Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC003347A_C01 KCC003347A_c01
(474 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||E72701 hypothetical protein APE1028 - Aeropyrum pernix (str... 42 0.004
ref|ZP_00018510.1| hypothetical protein [Chloroflexus aurantiacus] 35 0.59
gb|AAH45499.1| Similar to CCR4-NOT transcription complex, subuni... 35 0.59
gb|AAQ91227.1| CCR4-NOT transcription complex, subunit 3 [Danio ... 35 0.59
ref|NP_045362.1| product of latency-related gene [Bovine herpesv... 34 1.0
>pir||E72701 hypothetical protein APE1028 - Aeropyrum pernix (strain K1)
gi|5104698|dbj|BAA80013.1| 113aa long hypothetical
protein [Aeropyrum pernix]
Length = 113
Score = 42.0 bits (97), Expect = 0.004
Identities = 29/91 (31%), Positives = 35/91 (37%)
Frame = -2
Query: 413 RSASGRRRYVTSLGSGATDACRPLMPWLVKPGCDLIGNRSNILQVHSPRCAGGGRSQRRK 234
R G RR + S AT R W+ + L +R++ L H GG RK
Sbjct: 16 RLKPGPRRLLCSTAPAATAMARVKSAWVARRTGFLAASRASFLTSHRKALGTGGHLPSRK 75
Query: 233 DHP*RCRASSLSSAEAPGSGPHGGPPSPGHP 141
P S APGSG GG S G P
Sbjct: 76 PRPAARPGGCRPSTPAPGSGAPGGGLSSGGP 106
>ref|ZP_00018510.1| hypothetical protein [Chloroflexus aurantiacus]
Length = 765
Score = 34.7 bits (78), Expect = 0.59
Identities = 21/60 (35%), Positives = 31/60 (51%)
Frame = +3
Query: 216 ASSRVILAPLASSTASTSGRVHLQDVAPVTNQIAAGLHKPGHQRTARISCAAAQRGHVAS 395
A + +LAP + T T LQ +AP TN+ AGL+ PG + A Q+G +A+
Sbjct: 409 AELQALLAPPDAETQQT-----LQRLAPFTNRAIAGLYPPGSTVKQFVGAVALQQGIIAA 463
>gb|AAH45499.1| Similar to CCR4-NOT transcription complex, subunit 3 [Danio rerio]
Length = 908
Score = 34.7 bits (78), Expect = 0.59
Identities = 26/106 (24%), Positives = 48/106 (44%)
Frame = +3
Query: 153 GRRATMRAGAGRLSAAERACAASSRVILAPLASSTASTSGRVHLQDVAPVTNQIAAGLHK 332
G +++ + + LS++ ++ S + +A LASS +S SG L V Q +
Sbjct: 301 GNQSSSLSSSSSLSSSSSGASSISLISMATLASSGSSASGSSSLLGNISVPLQNSGSYSS 360
Query: 333 PGHQRTARISCAAAQRGHVASTSTSTSSVPSQFILLTECGSPPSAA 470
Q+T + + +S S STS+ S + + SPP+ +
Sbjct: 361 ATQQQTQQSQQQHQPKNSASSHSNSTSASNSILLPTSASTSPPNTS 406
>gb|AAQ91227.1| CCR4-NOT transcription complex, subunit 3 [Danio rerio]
Length = 847
Score = 34.7 bits (78), Expect = 0.59
Identities = 26/106 (24%), Positives = 48/106 (44%)
Frame = +3
Query: 153 GRRATMRAGAGRLSAAERACAASSRVILAPLASSTASTSGRVHLQDVAPVTNQIAAGLHK 332
G +++ + + LS++ ++ S + +A LASS +S SG L V Q +
Sbjct: 299 GNQSSSLSSSSSLSSSSSGASSISLISMATLASSGSSASGSSSLLGNISVPLQNSGSYSS 358
Query: 333 PGHQRTARISCAAAQRGHVASTSTSTSSVPSQFILLTECGSPPSAA 470
Q+T + + +S S STS+ S + + SPP+ +
Sbjct: 359 ATQQQTQQSQQQHQPKNSASSHSNSTSASNSILLPTSTSTSPPNTS 404
>ref|NP_045362.1| product of latency-related gene [Bovine herpesvirus 1]
gi|330765|gb|AAA46059.1| latency-related open reading
frame 2; putative gi|2653351|emb|CAA06137.1| product of
latency-related gene [Bovine herpesvirus type 1.1
(strain Cooper)]
Length = 181
Score = 33.9 bits (76), Expect = 1.0
Identities = 29/92 (31%), Positives = 33/92 (35%), Gaps = 19/92 (20%)
Frame = -2
Query: 365 ATDACRPLMPWLVKPGCDLIGNRSNILQVHSPRCAGGGRS----QRRKDHP*RCRASSLS 198
A CR +PG G + PRC GGG R+ P RC ASS
Sbjct: 63 AARRCRRCSGRAARPGS---GPGDRLAAAPGPRCCGGGSPGGFLAPRRPLPFRCAASSAP 119
Query: 197 S---------------AEAPGSGPHGGPPSPG 147
S A +PG G H G P PG
Sbjct: 120 SSRGRGPGRPAPWRSLAFSPGRGCHCGRPRPG 151
