKAPDQPTTIEIAFEKGNPVAIDGVPMSPATILTKLNELGGQN 360
           DP     + +  R+++PE APD PT I I FEKG+PVAIDGV MSPAT+LTKLNELG  N
Sbjct: 200 DPAVEAPEFVHMRTIAPEDAPDAPTIITIDFEKGDPVAIDGVAMSPATLLTKLNELGRDN 259

Query: 361 GIGRVDLVESRFVGMKSRGVYETPGGTILQVAHRGME 471
           G+GR+DLVE+RFVGMKSRGVYETPGGTIL  AHRG+E
Sbjct: 260 GVGRLDLVENRFVGMKSRGVYETPGGTILLAAHRGIE 296



EST assemble image


clone accession position
1 MX068e01_r BP088768 1 335
2 MX008b10_r BP086406 77 472




Chlamydomonas reinhardtii
Kazusa DNA Research Institute