KCC003343A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003343A_C01 KCC003343A_c01
gaaggtcctgcgcctggatggcacaaccagcaaggatgtgaagggaAAGAAGGAGGGCGG
TGCGCCCGGCGGCAACCTGTCGCTCAACCAGACGCTGGAGGGGCACAATGCGGCTGTGAT
CTGCGTGTGCTGGAACAATGCGTTCCAGAAGCTCACCACTAGCGATGAGTTCGGACTCAT
CATTGTGTGGATGCTGCACAAGGGCATGTGGTTCGAGGAGATGATCAACAACCGCAACAA
GTCCGTGGTGAAGGACATGAAGTGGACGTCAAACGGCGAGAAGATTTGCATTGTGTACGA
GGATGGAGCCGTCATCGTGGGCTCCGTGGATGGAAACCGCCTGTGGGGCAAGGAGCTGGG
CATGGACACTGGAGCTAGTGGAGTGATCGCCCGACGGTCGCCTGCTGCTGTTCGCCACGC
CCGGCGGTGAGTGCCACGTGTACGACG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003343A_C01 KCC003343A_c01
         (447 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAH56925.1| 4930459M12Rik protein [Mus musculus]                   164  4e-42
dbj|BAC39081.1| unnamed protein product [Mus musculus]                164  4e-42
ref|NP_766058.1| similar to KIAA1336 protein [Mus musculus] gi|2...   164  4e-42
dbj|BAB29866.1| unnamed protein product [Mus musculus]                164  4e-42
dbj|BAC27232.1| unnamed protein product [Mus musculus]                164  4e-42

>gb|AAH56925.1| 4930459M12Rik protein [Mus musculus]
          Length = 1181

 Score =  164 bits (415), Expect(2) = 4e-42
 Identities = 80/119 (67%), Positives = 93/119 (77%)
 Frame = +2

Query: 2   KVLRLDGTTSKDVKGKKEGGAPGGNLSLNQTLEGHNAAVICVCWNNAFQKLTTSDEFGLI 181
           KVLRL+  T      K  G A   NLS+NQ LEGH+ AV  V WN  +QKLTTSD+ GLI
Sbjct: 39  KVLRLETQTDDS---KLRGLAAPSNLSMNQNLEGHSGAVQVVTWNEQYQKLTTSDQNGLI 95

Query: 182 IVWMLHKGMWFEEMINNRNKSVVKDMKWTSNGEKICIVYEDGAVIVGSVDGNRLWGKEL 358
           IVWML+KG W+EEMINNRNKSVV+ M W ++G+KICIVYEDGAVIVGSVDGNR+WGK+L
Sbjct: 96  IVWMLYKGSWYEEMINNRNKSVVRSMSWNADGQKICIVYEDGAVIVGSVDGNRIWGKDL 154

 Score = 27.3 bits (59), Expect(2) = 4e-42
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +3

Query: 387 SPDGRLLLFATPGGECHVYD 446
           S D ++LLF    GE H+YD
Sbjct: 165 SADSKILLFGMANGEIHIYD 184

>dbj|BAC39081.1| unnamed protein product [Mus musculus]
          Length = 1170

 Score =  164 bits (415), Expect(2) = 4e-42
 Identities = 80/119 (67%), Positives = 93/119 (77%)
 Frame = +2

Query: 2   KVLRLDGTTSKDVKGKKEGGAPGGNLSLNQTLEGHNAAVICVCWNNAFQKLTTSDEFGLI 181
           KVLRL+  T      K  G A   NLS+NQ LEGH+ AV  V WN  +QKLTTSD+ GLI
Sbjct: 39  KVLRLETQTDDS---KLRGLAAPSNLSMNQNLEGHSGAVQVVTWNEQYQKLTTSDQNGLI 95

Query: 182 IVWMLHKGMWFEEMINNRNKSVVKDMKWTSNGEKICIVYEDGAVIVGSVDGNRLWGKEL 358
           IVWML+KG W+EEMINNRNKSVV+ M W ++G+KICIVYEDGAVIVGSVDGNR+WGK+L
Sbjct: 96  IVWMLYKGSWYEEMINNRNKSVVRSMSWNADGQKICIVYEDGAVIVGSVDGNRIWGKDL 154

 Score = 27.3 bits (59), Expect(2) = 4e-42
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +3

Query: 387 SPDGRLLLFATPGGECHVYD 446
           S D ++LLF    GE H+YD
Sbjct: 165 SADSKILLFGMANGEIHIYD 184

>ref|NP_766058.1| similar to KIAA1336 protein [Mus musculus]
           gi|26325818|dbj|BAC26663.1| unnamed protein product [Mus
           musculus]
          Length = 1170

