Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003348A_C01 KCC003348A_c01
(663 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_343327.1| similar to myeloid/lymphoid or mixed-lineage le... 39 0.069
ref|ZP_00004787.1| COG0119: Isopropylmalate/homocitrate/citramal... 39 0.069
ref|NP_056128.1| Rho guanine nucleotide exchange factor (GEF) 12... 38 0.12
ref|NP_192894.1| haloacid dehalogenase-like hydrolase family [Ar... 37 0.20
gb|AAM50210.1| GH28840p [Drosophila melanogaster] 37 0.20
>ref|XP_343327.1| similar to myeloid/lymphoid or mixed-lineage leukemia 2;
ALL1-related gene [Rattus norvegicus]
Length = 5221
Score = 38.9 bits (89), Expect = 0.069
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 6/92 (6%)
Frame = +2
Query: 122 VRSGREAPVACPLRAIRSQGSRRPA-----LNGAAPL-PPSSSRPLSTPPQYAPSYVGVV 283
V+ P+ C + + +G++ A LN PL PP PLS PP+ +P+
Sbjct: 404 VQPKEPGPLQCEAKPLGREGTQLEAQLEAPLNEEMPLLPPPEESPLSPPPEESPT----- 458
Query: 284 EKVVEAEELLPLPAQESPADDPSLANPLQRME 379
EA L P P +ESP P ++P +E
Sbjct: 459 SPPPEASRLSP-PTEESPLSPPPESSPFSPLE 489
Score = 33.9 bits (76), Expect = 2.2
Identities = 22/75 (29%), Positives = 30/75 (39%)
Frame = +2
Query: 143 PVACPLRAIRSQGSRRPALNGAAPLPPSSSRPLSTPPQYAPSYVGVVEKVVEAEELLPLP 322
P PL + P + PP+ PLS PP+ +P EE P P
Sbjct: 444 PEESPLSPPPEESPTSPPPEASRLSPPTEESPLSPPPESSP--------FSPLEESPPSP 495
Query: 323 AQESPADDPSLANPL 367
A ++P P A+PL
Sbjct: 496 ALDTPLSPPPEASPL 510
Score = 32.7 bits (73), Expect = 5.0
Identities = 25/72 (34%), Positives = 34/72 (46%), Gaps = 7/72 (9%)
Frame = +2
Query: 173 SQGSRRPALNGAAPLP-------PSSSRPLSTPPQYAPSYVGVVEKVVEAEELLPLPAQE 331
S+ S P L+ +PLP P PLS PP+ +P+ EA L P P ++
Sbjct: 616 SRFSPLPVLSHLSPLPEVSRLSPPPEESPLSPPPEDSPT-----SPPPEASRLSP-PPED 669
Query: 332 SPADDPSLANPL 367
SPA P A+ L
Sbjct: 670 SPASPPPEASQL 681
Score = 32.3 bits (72), Expect = 6.5
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 206 AAPL-PPSSSRPLSTPPQYAPSYVGVVEKVVEAEELLPLPAQESPADDPSLANPL 367
A+PL PP PLS PP+ PS EA L P P +ESP P +P+
Sbjct: 507 ASPLSPPFEESPLSPPPEELPS-----SPPPEASRLSP-PPEESPMSPPPEESPM 555
>ref|ZP_00004787.1| COG0119: Isopropylmalate/homocitrate/citramalate synthases
[Rhodobacter sphaeroides]
Length = 872
Score = 38.9 bits (89), Expect = 0.069
Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Frame = +2
Query: 74 RGTQMLRGFRHTGRSLVRSGREAPVAC-PLRAIRSQGSRRPALNGAAPLPPSSSRPLSTP 250
RG+ RG R GRS+VR + AC P R+++++G RP GA+ S SR P
Sbjct: 118 RGSGARRGSRRGGRSIVRRSQHGGRACSPERSLQAEGCSRPPRVGAS----SGSRSAGDP 173
Query: 251 PQYAPSYVGVVEKVVEAEELLPLPAQESPAD 343
AP+ +G +V A +P PAD
Sbjct: 174 ---APA-LGAALRVRGAGRAVPPGRHRLPAD 200
>ref|NP_056128.1| Rho guanine nucleotide exchange factor (GEF) 12;
leukemia-associated rho guanine nucleotide exchange
factor [Homo sapiens] gi|34395525|sp|Q9NZN5|ARHC_HUMAN
Rho guanine nucleotide exchange factor 12
(Leukemia-associated RhoGEF) gi|7110160|gb|AAF36817.1|
guanine nucleotide exchange factor [Homo sapiens]
Length = 1544
Score = 38.1 bits (87), Expect = 0.12
Identities = 24/65 (36%), Positives = 36/65 (54%), Gaps = 4/65 (6%)
Frame = -1
Query: 465 SSAAGKPREIHVSALALTMMTPN----HPVDNRSIRWSGLANEGSSAGDSWAGSGSSSSA 298
+SA G+ E+ + + TP+ P D+ +R SGLANEG+ AG A S SS ++
Sbjct: 612 NSAIGRAMELQKARHPKHLSTPSSVSPEPQDSAKLRQSGLANEGTDAGYLPANSMSSVAS 671
Query: 297 STTFS 283
+FS
Sbjct: 672 GASFS 676
>ref|NP_192894.1| haloacid dehalogenase-like hydrolase family [Arabidopsis thaliana]
gi|30681816|ref|NP_849359.1| haloacid dehalogenase-like
hydrolase family [Arabidopsis thaliana]
gi|7486116|pir||T10577 hypothetical protein F25E4.190 -
Arabidopsis thaliana gi|7267857|emb|CAB78200.1| putative
protein [Arabidopsis thaliana]
gi|7321054|emb|CAB82162.1| putative protein [Arabidopsis
thaliana] gi|16648789|gb|AAL25585.1| AT4g11570/F25E4_190
[Arabidopsis thaliana] gi|20466125|gb|AAM19984.1|
AT4g11570/F25E4_190 [Arabidopsis thaliana]
gi|24030331|gb|AAN41332.1| unknown protein [Arabidopsis
thaliana]
Length = 373
Score = 37.4 bits (85), Expect = 0.20
Identities = 16/27 (59%), Positives = 18/27 (66%)
Frame = +2
Query: 329 ESPADDPSLANPLQRMERLSTGWFGVI 409
E+ AD PSL NPL R ER+ GW G I
Sbjct: 105 ENKADKPSLHNPLLRQERMGCGWLGAI 131
>gb|AAM50210.1| GH28840p [Drosophila melanogaster]
Length = 1272
Score = 37.4 bits (85), Expect = 0.20
Identities = 26/75 (34%), Positives = 34/75 (44%), Gaps = 1/75 (1%)
Frame = +2
Query: 119 LVRSGREAPVACPLRAIRSQGSRRPALNGAAP-LPPSSSRPLSTPPQYAPSYVGVVEKVV 295
+V +GR+ P P S+ S P +P LPP +S LS PP +PS
Sbjct: 280 IVTAGRKQPPPPPASPSPSRSSSLPPPASPSPSLPPPASPSLSLPPPASPSPSPSPPPPA 339
Query: 296 EAEELLPLPAQESPA 340
EA P+PA PA
Sbjct: 340 EATAPAPVPAAAQPA 354
