KCC003340A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC003340A_C01 KCC003340A_c01
taaccccttaacagagaaattaatgatatagcagcgaccttcccCCGCCTAGCACCCTAG
TTTCGCCCTAGAACTATGGAGGACCTTGCGGCCCTTAGCAAGGAGGAGCTTCTGGTGAAA
TACAAGAAGCTCAAGGACCAGGCGGACTACGAGCGCCGGCGAGCAGATGGTCTTGCAGAG
GATCTCAGGCTCGCTCGCGAGCACAACATTGCGGTGCAAAAGCAAATTGAGCAAGAGGAG
GAGTACATCACCAACAAGCTGATGAAGCGCCTGGACCAACTCAAACGGGAGAAGGCGGTG
CTTGCCTCGGAGGTGGCGCAAGAGGAGGAATTCCTGACCAACACCCTGCAGAAGCGGCTG
GATAAGCTGGCCAAGGAGAAGGTGGACCTGGAGAACAGGCTGGAGGCGGAGCAGGAGTAC
GTGGTCAACAAGCTGCGCAAGGCCATTGAGCAGCTCAGTGTGGAGAAGAGCAAGCTGATG
AGCGAGAAGGTGGAGCTGGAGAACCAGCTGGAGTGCGAGC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC003340A_C01 KCC003340A_c01
         (520 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|XP_315910.1| ENSANGP00000013465 [Anopheles gambiae] gi|30175...   108  4e-23
ref|NP_648944.1| CG6664-PA [Drosophila melanogaster] gi|24665711...   106  2e-22
gb|AAN71041.1| AT08590p [Drosophila melanogaster]                     106  2e-22
gb|AAH45133.1| Similar to DNA segment on chromosome 10 (unique) ...   101  5e-21
gb|AAH47810.1| Similar to DNA segment on chromosome 10 (unique) ...   101  7e-21

>ref|XP_315910.1| ENSANGP00000013465 [Anopheles gambiae] gi|30175828|gb|EAA11792.2|
           ENSANGP00000013465 [Anopheles gambiae str. PEST]
          Length = 437

 Score =  108 bits (270), Expect = 4e-23
 Identities = 64/146 (43%), Positives = 89/146 (60%), Gaps = 7/146 (4%)
 Frame = +1

Query: 103 EELLVKYKKLKDQADYERRRADGLAEDLRLAREHNIAVQKQIEQEEEYITNKLMKRLDQL 282
           E L  + K LK + +  + R   + E+ R  R+ ++ +Q + EQEEEYI+N L+K++  L
Sbjct: 32  ESLTQQNKVLKVELETYKIRVKVIQEENRALRQASVIIQAKAEQEEEYISNTLLKKIQAL 91

Query: 283 KREKAVLASEVAQEEEFLTNTLQKRLDKLAKEKVDLENRLEAEQEYVVNKLRKAIEQLSV 462
           K+EK  LA    +EEE LTN L ++LD+L +EK  LE  LE EQE +VNKL + IE+L  
Sbjct: 92  KKEKETLAHHYEREEECLTNDLSRKLDQLRQEKCKLEQTLEQEQECLVNKLMRKIEKLEA 151

Query: 463 EKS-------KLMSEKVELENQLECE 519
           E S       +L  E VELEN LE E
Sbjct: 152 ETSAKQNHLEQLRREMVELENTLEQE 177

 Score = 57.8 bits (138), Expect = 8e-08
 Identities = 40/121 (33%), Positives = 63/121 (52%), Gaps = 22/121 (18%)
 Frame = +1

Query: 109 LLVKYKKLKDQAD-----YERRR---ADGLAEDLRLAREHNIAVQKQIEQEEEYITNKLM 264
           LL K + LK + +     YER      + L+  L   R+    +++ +EQE+E + NKLM
Sbjct: 84  LLKKIQALKKEKETLAHHYEREEECLTNDLSRKLDQLRQEKCKLEQTLEQEQECLVNKLM 143

Query: 265 KR--------------LDQLKREKAVLASEVAQEEEFLTNTLQKRLDKLAKEKVDLENRL 402
           ++              L+QL+RE   L + + QE+E L N L KR+DKL  EK  L+ +L
Sbjct: 144 RKIEKLEAETSAKQNHLEQLRREMVELENTLEQEQEALVNKLWKRMDKLEAEKRSLQIKL 203

Query: 403 E 405
           +
Sbjct: 204 D 204

 Score = 39.7 bits (91), Expect = 0.023
 Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 1/151 (0%)
 Frame = +1