 Score =  164 bits (415), Expect(2) = 4e-42
 Identities = 80/119 (67%), Positives = 93/119 (77%)
 Frame = +2

Query: 2   KVLRLDGTTSKDVKGKKEGGAPGGNLSLNQTLEGHNAAVICVCWNNAFQKLTTSDEFGLI 181
           KVLRL+  T      K  G A   NLS+NQ LEGH+ AV  V WN  +QKLTTSD+ GLI
Sbjct: 39  KVLRLETQTDDS---KLRGLAAPSNLSMNQNLEGHSGAVQVVTWNEQYQKLTTSDQNGLI 95

Query: 182 IVWMLHKGMWFEEMINNRNKSVVKDMKWTSNGEKICIVYEDGAVIVGSVDGNRLWGKEL 358
           IVWML+KG W+EEMINNRNKSVV+ M W ++G+KICIVYEDGAVIVGSVDGNR+WGK+L
Sbjct: 96  IVWMLYKGSWYEEMINNRNKSVVRSMSWNADGQKICIVYEDGAVIVGSVDGNRIWGKDL 154

 Score = 27.3 bits (59), Expect(2) = 4e-42
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +3

Query: 387 SPDGRLLLFATPGGECHVYD 446
           S D ++LLF    GE H+YD
Sbjct: 165 SADSKILLFGMANGEIHIYD 184

>dbj|BAB29866.1| unnamed protein product [Mus musculus]
          Length = 452

 Score =  164 bits (415), Expect(2) = 4e-42
 Identities = 80/119 (67%), Positives = 93/119 (77%)
 Frame = +2

Query: 2   KVLRLDGTTSKDVKGKKEGGAPGGNLSLNQTLEGHNAAVICVCWNNAFQKLTTSDEFGLI 181
           KVLRL+  T      K  G A   NLS+NQ LEGH+ AV  V WN  +QKLTTSD+ GLI
Sbjct: 39  KVLRLETQTDDS---KLRGLAAPSNLSMNQNLEGHSGAVQVVTWNEQYQKLTTSDQNGLI 95

Query: 182 IVWMLHKGMWFEEMINNRNKSVVKDMKWTSNGEKICIVYEDGAVIVGSVDGNRLWGKEL 358
           IVWML+KG W+EEMINNRNKSVV+ M W ++G+KICIVYEDGAVIVGSVDGNR+WGK+L
Sbjct: 96  IVWMLYKGSWYEEMINNRNKSVVRSMSWNADGQKICIVYEDGAVIVGSVDGNRIWGKDL 154

 Score = 27.3 bits (59), Expect(2) = 4e-42
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +3

Query: 387 SPDGRLLLFATPGGECHVYD 446
           S D ++LLF    GE H+YD
Sbjct: 165 SADSKILLFGMANGEIHIYD 184

>dbj|BAC27232.1| unnamed protein product [Mus musculus]
          Length = 412

 Score =  164 bits (415), Expect(2) = 4e-42
 Identities = 80/119 (67%), Positives = 93/119 (77%)
 Frame = +2

Query: 2   KVLRLDGTTSKDVKGKKEGGAPGGNLSLNQTLEGHNAAVICVCWNNAFQKLTTSDEFGLI 181
           KVLRL+  T      K  G A   NLS+NQ LEGH+ AV  V WN  +QKLTTSD+ GLI
Sbjct: 39  KVLRLETQTDDS---KLRGLAAPSNLSMNQNLEGHSGAVQVVTWNEQYQKLTTSDQNGLI 95

Query: 182 IVWMLHKGMWFEEMINNRNKSVVKDMKWTSNGEKICIVYEDGAVIVGSVDGNRLWGKEL 358
           IVWML+KG W+EEMINNRNKSVV+ M W ++G+KICIVYEDGAVIVGSVDGNR+WGK+L
Sbjct: 96  IVWMLYKGSWYEEMINNRNKSVVRSMSWNADGQKICIVYEDGAVIVGSVDGNRIWGKDL 154

 Score = 27.3 bits (59), Expect(2) = 4e-42
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +3

Query: 387 SPDGRLLLFATPGGECHVYD 446
           S D ++LLF    GE H+YD
Sbjct: 165 SADSKILLFGMANGEIHIYD 184



EST assemble image


clone accession position
1 MXL067g04_r BP096958 1 393
2 LCL099c04_r AV631754 47 447




Chlamydomonas reinhardtii
Kazusa DNA Research Institute