Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003349A_C01 KCC003349A_c01
(558 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_00053823.1| COG1775: Benzoyl-CoA reductase/2-hydroxygluta... 47 1e-04
gb|AAC44888.1| unknown [Nannocystis exedens] 46 3e-04
ref|NP_629941.1| putative ABC transporter [Streptomyces coelicol... 44 0.001
ref|ZP_00013469.1| COG0600: ABC-type nitrate/sulfonate/bicarbona... 43 0.003
ref|NP_294953.1| hypothetical protein [Deinococcus radiodurans] ... 42 0.004
>ref|ZP_00053823.1| COG1775: Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase
subunit, BcrC/BadD/HgdB [Magnetospirillum
magnetotacticum]
Length = 543
Score = 47.4 bits (111), Expect = 1e-04
Identities = 39/105 (37%), Positives = 52/105 (49%), Gaps = 12/105 (11%)
Frame = +3
Query: 177 RPW-------RWAPCA-TYPRA---PLATWSSARSVAARQDTGPWPPSSSRPAWAAFHEP 323
RPW RW P A T P A + W+ +R A R + P P S++RP W A P
Sbjct: 10 RPWPSPISRTRWKPRANTSPTARSRASSMWTRSRPAAPRASSTPRPASATRPCWTA---P 66
Query: 324 WMSCFRWTATSPLSWPTSLA-TRRWRATRRSSATRLSAPRPPSRC 455
W + + P+S PTSL+ T + RA SA+RL+ PS C
Sbjct: 67 WSAT---SCRKPVS-PTSLSNTPKIRARCSRSASRLALSPIPSSC 107
>gb|AAC44888.1| unknown [Nannocystis exedens]
Length = 290
Score = 46.2 bits (108), Expect = 3e-04
Identities = 40/122 (32%), Positives = 54/122 (43%), Gaps = 2/122 (1%)
Frame = +3
Query: 192 APCATYP-RAPLATWSSARSVAARQDTGPWPPSSSRPAWAAFHEPWMSCFRWTATSPLSW 368
AP A Y R+P + SSA ++ WP S + P W+A P + SP S
Sbjct: 17 APAAPYAWRSPSTSPSSASRRSSPSSAVRWPCSRTPPTWSATSPP--------SRSPCSP 68
Query: 369 PTSLATRRWRATRRSSATRLSAPRPPSRCR*RAR-PSSAPLRTATSSRRTCQVWPNRTCT 545
P+S R R S + R P+ C R+R PSS+ R+ S+ T PN C
Sbjct: 69 PSSRCVRPCRVAPTGSPAPRPSARSPTPCSSRSRAPSSSTARSPASAAATPTSNPN-PCW 127
Query: 546 SS 551
SS
Sbjct: 128 SS 129
>ref|NP_629941.1| putative ABC transporter [Streptomyces coelicolor A3(2)]
gi|7480352|pir||T35192 probable ABC transporter -
Streptomyces coelicolor gi|3036883|emb|CAA18516.1|
putative ABC transporter [Streptomyces coelicolor A3(2)]
Length = 744
Score = 44.3 bits (103), Expect = 0.001
Identities = 28/85 (32%), Positives = 37/85 (42%), Gaps = 3/85 (3%)
Frame = +1
Query: 106 PRTSEVCLPAPSSRGRCEHCSRAADHGDGHRAQPILALRWRPGPRPVPWLLA---KIQVP 276
P T V LP+P++ G R A HGDG + PGPR P ++ P
Sbjct: 326 PETPGVLLPSPATEGEPLEDGRGAGHGDGDGPASVAVPNRTPGPRQAPAPVSGHGPEAAP 385
Query: 277 GPLPPAVQPGQPFTSHG*AASDGPP 351
P PA P +P + A + GPP
Sbjct: 386 SPSAPAPGPSEPASGPS-APAPGPP 409
>ref|ZP_00013469.1| COG0600: ABC-type nitrate/sulfonate/bicarbonate transport system,
permease component [Rhodospirillum rubrum]
Length = 569
Score = 43.1 bits (100), Expect = 0.003
Identities = 34/99 (34%), Positives = 36/99 (36%), Gaps = 1/99 (1%)
Frame = -2
Query: 521 LACPPGARSGPQRRGTGSGALPTPTWRSRSGKASR*RAASCAPAASRQRRWPAQR*GGGP 342
LA P R R G P WR R A S PAA Q W + GGP
Sbjct: 159 LAAAPARRPALSVRQHEGGDRRRPGWRHRRRIADGGGDGSGRPAAGGQLLWSDRADVGGP 218
Query: 341 SEAAHPWLVKGCPGWTAGGRG-PGTCILASSHGTGRGPG 228
+ V G PGWT G G P L H T PG
Sbjct: 219 GDGRRAVAVPGFPGWTGGMAGAPADGGLRMIHTTLARPG 257
>ref|NP_294953.1| hypothetical protein [Deinococcus radiodurans]
gi|7472709|pir||F75420 hypothetical protein -
Deinococcus radiodurans (strain R1)
gi|6458982|gb|AAF10810.1|AE001971_10 hypothetical
protein [Deinococcus radiodurans]
Length = 319
Score = 42.4 bits (98), Expect = 0.004
Identities = 54/184 (29%), Positives = 72/184 (38%), Gaps = 34/184 (18%)
Frame = +3
Query: 69 SFNSTAIPRCRSTTHFGGLPPSS*LARPLRTLQPSCRPWRWAPCAT---------YPRAP 221
S +S A R R H+G PSS + T + P R +P A+ + R+P
Sbjct: 143 SGSSCAARRKRRRRHWGSSGPSSGCSA--NTTRARHAPARSSPLASTGHSPAASGWGRSP 200
Query: 222 LATW--------SSARSV------AARQDTGPWPPSSSRPAWAAFHEPWMSCFRWTATSP 359
W SS R+ AA ++ P PPSS R A W C WT +P
Sbjct: 201 SRNWCGAARPSVSSGRATSTRCWPAASANSVPKPPSSPRSVRAGTR--W-GCCTWTPGAP 257
Query: 360 LSWPTSLATRR----------WRATRRSSA-TRLSAPRPPSRCR*RARPSSAPLRTATSS 506
+ P + TR WR T S +R ++ RPP RC ARP+ T
Sbjct: 258 AA-PRATTTRNSCSHSPSRRVWRLTTPGSTPSRPASARPPRRC---ARPAPCWRAACTCP 313
Query: 507 RRTC 518
R C
Sbjct: 314 TRCC 317