Query: 70  RTMEDLAALSKEELLVKYKKLKDQADYERRRADGLAEDLRLAREHNIAVQKQIEQEEEYI 249
           +T+E        +L+ K +KL+ +   ++   + L  ++       + ++  +EQE+E +
Sbjct: 129 QTLEQEQECLVNKLMRKIEKLEAETSAKQNHLEQLRREM-------VELENTLEQEQEAL 181

Query: 250 TNKLMKRLDQLKREKAVLASEVAQEEEFLTNTLQKRLDKLAKEK-VDLENRLEAEQEYVV 426
            NKL KR+D+L+ EK  L  ++  ++     T  K +     E   D   +L A     +
Sbjct: 182 VNKLWKRMDKLEAEKRSL--QIKLDQPVSDPTSPKEISHHRNENGNDTATQLTAH----I 235

Query: 427 NKLRKAIEQLSVEKSKLMSEKVELENQLECE 519
             LR  ++QL    +    E  E   Q   E
Sbjct: 236 TNLRSEVDQLRSNLAAAEKESKEKTQQFAHE 266

>ref|NP_648944.1| CG6664-PA [Drosophila melanogaster] gi|24665711|ref|NP_730232.1|
           CG6664-PB [Drosophila melanogaster]
           gi|24665715|ref|NP_730233.1| CG6664-PC [Drosophila
           melanogaster] gi|7294028|gb|AAF49384.1| CG6664-PA
           [Drosophila melanogaster] gi|17862364|gb|AAL39659.1|
           LD23434p [Drosophila melanogaster]
           gi|23093287|gb|AAN11727.1| CG6664-PB [Drosophila
           melanogaster] gi|23093288|gb|AAN11728.1| CG6664-PC
           [Drosophila melanogaster]
          Length = 532

 Score =  106 bits (265), Expect = 2e-22
 Identities = 62/146 (42%), Positives = 88/146 (59%), Gaps = 7/146 (4%)
 Frame = +1

Query: 103 EELLVKYKKLKDQADYERRRADGLAEDLRLAREHNIAVQKQIEQEEEYITNKLMKRLDQL 282
           E L  + K LK + D  + +   + E+ R  ++ ++ +Q + EQEEEYI+N L+K++  L
Sbjct: 32  ESLTQQNKVLKAELDTFKTKCKVVQEENRCLKQASVIIQAKAEQEEEYISNTLLKKIQAL 91

Query: 283 KREKAVLASEVAQEEEFLTNTLQKRLDKLAKEKVDLENRLEAEQEYVVNKLRKAIEQLSV 462
           K+EK  LA    +EEE LTN L ++LD+L +EK  LE  LE EQE +VNKL + IE+L  
Sbjct: 92  KKEKETLAHHYEREEECLTNDLSRKLDQLRQEKCKLEQTLEQEQECLVNKLMRKIEKLQA 151

Query: 463 EK-------SKLMSEKVELENQLECE 519
           E         +L  E VELEN LE E
Sbjct: 152 ETDNKQTNLEQLRREMVELENTLEQE 177

 Score = 57.8 bits (138), Expect = 8e-08
 Identities = 40/121 (33%), Positives = 63/121 (52%), Gaps = 22/121 (18%)
 Frame = +1

Query: 109 LLVKYKKLKDQAD-----YERRR---ADGLAEDLRLAREHNIAVQKQIEQEEEYITNKLM 264
           LL K + LK + +     YER      + L+  L   R+    +++ +EQE+E + NKLM
Sbjct: 84  LLKKIQALKKEKETLAHHYEREEECLTNDLSRKLDQLRQEKCKLEQTLEQEQECLVNKLM 143

Query: 265 KR--------------LDQLKREKAVLASEVAQEEEFLTNTLQKRLDKLAKEKVDLENRL 402
           ++              L+QL+RE   L + + QE+E L N L KR+DKL  EK  L+ +L
Sbjct: 144 RKIEKLQAETDNKQTNLEQLRREMVELENTLEQEQEALVNKLWKRMDKLETEKRSLQIKL 203

Query: 403 E 405
           +
Sbjct: 204 D 204

 Score = 40.4 bits (93), Expect = 0.014
 Identities = 23/84 (27%), Positives = 46/84 (54%)
 Frame = +1

Query: 70  RTMEDLAALSKEELLVKYKKLKDQADYERRRADGLAEDLRLAREHNIAVQKQIEQEEEYI 249
           +T+E        +L+ K +KL+ + D ++   + L  ++       + ++  +EQE+E +
Sbjct: 129 QTLEQEQECLVNKLMRKIEKLQAETDNKQTNLEQLRREM-------VELENTLEQEQEAL 181

Query: 250 TNKLMKRLDQLKREKAVLASEVAQ 321
            NKL KR+D+L+ EK  L  ++ Q
Sbjct: 182 VNKLWKRMDKLETEKRSLQIKLDQ 205

>gb|AAN71041.1| AT08590p [Drosophila melanogaster]
          Length = 571

 Score =  106 bits (265), Expect = 2e-22
 Identities = 62/146 (42%), Positives = 88/146 (59%), Gaps = 7/146 (4%)
 Frame = +1

Query: 103 EELLVKYKKLKDQADYERRRADGLAEDLRLAREHNIAVQKQIEQEEEYITNKLMKRLDQL 282
           E L  + K LK + D  + +   + E+ R  ++ ++ +Q + EQEEEYI+N L+K++  L
Sbjct: 71  ESLTQQNKVLKAELDTFKTKCKVVQEENRCLKQASVIIQAKAEQEEEYISNTLLKKIQAL 130

Query: 283 KREKAVLASEVAQEEEFLTNTLQKRLDKLAKEKVDLENRLEAEQEYVVNKLRKAIEQLSV 462
           K+EK  LA    +EEE LTN L ++LD+L +EK  LE  LE EQE +VNKL + IE+L  
Sbjct: 131 KKEKETLAHHYEREEECLTNDLSRKLDQLRQEKCKLEQTLEQEQECLVNKLMRKIEKLQA 190

Query: 463 EK-------SKLMSEKVELENQLECE 519
           E         +L  E VELEN LE E
Sbjct: 191 ETDNKQTNLEQLRREMVELENTLEQE 216

 Score = 57.8 bits (138), Expect = 8e-08
 Identities = 40/121 (33%), Positives = 63/121 (52%), Gaps = 22/121 (18%)
 Frame = +1

Query: 109 LLVKYKKLKDQAD-----YERRR---ADGLAEDLRLAREHNIAVQKQIEQEEEYITNKLM 264
           LL K + LK + +     YER      + L+  L   R+    +++ +EQE+E + NKLM
Sbjct: 123 LLKKIQALKKEKETLAHHYEREEECLTNDLSRKLDQLRQEKCKLEQTLEQEQECLVNKLM 182

Query: 265 KR--------------LDQLKREKAVLASEVAQEEEFLTNTLQKRLDKLAKEKVDLENRL 402
           ++              L+QL+RE   L + + QE+E L N L KR+DKL  EK  L+ +L
Sbjct: 183 RKIEKLQAETDNKQTNLEQLRREMVELENTLEQEQEALVNKLWKRMDKLETEKRSLQIKL 242

Query: 403 E 405
           +
Sbjct: 243 D 243

 Score = 40.4 bits (93), Expect = 0.014
 Identities = 23/84 (27%), Positives = 46/84 (54%)
 Frame = +1

Query: 70  RTMEDLAALSKEELLVKYKKLKDQADYERRRADGLAEDLRLAREHNIAVQKQIEQEEEYI 249
           +T+E        +L+ K +KL+ + D ++   + L  ++       + ++  +EQE+E +
Sbjct: 168 QTLEQEQECLVNKLMRKIEKLQAETDNKQTNLEQLRREM-------VELENTLEQEQEAL 220

Query: 250 TNKLMKRLDQLKREKAVLASEVAQ 321
            NKL KR+D+L+ EK  L  ++ Q
Sbjct: 221 VNKLWKRMDKLETEKRSLQIKLDQ 244

>gb|AAH45133.1| Similar to DNA segment on chromosome 10 (unique) 170 [Xenopus
           laevis]
          Length = 435

 Score =  101 bits (252), Expect = 5e-21
 Identities = 61/152 (40%), Positives = 91/152 (59%), Gaps = 7/152 (4%)
 Frame = +1

Query: 85  LAALSKEELLVKYKKLKDQADYERRRADGLAEDLRLAREHNIAVQKQIEQEEEYITNKLM 264
           LA+L +E      K LK + +  + +   L E+ R  R+ ++ +Q + EQEEE+I+N L 
Sbjct: 30  LASLQQEN-----KVLKIELETYKLKCKALMEENRDLRKASVTIQARAEQEEEFISNTLF 84

Query: 265 KRLDQLKREKAVLASEVAQEEEFLTNTLQKRLDKLAKEKVDLENRLEAEQEYVVNKLRKA 444
           K++  L++EK  LA    +EEEFLTN L ++L +L  EK +LE  LE EQE+ VNKL K 
Sbjct: 85  KKIQALQKEKETLAVNYEKEEEFLTNELSRKLMQLQHEKAELEQHLEQEQEFQVNKLMKK 144

Query: 445 IEQL-------SVEKSKLMSEKVELENQLECE 519
           I++L        +   +L  EK++LEN LE E
Sbjct: 145 IKKLENDTISKQLTLEQLRREKIDLENTLEQE 176

 Score = 44.7 bits (104), Expect = 7e-04
 Identities = 38/152 (25%), Positives = 71/152 (46%), Gaps = 14/152 (9%)
 Frame = +1

Query: 106 ELLVKYKKLKDQADYERRRADGLAEDLRLA--REHNIAVQKQIEQEEEYITNKLMKRLDQ 279
           +L+ K KKL++         D +++ L L   R   I ++  +EQE+E + N+L KR+D+
Sbjct: 140 KLMKKIKKLEN---------DTISKQLTLEQLRREKIDLENTLEQEQEALVNRLWKRMDK 190

Query: 280 LKREKAVLASEVAQE------------EEFLTNTLQKRLDKLAKEKVDLENRLEAEQEYV 423
           L+ EK +L  ++ Q             E      + + +  L  E   L+ +L A Q   
Sbjct: 191 LEAEKRILQEKLDQPVSAPPSPRDISMEIDSPENMMRHIRYLKNEVERLKKQLRAAQLQH 250

Query: 424 VNKLRKAIEQLSVEKSKLMSEKVELENQLECE 519
             K+ + +E    E+  +  E + L+ +L+ E
Sbjct: 251 TEKMAQYLE----EERHMREENLRLQRKLQWE 278

>gb|AAH47810.1| Similar to DNA segment on chromosome 10 (unique) 170 [Danio rerio]
          Length = 436

 Score =  101 bits (251), Expect = 7e-21
 Identities = 61/152 (40%), Positives = 91/152 (59%), Gaps = 7/152 (4%)
 Frame = +1

Query: 85  LAALSKEELLVKYKKLKDQADYERRRADGLAEDLRLAREHNIAVQKQIEQEEEYITNKLM 264
           LA+L +E      K LK + +  + +   L E+ R  R+ ++ +Q + EQEEE+I+N L 
Sbjct: 39  LASLQQEN-----KVLKIELETFKLKCKALQEENRDLRKASVTIQARAEQEEEFISNTLF 93

Query: 265 KRLDQLKREKAVLASEVAQEEEFLTNTLQKRLDKLAKEKVDLENRLEAEQEYVVNKLRKA 444
           K++  L++EK  LA    +EEEFLTN L ++L +L  EK +LE  LE EQE+ VNKL K 
Sbjct: 94  KKIQALQKEKETLAVNYEKEEEFLTNELSRKLMQLQHEKAELEQHLEQEQEFQVNKLMKK 153

Query: 445 IEQL-------SVEKSKLMSEKVELENQLECE 519
           I++L        +   +L  EK++LEN LE E
Sbjct: 154 IKKLENDTISKQLTLEQLRREKIDLENTLEQE 185

 Score = 40.8 bits (94), Expect = 0.011
 Identities = 34/142 (23%), Positives = 70/142 (48%), Gaps = 4/142 (2%)
 Frame = +1

Query: 106 ELLVKYKKLKDQADYERRRADGLAEDLRLA--REHNIAVQKQIEQEEEYITNKLMKRLDQ 279
           +L+ K KKL++         D +++ L L   R   I ++  +EQE+E + N+L KR+D+
Sbjct: 149 KLMKKIKKLEN---------DTISKQLTLEQLRREKIDLENTLEQEQEALVNRLWKRMDK 199

Query: 280 LKREKAVLASEVAQEEEFLTNTLQKRLDKLAKEKVDLENRLEAEQ--EYVVNKLRKAIEQ 453
           L+ EK +L  ++ Q      +      D ++ E    EN +   +  +  V +L+K +  
Sbjct: 200 LEAEKRILQEKLDQP----VSAPPSPRDTISMEIDSPENMMRHIRFLKSEVERLKKNLRT 255

Query: 454 LSVEKSKLMSEKVELENQLECE 519
             ++ ++  ++ +E E  +  E
Sbjct: 256 SELQHTEKRAQYIEEERHMREE 277



EST assemble image


clone accession position
1 LCL098g11_r AV631726 1 399
2 LCL098b04_r AV631681 45 520




Chlamydomonas reinhardtii
Kazusa DNA Research Institute